mRNA_F-serratus_M_contig1013.224.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1013.224.1
Unique NamemRNA_F-serratus_M_contig1013.224.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1013.224.1 vs. uniprot
Match: D7FK62_ECTSI (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK62_ECTSI)

HSP 1 Score: 373 bits (957), Expect = 8.680e-126
Identity = 206/344 (59.88%), Postives = 236/344 (68.60%), Query Frame = 1
Query:   73 MNLGMRG-PLS-------VRSQLLHLASLSGRATATVRTSLRSRLKSPAVSCPLQSPPCSCTFVTRSSERVTAATAG------ADYTVSGSPEKRILYGGHQPISPWQRVAIAGWSAVSALRDPGRGDMVAALGEVTGKLALERLYRIMLADPEGAEIVGSKPVINEGTVDLSALAALPEGTFGKSYSNFMEGNKFSPDSRSPVKFVDDDDLAYVMRRYREVHDFWHVLSGLPPTVEGELALKWFELVQTGLPMCALGAVFGPLALPQREPPP--------------------REVLARTYVPWALRAGRSTRKPLMCVWYERRWEEPLEQVRKDLGFKVAPQR 1002
            MNL MRG PLS        R+    L S    +TA   T   +   S A S P  SP          S R  + T G      A+ T SG   KR+LY GHQP SP QR A+AGW+ V+AL DP R DMVA LGEVTG+LALE+LYR MLADPEG EI+ ++PVINE TVDL+ALAALP+GT GKSYSNFM+ N FSPD RSPVK+VDD DLAYVMRRYREVHD WH L+GLP TVEGELALKWFELVQTGLP+CAL AV GPLALP +EPP                     REVLART+VPWA+RAGR  R+PL+CVWYE+RWE+PLE VR+DLG ++APQR
Sbjct:    1 MNLAMRGSPLSSGAIRRLARAPTPSLQSAPRFSTACGFTPTSASRLSAAAS-PRPSP------FQHGSRRPASTTIGSGDSTTANTTASGPAAKRVLYSGHQPTSPLQRTAMAGWATVTALMDPERADMVATLGEVTGRLALEQLYRSMLADPEGREILRARPVINEATVDLAALAALPDGTLGKSYSNFMKENNFSPDGRSPVKYVDDPDLAYVMRRYREVHDLWHALTGLPATVEGELALKWFELVQTGLPVCALSAVLGPLALPSKEPPAPTTTPSXXXSSGSGRKRRGSREVLARTFVPWAIRAGRRARRPLVCVWYEKRWEQPLELVRRDLGVEMAPQR 337          
BLAST of mRNA_F-serratus_M_contig1013.224.1 vs. uniprot
Match: A0A835Z0M6_9STRA (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0M6_9STRA)

HSP 1 Score: 276 bits (705), Expect = 4.630e-89
Identity = 137/245 (55.92%), Postives = 175/245 (71.43%), Query Frame = 1
Query:  265 AATAGADYTVSGSPEKRILYGGHQPISPWQRVAIAGWSAVSALRDPGRGDMVAALGEVTGKLALERLYRIMLADPEGAEIVGSKPVINEGTVDLSALAALPEGTFGKSYSNFMEGNKFSPDSRSPVKFVDDDDLAYVMRRYREVHDFWHVLSGLPPTVEGELALKWFELVQTGLPMCALGAVFGPLALPQREPPPREVLARTYVPWALRAGRSTRKPLMCVWYERRWEEPLEQVRKDLGFKVAPQ 999
            A +  +  + +G P KRILY GH PISP QRV +   SA SA  DP R DMVAALGE TG  AL++++  ML DP+G E++  +P ++E +VDL AL  LP GTFGK+Y++FM  N+F+PDSR PV+FVDD DLAYVM RYR+VHD WHVLSGLPP++EGE+ALKWFE+VQTGLP+ A+ A+ G   +P+     R  L +  VPWA+RAGR +  PLM VWYER W+  L   R+ L F+ APQ
Sbjct:    5 AGSTSSSKSAAGEPCKRILYKGHNPISPSQRVGLTFISAFSAFADPERADMVAALGETTGHRALKQMHHRMLQDPDGIELLRERPQLDEHSVDLEALGQLPSGTFGKAYADFMAHNQFTPDSRLPVRFVDDADLAYVMARYRQVHDLWHVLSGLPPSLEGEIALKWFEMVQTGLPVAAISALVGAARVPREG---RAALRQKLVPWAIRAGRRS-VPLMNVWYERYWDMYLSNFREKLKFEPAPQ 245          
BLAST of mRNA_F-serratus_M_contig1013.224.1 vs. uniprot
Match: W7U2W9_9STRA (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U2W9_9STRA)

HSP 1 Score: 264 bits (675), Expect = 1.320e-83
Identity = 138/260 (53.08%), Postives = 177/260 (68.08%), Query Frame = 1
Query:  220 PCSCTFVT-RSSERVTAATAGADYTVSGSPEKRILYGGHQPISPWQRVAIAGWSAVSALRDPGRGDMVAALGEVTGKLALERLYRIMLADPEGAEIVGSKPVINEGTVDLSALAALPEGTFGKSYSNFMEGNKFSPDSRSPVKFVDDDDLAYVMRRYREVHDFWHVLSGLPPTVEGELALKWFELVQTGLPMCALGAVFGPLALPQREPPPREVLARTYVPWALRAGRSTRKPLMCVWYERRWEEPLEQVRKDLGFKVAP 996
            PC+ TF   R     ++ ++G   T   +  +  LY  H P S +Q++ IAG+SA +A RDP RGDMVAALGE TG  AL+RL R M ADP G E++ +KP I E +     L  LPEGTFG+ Y+ F++ + +SPD R+ V+FVDD +LA+VM+RYR+VHDFWHVL GLPPTV GELALKWFE+VQT LP+ A   V GPL+L  +E   R++L   Y+PWA+RA    R PLMCVWYER +EEPLE +RK L    AP
Sbjct:   50 PCARTFKRMRPFSTTSSQSSGGKETSPPAVPETPLYSSHIPTSGFQKLYIAGFSAATAFRDPERGDMVAALGETTGTRALQRLRRAMSADPVGRELLAAKPDIKEDSTRPDRLRRLPEGTFGREYARFLDHHGYSPDERAAVRFVDDAELAFVMQRYRQVHDFWHVLCGLPPTVLGELALKWFEMVQTRLPIAAFSGVVGPLSLSAQE---RKLLKEQYIPWAVRAAVKAR-PLMCVWYERSFEEPLELMRKRLQIVTAP 305          
BLAST of mRNA_F-serratus_M_contig1013.224.1 vs. uniprot
Match: A0A6T5QVX1_HETAK (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6T5QVX1_HETAK)

HSP 1 Score: 257 bits (656), Expect = 2.380e-81
Identity = 130/226 (57.52%), Postives = 158/226 (69.91%), Query Frame = 1
Query:  319 LYGGHQPISPWQRVAIAGWSAVSALRDPGRGDMVAALGEVTGKLALERLYRIMLADPEGAEIVGSKPVINEGTVDLSALAALPEGTFGKSYSNFMEGNKFSPDSRSPVKFVDDDDLAYVMRRYREVHDFWHVLSGLPPTVEGELALKWFELVQTGLPMCALGAVFGPLALPQREPPPREVLARTYVPWALRAGRSTRKPLMCVWYERRWEEPLEQVRKDLGFKVAP 996
            LY  HQP S +Q+  +A +SA+ AL DP R DMVA L E TG++AL  L  +M ADP G +I+  KP+++E TV+L  L +LP GTFG +Y  FM+GN FSP+ R+PV+FVDD +LAYV+ RYR+VHD WH L GLPPTV GELALKW EL+QTGLP+ AL A  GPLAL    P  R +L R Y+PWALRA  + R PLMCV YE  W EPL  VR  LG   AP
Sbjct:   32 LYPTHQPTSTFQKGFLAVYSALVALNDPERADMVAVLSETTGEIALRNLRDVMKADPVGQQILLEKPILDETTVNLENLGSLPRGTFGHAYYTFMDGNGFSPEGRAPVRFVDDAELAYVLLRYRQVHDLWHALFGLPPTVGGELALKWLELLQTGLPVAALSAAAGPLAL---APADRALLRRVYLPWALRAHGALRAPLMCVRYEALWGEPLAAVRARLGVLPAP 254          
BLAST of mRNA_F-serratus_M_contig1013.224.1 vs. uniprot
Match: K3XAS5_GLOUD (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XAS5_GLOUD)

HSP 1 Score: 247 bits (630), Expect = 3.450e-77
Identity = 126/245 (51.43%), Postives = 170/245 (69.39%), Query Frame = 1
Query:  265 AATAGADY-TVSGSPEKRILYGGHQPISPWQRVAIAGWSAVSALRDPGRGDMVAALGEVTGKLALERLYRIMLADPEGAEIVGSKPVINEGTVDLSALAALPEGTFGKSYSNFMEGNKFSPDSRSPVKFVDDDDLAYVMRRYREVHDFWHVLSGLPPTVEGELALKWFELVQTGLPMCALGAVFGPLALPQREPPPREVLARTYVPWALRAGRSTRKPLMCVWYERRWEEPLEQVRKDLGFKVAP 996
            AATA +   + +G P+KR+LY  H P SP Q+V ++ +SA+S   DP RGDM+A LGEVTG+ AL +++  M +DP G  I+  +P I    +D++ L ALP+ TFG +YS FM+ + F  D R+ VK+VDD++LAYVM+R+RE+HDFWHVL GLPPTV GE+ALK+ EL+QT LP+CAL    GPL L   E   R VL R Y+PWA RAGR+    L+ V YE  +E PLE++R+ L  +VAP
Sbjct:   34 AATASSPLGSAAGEPQKRVLYDTHMPTSPVQKVFLSVFSALSVFTDPERGDMLALLGEVTGRDALRQVHAKMCSDPVGVRILTERPSIRSDQIDMTYLRALPKHTFGYAYSQFMDSHGFEADGRAYVKYVDDEELAYVMKRHRELHDFWHVLFGLPPTVFGEIALKYVELLQTKLPVCALSGFVGPLRLTSEE---RRVLVRDYIPWANRAGRNAHF-LLSVMYEEEFETPLEELRQRLRIEVAP 274          
BLAST of mRNA_F-serratus_M_contig1013.224.1 vs. uniprot
Match: A0A151MFC8_ALLMI (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=4 Tax=Crocodylia TaxID=1294634 RepID=A0A151MFC8_ALLMI)

HSP 1 Score: 240 bits (613), Expect = 3.610e-75
Identity = 117/226 (51.77%), Postives = 158/226 (69.91%), Query Frame = 1
Query:  319 LYGGHQPISPWQRVAIAGWSAVSALRDPGRGDMVAALGEVTGKLALERLYRIMLADPEGAEIVGSKPVINEGTVDLSALAALPEGTFGKSYSNFMEGNKFSPDSRSPVKFVDDDDLAYVMRRYREVHDFWHVLSGLPPTVEGELALKWFELVQTGLPMCALGAVFGPLALPQREPPPREVLARTYVPWALRAGRSTRKPLMCVWYERRWEEPLEQVRKDLGFKVAP 996
            LY GH P SP Q+V +A  SA++ALRDP R DMVA LGE TG LAL+RL   M  D EG +I+  +P I   T+D++ L  LP+GTFG+ Y  F+E N+ SPD+R P KFVDD++LAYV++RYREVHD  H L G+P  + GE+ +KWFE VQTGLPMCALGAVFGP+ L  R+    +VL    +PWA+++G      ++ ++YERRWE+ +E +R+++G    P
Sbjct:    9 LYPGHVPTSPLQKVLLAAGSALAALRDPYRHDMVAVLGETTGSLALQRLRDKMRHDAEGYQILRERPRIRLSTLDVAGLRGLPDGTFGREYMRFLEDNRVSPDTRMPAKFVDDEELAYVIQRYREVHDLMHTLLGMPTNMLGEVVVKWFEAVQTGLPMCALGAVFGPIRLKARK---LQVLTTELIPWAVQSGLRA-NCILNIYYERRWEQTVESLREEIGILPPP 230          
BLAST of mRNA_F-serratus_M_contig1013.224.1 vs. uniprot
Match: A0A197JDW1_9FUNG (Ubiquinone biosynthesis protein COQ4, mitochondrial n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197JDW1_9FUNG)

HSP 1 Score: 240 bits (612), Expect = 1.340e-74
Identity = 124/227 (54.63%), Postives = 154/227 (67.84%), Query Frame = 1
Query:  319 LYGGHQPISPWQRVAIAGWSAVSALRDPGRGDMVAALGEVTGKLALERLYRIMLADPEGAEIVGSKPVINEGTVDLSALAALPEGTFGKSYSNFMEGNKFSPDSRSPVKFVDDDDLAYVMRRYREVHDFWHVLSGLPPTVEGELALKWFELVQTGLPMCALGAVFGPLALPQREPPPREVLARTYVPWALRAGRSTRKPLMCVWYERRWEEPLEQVRKDLGFKVAPQ 999
            LY GH PISP QR  +A  SA +AL +P RGDMVAALGE T  + L R+   ML DPEG  I+  +PVI   T+ L  L  LP+GTFG+ Y  F++  + SPD+R PV FVD ++LAYVM+RYRE HDF+H L+GLP TV+GE+ALKWFE+ QTGLPM  L + FGPL L   E   RE L   YVPWAL  G ST K LM V +E   E+P+E V+++LG +  PQ
Sbjct:   51 LYDGHIPISPLQRTILAVGSAFTALANPLRGDMVAALGETTSGIFLNRIRDQMLQDPEGRRILRERPVITSETMQLDTLRQLPDGTFGREYVRFLDDQQVSPDTREPVHFVDSEELAYVMQRYRETHDFYHTLTGLPVTVDGEIALKWFEMAQTGLPMTMLSSFFGPLRLSSEE---RERLFNVYVPWALENG-STSKLLMNVRWEEWMEKPVEDVQRELGVRPCPQ 273          
BLAST of mRNA_F-serratus_M_contig1013.224.1 vs. uniprot
Match: UPI0020261F22 (ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=1 Tax=Sphaerodactylus townsendi TaxID=933632 RepID=UPI0020261F22)

HSP 1 Score: 237 bits (605), Expect = 1.780e-73
Identity = 123/257 (47.86%), Postives = 161/257 (62.65%), Query Frame = 1
Query:  226 SCTFVTRSSERVTAATAGADYTVSGSPEKRILYGGHQPISPWQRVAIAGWSAVSALRDPGRGDMVAALGEVTGKLALERLYRIMLADPEGAEIVGSKPVINEGTVDLSALAALPEGTFGKSYSNFMEGNKFSPDSRSPVKFVDDDDLAYVMRRYREVHDFWHVLSGLPPTVEGELALKWFELVQTGLPMCALGAVFGPLALPQREPPPREVLARTYVPWALRAGRSTRKPLMCVWYERRWEEPLEQVRKDLGFKVAP 996
            SC    R  +R     A A  T  G      LY GH P SP Q+  +   SA  AL DP R DMVA LGE TG LAL++L   M  DPEG +I+  +P I   T+D++ L ALPEGTFG+ Y  F++ N+ SPD+R P KFVDD++LAYV++RYREVHD  H L G+P  + GE+A+KWFE VQTGLPMC LGA+FGP  L  R+     VL    +PWA+R+G S    ++  +YE+RWE+ +E +R ++G    P
Sbjct:   23 SCWVAGRRCQRCHTGQASATETPVGEEASYPLYPGHIPTSPLQKALLTVGSAFMALYDPYRHDMVAVLGETTGSLALQKLRERMRNDPEGHQILQERPRIRLSTLDITGLRALPEGTFGREYVRFLDDNRVSPDTRMPTKFVDDEELAYVVQRYREVHDLMHTLLGMPTNMLGEVAVKWFEAVQTGLPMCILGAMFGPARLNTRK---LYVLTTDLIPWAVRSG-SNASCILNFYYEKRWEQTVESLRNEIGILPPP 275          
BLAST of mRNA_F-serratus_M_contig1013.224.1 vs. uniprot
Match: D0NLX9_PHYIT (Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0NLX9_PHYIT)

HSP 1 Score: 236 bits (601), Expect = 2.930e-73
Identity = 117/235 (49.79%), Postives = 159/235 (67.66%), Query Frame = 1
Query:  292 VSGSPEKRILYGGHQPISPWQRVAIAGWSAVSALRDPGRGDMVAALGEVTGKLALERLYRIMLADPEGAEIVGSKPVINEGTVDLSALAALPEGTFGKSYSNFMEGNKFSPDSRSPVKFVDDDDLAYVMRRYREVHDFWHVLSGLPPTVEGELALKWFELVQTGLPMCALGAVFGPLALPQREPPPREVLARTYVPWALRAGRSTRKPLMCVWYERRWEEPLEQVRKDLGFKVAP 996
            V+G P++RI Y  H P SP Q++ ++  SA++   +P RGDM+AALGEVTG+ AL R++  M ADP GA I+  KPVI    +D+  L ALPE +FG+ Y+ FM+ + F  D RSPV+FVDD +LAYVM+R+RE+HDFWH L  +PPT  GE+ALK+ E+  + LP+ AL A  GPL L   E   R +L + YVPWA RA R+    L CV YE  +E P+E++R+ L  +VAP
Sbjct:    4 VAGLPQRRIQYDSHMPTSPLQKLVLSVTSALTVFANPERGDMLAALGEVTGRDALRRIHARMCADPVGARILAEKPVIRNDKIDMDYLRALPEDSFGRRYATFMDSHGFDADGRSPVRFVDDPELAYVMQRHRELHDFWHTLFDVPPTELGEIALKYVEMAHSKLPVSALSAFVGPLRLSSEE---RCLLVKVYVPWANRASRNAHS-LHCVMYEEEFETPIEKLRQRLNVEVAP 234          
BLAST of mRNA_F-serratus_M_contig1013.224.1 vs. uniprot
Match: A0A7K5FGZ4_PROAR (COQ4 protein (Fragment) n=1 Tax=Probosciger aterrimus TaxID=141839 RepID=A0A7K5FGZ4_PROAR)

HSP 1 Score: 235 bits (600), Expect = 3.760e-73
Identity = 118/226 (52.21%), Postives = 153/226 (67.70%), Query Frame = 1
Query:  319 LYGGHQPISPWQRVAIAGWSAVSALRDPGRGDMVAALGEVTGKLALERLYRIMLADPEGAEIVGSKPVINEGTVDLSALAALPEGTFGKSYSNFMEGNKFSPDSRSPVKFVDDDDLAYVMRRYREVHDFWHVLSGLPPTVEGELALKWFELVQTGLPMCALGAVFGPLALPQREPPPREVLARTYVPWALRAGRSTRKPLMCVWYERRWEEPLEQVRKDLGFKVAP 996
            LY GH P SP Q+  +AG SAV AL DP R DMVA LGE TG LAL  L   M   PEG  I+  +P I   T+D+S L  LP+G+ G+ Y  F+E NK SPD+R P KFVDD++LAYV++RYREVHD  H L G+P  + GE+ +KWFE +QTGLPMC LGA FGP+ L  R+    +VLA   VPWA+R+GR+     + V+YE+RWE+P+E +R+++G    P
Sbjct:   27 LYPGHIPTSPLQKALLAGGSAVMALYDPYRHDMVAVLGETTGCLALPNLRDKMKHHPEGYRILRERPRIRLSTLDMSRLQGLPDGSLGREYVRFLEDNKVSPDTRMPPKFVDDEELAYVIQRYREVHDVMHTLLGMPTNMLGEVVVKWFEAIQTGLPMCVLGAAFGPIRLSARK---LQVLATELVPWAIRSGRNA-SCFLNVYYEQRWEQPVESLREEIGIFPPP 248          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1013.224.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FK62_ECTSI8.680e-12659.88Ubiquinone biosynthesis protein COQ4 homolog, mito... [more]
A0A835Z0M6_9STRA4.630e-8955.92Ubiquinone biosynthesis protein COQ4 homolog, mito... [more]
W7U2W9_9STRA1.320e-8353.08Ubiquinone biosynthesis protein COQ4 homolog, mito... [more]
A0A6T5QVX1_HETAK2.380e-8157.52Ubiquinone biosynthesis protein COQ4 homolog, mito... [more]
K3XAS5_GLOUD3.450e-7751.43Ubiquinone biosynthesis protein COQ4 homolog, mito... [more]
A0A151MFC8_ALLMI3.610e-7551.77Ubiquinone biosynthesis protein COQ4 homolog, mito... [more]
A0A197JDW1_9FUNG1.340e-7454.63Ubiquinone biosynthesis protein COQ4, mitochondria... [more]
UPI0020261F221.780e-7347.86ubiquinone biosynthesis protein COQ4 homolog, mito... [more]
D0NLX9_PHYIT2.930e-7349.79Ubiquinone biosynthesis protein COQ4 homolog, mito... [more]
A0A7K5FGZ4_PROAR3.760e-7352.21COQ4 protein (Fragment) n=1 Tax=Probosciger aterri... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1013contigF-serratus_M_contig1013:250390..253394 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score376.7
Seed ortholog evalue1.1e-101
Seed eggNOG ortholog2880.D7FK62
Preferred nameCOQ4
KEGG koko:K18586
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0006732,GO:0006733,GO:0006743,GO:0006744,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009987,GO:0016020,GO:0019866,GO:0019898,GO:0031090,GO:0031312,GO:0031314,GO:0031966,GO:0031967,GO:0031975,GO:0032991,GO:0042180,GO:0042181,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0051186,GO:0051188,GO:0071704,GO:1901576,GO:1901661,GO:1901663
EggNOG free text desc.ubiquinone biosynthetic process
EggNOG OGsCOG5031@1,KOG3244@2759
Ec32 ortholog descriptionUbiquinone biosynthesis protein Coq4
Ec32 orthologEc-04_005680.1
COG Functional cat.H
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000
Exons6
Model size1005
Cds size1005
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1013.224.1prot_F-serratus_M_contig1013.224.1Fucus serratus malepolypeptideF-serratus_M_contig1013 250390..253394 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928813.1359649-CDS-F-serratus_M_contig1013:250389..2505461622928813.1359649-CDS-F-serratus_M_contig1013:250389..250546Fucus serratus maleCDSF-serratus_M_contig1013 250390..250546 -
1690962583.632623-CDS-F-serratus_M_contig1013:250389..2505461690962583.632623-CDS-F-serratus_M_contig1013:250389..250546Fucus serratus maleCDSF-serratus_M_contig1013 250390..250546 -
1622928813.152978-CDS-F-serratus_M_contig1013:250591..2507561622928813.152978-CDS-F-serratus_M_contig1013:250591..250756Fucus serratus maleCDSF-serratus_M_contig1013 250592..250756 -
1690962583.6519096-CDS-F-serratus_M_contig1013:250591..2507561690962583.6519096-CDS-F-serratus_M_contig1013:250591..250756Fucus serratus maleCDSF-serratus_M_contig1013 250592..250756 -
1622928813.1737757-CDS-F-serratus_M_contig1013:251111..2512361622928813.1737757-CDS-F-serratus_M_contig1013:251111..251236Fucus serratus maleCDSF-serratus_M_contig1013 251112..251236 -
1690962583.659604-CDS-F-serratus_M_contig1013:251111..2512361690962583.659604-CDS-F-serratus_M_contig1013:251111..251236Fucus serratus maleCDSF-serratus_M_contig1013 251112..251236 -
1622928813.1965365-CDS-F-serratus_M_contig1013:251724..2518121622928813.1965365-CDS-F-serratus_M_contig1013:251724..251812Fucus serratus maleCDSF-serratus_M_contig1013 251725..251812 -
1690962583.6764576-CDS-F-serratus_M_contig1013:251724..2518121690962583.6764576-CDS-F-serratus_M_contig1013:251724..251812Fucus serratus maleCDSF-serratus_M_contig1013 251725..251812 -
1622928813.214653-CDS-F-serratus_M_contig1013:252487..2528661622928813.214653-CDS-F-serratus_M_contig1013:252487..252866Fucus serratus maleCDSF-serratus_M_contig1013 252488..252866 -
1690962583.6856618-CDS-F-serratus_M_contig1013:252487..2528661690962583.6856618-CDS-F-serratus_M_contig1013:252487..252866Fucus serratus maleCDSF-serratus_M_contig1013 252488..252866 -
1622928813.242786-CDS-F-serratus_M_contig1013:253303..2533941622928813.242786-CDS-F-serratus_M_contig1013:253303..253394Fucus serratus maleCDSF-serratus_M_contig1013 253304..253394 -
1690962583.6961598-CDS-F-serratus_M_contig1013:253303..2533941690962583.6961598-CDS-F-serratus_M_contig1013:253303..253394Fucus serratus maleCDSF-serratus_M_contig1013 253304..253394 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1013.224.1

>prot_F-serratus_M_contig1013.224.1 ID=prot_F-serratus_M_contig1013.224.1|Name=mRNA_F-serratus_M_contig1013.224.1|organism=Fucus serratus male|type=polypeptide|length=335bp
WDQRQKRRSALALSGNQLYHPSFEMNLGMRGPLSVRSQLLHLASLSGRAT
ATVRTSLRSRLKSPAVSCPLQSPPCSCTFVTRSSERVTAATAGADYTVSG
SPEKRILYGGHQPISPWQRVAIAGWSAVSALRDPGRGDMVAALGEVTGKL
ALERLYRIMLADPEGAEIVGSKPVINEGTVDLSALAALPEGTFGKSYSNF
MEGNKFSPDSRSPVKFVDDDDLAYVMRRYREVHDFWHVLSGLPPTVEGEL
ALKWFELVQTGLPMCALGAVFGPLALPQREPPPREVLARTYVPWALRAGR
STRKPLMCVWYERRWEEPLEQVRKDLGFKVAPQR*
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mRNA from alignment at F-serratus_M_contig1013:250390..253394-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1013.224.1 ID=mRNA_F-serratus_M_contig1013.224.1|Name=mRNA_F-serratus_M_contig1013.224.1|organism=Fucus serratus male|type=mRNA|length=3005bp|location=Sequence derived from alignment at F-serratus_M_contig1013:250390..253394- (Fucus serratus male)
TGGGACCAGAGGCAAAAACGCAGGTCAGCATTAGCTCTGTCTGGAAATCA GCTTTATCATCCTTCCTTCGAGATGAACTTGGGTATGAGAGGTATGTAAT ATAAGAAAAACAGCGATGGTGACGGGTTACCAGCGATAAAGCGCCACCGT TCGTTTCTGAACTTAATGATGTGATACAGAGCAGTTGTTCGAATACAGTA AATACGATTATTATTGGTCTAATACTACTCTTTGATCCTGAGTTTTAACC CGTAGTTCTTGACGAAGGCTGTACTTGTAGTCGTGAGACCGTTCTTACTT CCTACCCCTCCCAAAGCTTCCACGATTTTGATCTCGCTCTTCATTATAAG CACAATGGTTCTTCGTGCCTGTGCACAGCTTACAGTGAATGACCACATTT TAGTAGGTTACTCTTTGGCAAAACCTCCTCCCGGCAGTATATAGAGCAAT TCATTCAGTGACGGTACGCTGTGATCTCTCTCGAGGGAACCTGTTACCTA TTCTCGTCGAATCCCTGCCCATCAACAGGTCCTCTCTCCGTAAGGTCTCA GCTTCTTCACCTAGCCTCACTAAGTGGGCGCGCTACTGCTACAGTGAGAA CCTCGCTGCGATCGAGGCTCAAATCCCCAGCAGTTTCGTGCCCCCTTCAA TCACCTCCCTGTAGTTGTACCTTCGTCACGAGGAGCAGCGAACGCGTCAC TGCAGCCACGGCTGGCGCCGACTACACTGTATCGGGTTCGCCTGAGAAGA GGATTCTCTACGGGGGTCACCAGCCGATATCGCCCTGGCAGCGAGTAGCC ATCGCTGGTTGGTCGGCCGTGTCGGCGTTGAGAGATCCCGGGCGAGGGGA TATGGTGGCGGCTTTGGGAGAGGTGACTGGAAAGTTAGCGCTCGAGAGGC TGTACAGGTACATACACAAAAATATGAGATGACTTCAACCAGGAAATAAT CGCGTATGATCATCAATTCTCGATGGAGGAGGTGCTCGATCGTTGTGGCG CGTGATAGGTTTAGCCGTAGCACGCACGTTTTGGGGAAAGCGGCAGGGGA AACTTCAGAATAGAAAGGTTTATTTTCCTCCATGTCATTCATGCAGTTGT TGGAGTTGTCGTCTATTTGCCAGCAGATTGTCCGGGTTCAGGTTAACCAG AGGTGTTCCTCGACACTACAGACTGTGTCGAAGCGCTTTGACTATTATAT TAGCTCCATTATATTACTATTCTTGCAAAGCTCGCACCTCTCGGGAGAAC CGAGTGCTCGATTTTTTCAGACTCTTCCCGAGCCGATGAACCCGCGTTAG TTCGTACAGCAACCGCGTTACGCGCTTGATACTACGGCGCGAACCATTAC AGAGTAAAGCGCTCCCGAATTATTCCGTTTGATATTTTCGTCTCAGATTC AGGGTTTCTCGTCTCCAAACTACAGATTGTTGTACTACTGAGCTAACGGG TTGAGCAGTCCTCTTTGCCGAAACCTCAATCTGGCCCTGCGACCTCGAGA GGCGTAGACCCACAACAGTATCGAACACTCAAAACGTAACAAGTTAACTT CATGCATACTTTGACTCCGAAACGCCTCGCAGGATAATGCTGGCAGATCC GGAAGGCGCAGAAATTGTTGGATCGAAACCGGTCATTAACGAGGGTACCG TTGATCTTTCCGCGCTAGCGGTGAGTGTAGAGCTACGTGCGTCTCGCACT GTTCACGAACATGTGCAAGATATTTGCATGATTCGCCCGTGGGGTAAATA AACTACGGATTCATGTTCCGCTCGTGCGTGGGGTAACTATTTTGAAGAAA ATACAGAACGCACCTAGACCTTCTGAGCAGGGGTAACTATTTTTGTTGTT GTTGGTTCGTCTTCGTTTCAGCCCGCGATCCGTGCGGGAACGGCAGGGTA AAAACGTTACCCTGCTCAATGTTCTGGCACGCTAGTCGGCGTTTTTGGCG CAGATTTTCGGCAATAGATGACCGCCTGTCTATGGCTTCGCGAGAGTCAC CTGAAGCCTGTTTGTACAACAACTAAATTTACAGCAAGGGTTTCCAAAGA GAGACAGGCATTCCTGCCGGGCTGCTTCCTTTTCGGGCGCGACGACCTCT TTTGTAGTTTCCTTCCCGAGTTGTTTACACACCACAACGAAACCGTCATT GTCACCAGGCGCTCCCGGAAGGGACTTTCGGGAAGAGCTACTCGAATTTT ATGGAGGGGAACAAATTCTCTCCAGACAGTCGCAGCCCCGTAAAATTCGT GGACGACGACGACCTTGCGTACGTGATGCGAAGGTGAGCGGCAGGAGTTG GAGAGCGGATTGACATCGAAACAGGGTCAACCCTCTCGAAGAAACATTGG CTGATTCGTAAAATATGCGACCGGGTGATATTGTCATGCTCACGAGCCCT CATTAACTGCTCGGGGCGCCCCTCTTGCCACGGTCCCCGTCCCCCCCCTG CCCCAACCTGGTGGTAATCCTGATCAACAAAAGATGCGGGAGGGAGGGGG GGGGGGGGGGGATTCTTTGATAACAGGTATTATATTTATAGAGCCTAGTG CAATAGCAGTATTTTCTAATACTACAAAATTACTCCGCGACGTTGTTGCT GGCACCATGTGCCCAACCGATGCAATGCCCCAAAACAGGTATCGCGAGGT CCACGATTTCTGGCACGTGCTGAGTGGCCTGCCCCCGACCGTTGAGGGAG AGCTGGCCCTCAAGTGGTTCGAGCTCGTGCAGACCGGACTGCCCATGTGC GCCCTTGGGGCCGTATTCGGGCCTTTGGCTCTGCCGCAGCGCGAGCCCCC CCCGTCAGACGGCAAGGATCCCGCGAAAAAGTCTACGAGGACAGGGAGCC GGGAGGTTCTGGCGCGAACGTACGTGCCATGGGCTCTCAGGGCGGGGAGA AGTACCCGTAAGCCCCTCATGTGTGTGTGGTACGAACGGAGATGGGAGGA GCCCCTCGAGCAGGTCAGAAAAGATCTAGGCTTCAAGGTGGCGCCGCAGC GGTAG
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Coding sequence (CDS) from alignment at F-serratus_M_contig1013:250390..253394-

>mRNA_F-serratus_M_contig1013.224.1 ID=mRNA_F-serratus_M_contig1013.224.1|Name=mRNA_F-serratus_M_contig1013.224.1|organism=Fucus serratus male|type=CDS|length=2010bp|location=Sequence derived from alignment at F-serratus_M_contig1013:250390..253394- (Fucus serratus male)
TGGGACCAGAGGCAAAAACGCAGGTCAGCATTAGCTCTGTCTGGAAATCA
GCTTTATCATCCTTCCTTCGAGATGAACTTGGGTATGAGAGTGGGACCAG
AGGCAAAAACGCAGGTCAGCATTAGCTCTGTCTGGAAATCAGCTTTATCA
TCCTTCCTTCGAGATGAACTTGGGTATGAGAGGTCCTCTCTCCGTAAGGT
CTCAGCTTCTTCACCTAGCCTCACTAAGTGGGCGCGCTACTGCTACAGTG
AGAACCTCGCTGCGATCGAGGCTCAAATCCCCAGCAGTTTCGTGCCCCCT
TCAATCACCTCCCTGTAGTTGTACCTTCGTCACGAGGAGCAGCGAACGCG
TCACTGCAGCCACGGCTGGCGCCGACTACACTGTATCGGGTTCGCCTGAG
AAGAGGATTCTCTACGGGGGTCACCAGCCGATATCGCCCTGGCAGCGAGT
AGCCATCGCTGGTTGGTCGGCCGTGTCGGCGTTGAGAGATCCCGGGCGAG
GGGATATGGTGGCGGCTTTGGGAGAGGTGACTGGAAAGTTAGCGCTCGAG
AGGCTGTACAGGTCCTCTCTCCGTAAGGTCTCAGCTTCTTCACCTAGCCT
CACTAAGTGGGCGCGCTACTGCTACAGTGAGAACCTCGCTGCGATCGAGG
CTCAAATCCCCAGCAGTTTCGTGCCCCCTTCAATCACCTCCCTGTAGTTG
TACCTTCGTCACGAGGAGCAGCGAACGCGTCACTGCAGCCACGGCTGGCG
CCGACTACACTGTATCGGGTTCGCCTGAGAAGAGGATTCTCTACGGGGGT
CACCAGCCGATATCGCCCTGGCAGCGAGTAGCCATCGCTGGTTGGTCGGC
CGTGTCGGCGTTGAGAGATCCCGGGCGAGGGGATATGGTGGCGGCTTTGG
GAGAGGTGACTGGAAAGTTAGCGCTCGAGAGGCTGTACAGGATAATGCTG
GCAGATCCGGAAGGCGCAGAAATTGTTGGATCGAAACCGGTCATTAACGA
GGGTACCGTTGATCTTTCCGCGCTAGCGGATAATGCTGGCAGATCCGGAA
GGCGCAGAAATTGTTGGATCGAAACCGGTCATTAACGAGGGTACCGTTGA
TCTTTCCGCGCTAGCGGCGCTCCCGGAAGGGACTTTCGGGAAGAGCTACT
CGAATTTTATGGAGGGGAACAAATTCTCTCCAGACAGTCGCAGCCCCGTA
AAATTCGTGGACGACGACGACCTTGCGTACGTGATGCGAAGGCGCTCCCG
GAAGGGACTTTCGGGAAGAGCTACTCGAATTTTATGGAGGGGAACAAATT
CTCTCCAGACAGTCGCAGCCCCGTAAAATTCGTGGACGACGACGACCTTG
CGTACGTGATGCGAAGGTATCGCGAGGTCCACGATTTCTGGCACGTGCTG
AGTGGCCTGCCCCCGACCGTTGAGGGAGAGCTGGCCCTCAAGTGGTTCGA
GCTCGTGCAGACCGGACTGCCCATGTGCGCCCTTGGGGCCGTATTCGGGC
CTTTGGCTCTGCCGCAGCGCGAGCCCCCCCCGTATCGCGAGGTCCACGAT
TTCTGGCACGTGCTGAGTGGCCTGCCCCCGACCGTTGAGGGAGAGCTGGC
CCTCAAGTGGTTCGAGCTCGTGCAGACCGGACTGCCCATGTGCGCCCTTG
GGGCCGTATTCGGGCCTTTGGCTCTGCCGCAGCGCGAGCCCCCCCCCCGG
GAGGTTCTGGCGCGAACGTACGTGCCATGGGCTCTCAGGGCGGGGAGAAG
TACCCGTAAGCCCCTCATGTGTGTGTGGTACGAACGGAGATGGGAGGAGC
CCCTCGAGCAGGTCAGAAAAGATCTAGGCTTCAAGGTGGCGCCGCAGCGG
TAGCCGGGAGGTTCTGGCGCGAACGTACGTGCCATGGGCTCTCAGGGCGG
GGAGAAGTACCCGTAAGCCCCTCATGTGTGTGTGGTACGAACGGAGATGG
GAGGAGCCCCTCGAGCAGGTCAGAAAAGATCTAGGCTTCAAGGTGGCGCC
GCAGCGGTAG
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