mRNA_F-serratus_M_contig1013.220.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1013.220.1 vs. uniprot
Match: D8LLK7_ECTSI (COG0557: Exoribonuclease R n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLK7_ECTSI) HSP 1 Score: 553 bits (1425), Expect = 1.020e-189 Identity = 269/350 (76.86%), Postives = 303/350 (86.57%), Query Frame = 3 Query: 6 FSDEAMEQVRAMVDTPPPDPEAETRRDLTHLKVYAVDSEDTLEVDDGLSVETLPNGGGEVIWVHIADVSRWVPEGSPLYRESRSRRTTSYLPEGSLPMFPAEVAHGVLSLGAGKECYALSMGITLGEDGEIADVTVTPSLVKVTYRLTYEDVEDMLANGIARTSEEWQLGRLDELAQLRYRYRCGRGSVDRFQKSLDNIIKATEDPSSNGGYDVKITPEDPSSRSIRLVTEMMVLVGEGMGMVGARAGIALPYRNQKAPDVFPEEELNSMPVKYCRAQAAYKYMNSAVTATSPQQHWGLGLESYVQWSSPIRRFLDLLAHYQIKRWLSGRETLAGSRIMAEVEAGEGTVQ 1055 FS+EAM Q RAM+ +PPPDPEA RRDLTHLKVYA+DSEDT EVDDGLSVE LP+G GE +WVHIADVSRWVPEGSPLY E+R +RTT YLPEG+ PMFPAEVAHGVLSL +G ECY+LSMGITLGE GEI DV VTP+LVKVTYRLTY+DVEDML NGIA +++EW+LGRLDELAQLRYRYRC +GSVDRFQK LD+ +KA EDPS GGY VK+ PEDPS RSIRLVTEMMVLVGEGMG VG GI LP+R+QKAPD FPE +L +P KYCRAQ AYKYM+SA TAT+PQ HWGLGL+SYVQWSSPIRR+LDLLAHYQ+KRWL G+ TL GS +MA+VEAG+G VQ Sbjct: 295 FSEEAMAQARAMMKSPPPDPEASIRRDLTHLKVYAIDSEDTNEVDDGLSVEALPDGAGERVWVHIADVSRWVPEGSPLYEEARRKRTTIYLPEGAEPMFPAEVAHGVLSLRSGHECYSLSMGITLGESGEITDVIVTPALVKVTYRLTYDDVEDMLVNGIAGSADEWELGRLDELAQLRYRYRCEQGSVDRFQKGLDHNVKAVEDPSVPGGYAVKVIPEDPSCRSIRLVTEMMVLVGEGMGSVGGEEGIPLPFRHQKAPDSFPETDLELLPEKYCRAQGAYKYMSSATTATTPQPHWGLGLDSYVQWSSPIRRYLDLLAHYQVKRWLLGQPTLDGSLVMAQVEAGDGAVQ 644
BLAST of mRNA_F-serratus_M_contig1013.220.1 vs. uniprot
Match: A0A835Z4Y9_9STRA (RNB domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4Y9_9STRA) HSP 1 Score: 272 bits (696), Expect = 5.670e-80 Identity = 155/372 (41.67%), Postives = 212/372 (56.99%), Query Frame = 3 Query: 60 DPEAETRRDLTHLKVYAVDSEDTLEVDD-------------------------GLSVETLPNGGGEVIWVHIADVSRWVPEGSPLYRESRSRRTTSYLPEGSLPMFPAEVAHGVLSLGAGKECYALSMGITLGEDGEIADVTVTPSLVKVTYRLTYEDVEDMLANGIARTSEEWQLGRLDELAQLRYRYR-------CGRGSVDRFQKSLDNIIK-------ATEDPSSNGGYDVKITPEDPSSRSIRLVTEMMVLVGEGMGMVGARAGIALPYRNQKAPDVFPEEE-LNSMPVKYCRAQAAYKYMNSAVTATSPQQHWGLGLESYVQWSSPIRRFLDLLAHYQIKRWLSGRETLAGSRIMAEVEAGEGTVQ 1055 DP+A R DLT LK YA+DS DT +SVE LPNG E +WVHIADVSRWV +GS L +++ R+TT YLPE S+PMFP ++A VLSL AG+ C ALSMG+ L + G I D+TV S + VTYRLTYE V++ML + T E + L + R C FQ + + D ++ G + ++ +DP S++LVTE+M++ GEGM +G GI +P+R Q+AP P+E L P +YCRA A+Y++M+ A+ + P HWGLGL+ YVQWSSPIRRF DL+ H+Q+KRWL G+ L+G+ + V + EGT+Q Sbjct: 385 DPDAAVRVDLTRLKAYAIDSADTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVSVERLPNGR-ERVWVHIADVSRWVQQGSALDQDAARRQTTLYLPEQSVPMFPRDLAENVLSLTAGRPCPALSMGVILNDAGAIEDLTVVASTIVVTYRLTYEHVDEMLYDKYIHTDEAHAVTSLSRHIYTVFHKRPVSEANDCRGDIKPAFQMLTRSTLSKHAHSKHVVPDAAAEDGRGIVVSLDDPDRSSVQLVTELMIMSGEGMARLGREQGIGMPFRCQRAPASPPDEGYLEQFPARYCRAVASYRFMSGAIVSAEPGIHWGLGLDGYVQWSSPIRRFNDLVVHWQVKRWLHGQTPLSGADVAKLVASQEGTLQ 755
BLAST of mRNA_F-serratus_M_contig1013.220.1 vs. uniprot
Match: A0A1Y1IC52_KLENI (3'->5' mt/cp Exoribonuclease II n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IC52_KLENI) HSP 1 Score: 262 bits (669), Expect = 8.790e-76 Identity = 149/331 (45.02%), Postives = 208/331 (62.84%), Query Frame = 3 Query: 3 AFSDEAMEQVRAMVDTPPPDPEAETRRDLTHLKVYAVDSEDTLEVDDGLSVETLPNGGGEVIWVHIADVSRWVPEGSPLYRESRSRRTTSYLPEGSLPMFPAEVAHGVLSLGAGKECYALSMGITLGEDGEIADVTVTPSLVKVTYRLTYEDVEDMLANGIARTSEEWQLGRLDELAQLRYRYRCGRGSVDRFQKSLDNIIKATEDPSSNGGYDVKITPEDPSSRSIRLVTEMMVLVGEGMGMVGARAGIALPYRNQKAPDVFPEEELNSMPVKYCRAQAAYKYMN-SAVTATSPQQHWGLGLESYVQWSSPIRRFLDLLAHYQIKRWLSG 992 AF DE + +TPPPDP ++ R DL HLKVY +DS+DTLEVDDG+SVE LP+G +WVH+AD +RW G L E+R R T++YLP G++PMFP +A G +SL G+EC A+S+G+ L +DG I + T+ S V TYRL+YE+V+++L G+ EE +L L E A R+ YR + +++ K D I+A + + +K+ E SR RLV EMM++ GE + + G G+ALPYR Q+ PD+ + L+ +PV YC++ + M S + P QH LGL +YVQ+SSPIRR+ DLLAHYQIK L G Sbjct: 531 AFPDEVQAEADRRAETPPPDPLSDVRVDLRHLKVYMIDSDDTLEVDDGVSVERLPDGRKR-LWVHVADPTRWTSPGDVLDYEARLRATSAYLPTGAVPMFPMALAGGGMSLLQGQECTAMSVGVVLRDDGSIGETTLVASRVAPTYRLSYEEVDELLNLGL---DEEPELRTLLEEAHRRHEYRYEQHAIE--IKMPDYDIRAFDLDAEPPRVTIKLINERAPSR--RLVEEMMIMAGEAVALWGGEHGVALPYRGQEEPDLPSDHVLDQVPVGYCQSVIIRRCMTRSQINCRGPIQHSSLGLHAYVQFSSPIRRYADLLAHYQIKAVLRG 853
BLAST of mRNA_F-serratus_M_contig1013.220.1 vs. uniprot
Match: A0A6H1TW57_9CYAN (VacB/RNase II family 3'-5' exoribonuclease n=4 Tax=Cyanobacteria TaxID=1117 RepID=A0A6H1TW57_9CYAN) HSP 1 Score: 253 bits (647), Expect = 4.550e-75 Identity = 147/342 (42.98%), Postives = 209/342 (61.11%), Query Frame = 3 Query: 6 FSDEAMEQVRAMVDTPPPDPEAETRRDLTHLKVYAVDSEDTLEVDDGLSVETLPNGGGEVIWVHIADVSRWVPEGSPLYRESRSRRTTSYLPEGSLPMFPAEVAHGVLSLGAGKECYALSMGITLGEDGEIADVTVTPSLVKVTYRLTYEDVEDMLANGIARTSEEWQLGRLDELAQLRYRYRCGRGSVDRFQKSLDNIIKATEDPSSNGGYDVKITPEDPSSRSIRLVTEMMVLVGEGMGMVGARAGIALPYRNQKAPDVFPEEELNSMPVKYCRAQAAYKYMNSAVTATSPQQHWGLGLESYVQWSSPIRRFLDLLAHYQIKRWLSGRETLAGSRIMAEV 1031 FS + +E + +PPPDP+A+ R DLTHLKVY +D E T E+DDGLSVE+L +G +WVHIAD +RW+ G L E+R R TT YLP G +PMFP E+A G +SL G+ C ALS GI L ++G + D T+ PS++K TYRLTY DV++ML GI E ++ ++ E A+ R ++R +G++ ++ IK D V++ + P+ + LV EMM+L GE G G R I LP+R+Q P++ P EEL +P RA A + M + +T P +H L L++Y Q +SPIRR+ DLLAH+QIK +L G E S+ + +V Sbjct: 242 FSTKVLEVAHRCLTSPPPDPDADNRLDLTHLKVYTIDDESTEEIDDGLSVESLEDGRRR-LWVHIADPTRWLTPGDELDLEARRRCTTVYLPTGMVPMFPPELATGPMSLVQGEICPALSFGIVLDDNGAVEDYTIHPSIIKPTYRLTYHDVDEMLQLGI---QAEPEIAQIAESAKKRQQWRDSQGAIA--ISMPESTIKVCGDE-----IFVEVLDDSPARQ---LVAEMMILTGEVAGHFGQRENIPLPFRSQPTPELPPPEELQLLPPGPVRACAIRRCMPRSEMSTKPGRHASLALDNYTQVTSPIRRYSDLLAHFQIKAYLRGDEVPFSSQDLQDV 569
BLAST of mRNA_F-serratus_M_contig1013.220.1 vs. uniprot
Match: UPI0019E0A038 (VacB/RNase II family 3'-5' exoribonuclease n=1 Tax=filamentous cyanobacterium LEGE 07170 TaxID=1828880 RepID=UPI0019E0A038) HSP 1 Score: 251 bits (640), Expect = 4.740e-74 Identity = 150/331 (45.32%), Postives = 205/331 (61.93%), Query Frame = 3 Query: 6 FSDEAMEQVRAMVDTPPPDPEAETRRDLTHLKVYAVDSEDTLEVDDGLSVETLPNGGGEVIWVHIADVSRWVPEGSPLYRESRSRRTTSYLPEGSLPMFPAEVAHGVLSLGAGKECYALSMGITLGEDGEIADVTVTPSLVKVTYRLTYEDVEDMLANGIARTSEEWQLGRLDELAQLRYRYRCGRGSVDRFQKSLDNIIKATEDPSSNGGYDVKITPEDPSSRSIRLVTEMMVLVGEGMGMVGARAGIALPYRNQKAPDVFPEEELNSMPVKYCRAQAAYKYMNSAVTATSPQQHWGLGLESYVQWSSPIRRFLDLLAHYQIKRWLSGRE 998 FS +E V+ PPPD + R DLTHLKVY +D T E+DDGLS+E G + IW+HIAD +RWV G L +E+R R TT YLP G +PMFP E+A G +SL G+ CYALS GI L DG I D + P+L+K TYRLTYEDV++ML G+ T+EE +L L++ AQ R ++R +G++D + ++ IK ED +++ + PS + LV EMM+L GE G G GI LP+R Q P++ PEEEL ++P R A + M + T+ +P +H LGL++Y Q +SPIRR+ DLLAH+Q+K L G E Sbjct: 242 FSRPVLEAVQQYQTMPPPDSSPD-RLDLTHLKVYTIDDASTREIDDGLSLE-FQEDGIQRIWIHIADPTRWVTPGDVLEQEARRRCTTVYLPTGMIPMFPQELATGPMSLIQGRVCYALSFGIILDGDGAICDYEIHPTLIKPTYRLTYEDVDEMLQLGV--TAEE-ELLVLEQWAQRRLQFRRLQGAID--IRMPESSIKVLEDE-----VVIEVLEDAPSRQ---LVAEMMILAGETAGRYGQEQGIPLPFRGQPQPELPPEEELLALPSGPVRYSAIRRCMPRSETSIAPIRHASLGLDTYTQVTSPIRRYADLLAHFQLKAHLRGDE 557
BLAST of mRNA_F-serratus_M_contig1013.220.1 vs. uniprot
Match: K9RQP0_SYNP3 (Exoribonuclease R n=1 Tax=Synechococcus sp. (strain ATCC 27167 / PCC 6312) TaxID=195253 RepID=K9RQP0_SYNP3) HSP 1 Score: 249 bits (637), Expect = 1.250e-73 Identity = 150/331 (45.32%), Postives = 196/331 (59.21%), Query Frame = 3 Query: 3 AFSDEAMEQVRAMVDTPPPDPEAETRRDLTHLKVYAVDSEDTLEVDDGLSVETLPNGGGEVIWVHIADVSRWVPEGSPLYRESRSRRTTSYLPEGSLPMFPAEVAHGVLSLGAGKECYALSMGITLGEDGEIADVTVTPSLVKVTYRLTYEDVEDMLANGIARTSEEWQLGRLDELAQLRYRYRCGRGSVDRFQKSLDNIIKATEDPSSNGGYDVKITP-EDPSSRSIRLVTEMMVLVGEGMGMVGARAGIALPYRNQKAPDVFPEEELNSMPVKYCRAQAAYKYMNSAVTATSPQQHWGLGLESYVQWSSPIRRFLDLLAHYQIKRWLSG 992 AF E ++ R + PPPD +A R+DLTHLKVY +D E T E+DDG+S+ETLPNG E +W+HIAD SRW+ G L +E+R R TT YLP G +PMFP E+A G +SL AGK C ALS GI L DG IAD + PSL+K TYRLTYEDV+ ML + E +G Q R +R +G++ + IK +D +V I P D +R +LV EMM+L GE G I LP+R+Q P++ PEEEL +P R A + M + + +P +H LGL +Y Q +SPIRR+ DL+AH QIK L G Sbjct: 243 AFKPEVVDMARHCISNPPPDLDAPIRQDLTHLKVYTIDDESTQEIDDGISLETLPNGQ-ERLWIHIADPSRWLLLGDGLEQEARRRATTVYLPTGMIPMFPPELATGPMSLVAGKTCCALSFGIILQPDGSIADYQICPSLIKPTYRLTYEDVDMMLELAVQNEPELLGIG---AWMQKRLAWRQQQGAIQINMPEPE--IKVVDD-------EVDIHPLADSVAR--QLVAEMMILTGEVAARFGEAQNIPLPFRSQTQPELPPEEELQQLPPGPVRQCAIRRCMPKSEMSPTPNRHASLGLNAYCQVTSPIRRYSDLIAHMQIKAHLRG 558
BLAST of mRNA_F-serratus_M_contig1013.220.1 vs. uniprot
Match: A0A846DPA7_9CYAN (VacB/RNase II family 3'-5' exoribonuclease n=1 Tax=Moorena sp. SIO2B7 TaxID=2607823 RepID=A0A846DPA7_9CYAN) HSP 1 Score: 247 bits (630), Expect = 2.030e-73 Identity = 151/342 (44.15%), Postives = 202/342 (59.06%), Query Frame = 3 Query: 6 FSDEAMEQVRAMVDTPPPDPEAETRRDLTHLKVYAVDSEDTLEVDDGLSVETLPNGGGEVIWVHIADVSRWVPEGSPLYRESRSRRTTSYLPEGSLPMFPAEVAHGVLSLGAGKECYALSMGITLGEDGEIADVTVTPSLVKVTYRLTYEDVEDMLANGIARTSEEWQLGRLDELAQLRYRYRCGRGSVDRFQKSLDNIIKATEDPSSNGGYDVKITPEDPSSRSIRLVTEMMVLVGEGMGMVGARAGIALPYRNQKAPDVFPEEELNSMPVKYCRAQAAYKYMNSAVTATSPQQHWGLGLESYVQWSSPIRRFLDLLAHYQIKRWLSGRETLAGSRIMAEV 1031 F+ + +E + +D+PP DP+ R DLTHLKVY +D E T E+DDGLSVE L +G +W+HIAD +R V G L E+R R T+ YLP G + MFP E+A G +SL GK C ALS GI LGE+G + D T+ PSL+K TYRLTY+DV++ML GI E +L L A+ R +R +GS+ Q NI +D ++ I D +SRS +LV EMM+L GE G G I LP+R Q P++ PEEEL +P R+ A + M + +P +H GLGL +Y Q +SPIRR+ DLLAH+QIK L G S M ++ Sbjct: 149 FAKKVVEVAQCCLDSPPCDPDV-NRLDLTHLKVYTIDDESTKEIDDGLSVEYLGDGKPPRLWIHIADPTRLVFPGDELDLEARRRSTSLYLPTGMISMFPEELATGPMSLVQGKVCPALSFGIILGEEGTVQDYTIHPSLIKPTYRLTYDDVDEMLQLGI---KAEPELEELATWAKRREEWRRSQGSIS-IQMPESNIKVKQDD-------EIVIELLD-NSRSRQLVAEMMILAGEVAGSYGQENNIPLPFRGQPQPELPPEEELIQLPAGPVRSCALRRCMPRSEMGITPNRHAGLGLNTYTQVTSPIRRYTDLLAHFQIKAHLRGDSLPFSSEEMQDI 477
BLAST of mRNA_F-serratus_M_contig1013.220.1 vs. uniprot
Match: UPI0016864128 (ribonuclease R n=1 Tax=Microcoleus sp. FACHB-1515 TaxID=2692821 RepID=UPI0016864128) HSP 1 Score: 248 bits (634), Expect = 4.520e-73 Identity = 146/331 (44.11%), Postives = 199/331 (60.12%), Query Frame = 3 Query: 6 FSDEAMEQVRAMVDTPPPDPEAETRRDLTHLKVYAVDSEDTLEVDDGLSVETLPNGGGEVIWVHIADVSRWVPEGSPLYRESRSRRTTSYLPEGSLPMFPAEVAHGVLSLGAGKECYALSMGITLGEDGEIADVTVTPSLVKVTYRLTYEDVEDMLANGIARTSEEWQLGRLDELAQLRYRYRCGRGSVDRFQKSLDNIIKATEDPSSNGGYDVKITPEDPSSRSIRLVTEMMVLVGEGMGMVGARAGIALPYRNQKAPDVFPEEELNSMPVKYCRAQAAYKYMNSAVTATSPQQHWGLGLESYVQWSSPIRRFLDLLAHYQIKRWLSGRE 998 F ++ + TPPPDP+ R DLTHLKVY +D E T E+DDGLS+ETLP+G +W+HIAD +R+V G L E+R R TT YLP G +PMFP E+A G +SL G+ C ALS G+ L E G IAD + PSL+K TYRLTYEDV++ML G+ +E L + + A+LR+++R +G++ ++ IK +D ++ I D S RLV EMM+L GE G G + LPYR Q P++ PEEEL +P RA A + M + +P +H LGL++Y Q +SPIRR+ DLL H+QIK L G + Sbjct: 255 FPSRVIDMAHRCLQTPPPDPDT-NRLDLTHLKVYTIDDESTKEIDDGLSLETLPDGIHR-LWIHIADPTRYVLPGDELDLEARRRCTTVYLPTGMIPMFPPELATGPMSLVQGRLCTALSFGVILDESGAIADFEIHPSLIKPTYRLTYEDVDEMLDLGVEAEAE---LETIAQFAKLRHQWRHQQGAISIHMP--ESSIKVQDD-------EITIEVLDDSIAR-RLVAEMMILAGETAGRYGQEHSLPLPYRGQAQPELPPEEELMLLPSGPVRASAIRRCMPRSEMNIAPVRHASLGLDTYTQVTSPIRRYTDLLTHFQIKAHLRGED 570
BLAST of mRNA_F-serratus_M_contig1013.220.1 vs. uniprot
Match: A0A8J7JK67_9CYAN (VacB/RNase II family 3'-5' exoribonuclease n=1 Tax=Nodosilinea sp. LEGE 07088 TaxID=2777968 RepID=A0A8J7JK67_9CYAN) HSP 1 Score: 247 bits (630), Expect = 1.610e-72 Identity = 146/345 (42.32%), Postives = 206/345 (59.71%), Query Frame = 3 Query: 6 FSDEAMEQVRAMVDTPPPDPEAETRRDLTHLKVYAVDSEDTLEVDDGLSVETLPNGGGEVIWVHIADVSRWVPEGSPLYRESRSRRTTSYLPEGSLPMFPAEVAHGVLSLGAGKECYALSMGITLGEDGEIADVTVTPSLVKVTYRLTYEDVEDMLANGIARTSEEWQLGRLDELAQLRYRYRCGRGSVDRFQKSLDNIIKATEDPSSNGGYDVKITPEDPSSRSIRLVTEMMVLVGEGMGMVGARAGIALPYRNQKAPDVFPEEELNSMPVKYCRAQAAYKYMNSAVTATSPQQHWGLGLESYVQWSSPIRRFLDLLAHYQIKRWLSGRETLAGSRIMAEVEAG 1040 FS+E + + +++PPPDP+A+ R DLTHLKVY VD T E+DDGLS+E L GG +WVHIAD +RW+ G L E+R R TT YLP G +PMFP E+A G +SL G+ C ALS GITL +G I D T+ P+L++ TYRLTY+DV++ML GI + E +L L + A+ R ++R +G++ ++ IK +E D I S + ++V EMM+L GE G +A+P+R Q P++ +EEL S+P + R A + M + +P +H LGLESY Q +SPIRR+LDLL H+Q+K L G S + E+ G Sbjct: 243 FSEETLTMAQQRLESPPPDPDAQ-RLDLTHLKVYTVDDVSTQEIDDGLSLEAL-EGGAHRVWVHIADPTRWLMPGDDLDLEARRRCTTVYLPTGMIPMFPVELATGAMSLIQGQICCALSFGITLTPEGNIQDYTIHPTLIRPTYRLTYDDVDEMLELGI---TAEPELHGLAQWAKTRGQWRLTQGAIS--INMPESSIKVSE------AEDDIIIEVLNDSMARQMVAEMMILAGEVAARYGQAHALAIPFRGQPQPELPSDEELISLPTGWVRDSAIRRCMTRSEVGVTPSRHATLGLESYSQVTSPIRRYLDLLVHFQLKAHLRGEPLPFSSTEVTELAIG 574
BLAST of mRNA_F-serratus_M_contig1013.220.1 vs. uniprot
Match: K9SD06_9CYAN (Exoribonuclease II n=1 Tax=Geitlerinema sp. PCC 7407 TaxID=1173025 RepID=K9SD06_9CYAN) HSP 1 Score: 246 bits (629), Expect = 2.050e-72 Identity = 149/348 (42.82%), Postives = 209/348 (60.06%), Query Frame = 3 Query: 6 FSDEAMEQVRAMVDTPPPDPEAETRRDLTHLKVYAVDSEDTLEVDDGLSVETLPNGGGEVIWVHIADVSRWVPEGSPLYRESRSRRTTSYLPEGSLPMFPAEVAHGVLSLGAGKECYALSMGITLGEDGEIADVTVTPSLVKVTYRLTYEDVEDMLANGIARTSEEWQLGRLDELAQLRYRYRCGRGSVDRFQKSLDNIIKATEDPSSNGGYDVKITPEDPSSRSIRLVTEMMVLVGEGMGMVGARAGIALPYRNQKAPDVFPEEELNSMPVKYCRAQAAYKYMNSAVTATSPQQHWGLGLESYVQWSSPIRRFLDLLAHYQIKRWLSGRETLAGSRIMAEVEAGEGT 1049 FS + ++ + +PPPD + R DLTHLKVY +D E T E+DDGLS+E LP+G E +W+HIAD +RWV G L E+R R TT YLP G +PMFP+++A G +SL G+ C ALS G+ L +G + D ++ S +K TYRLTYEDV++ML GI + E +L + E A+ R R+R +G++ + ++ IK +D V ED +R +LV EMM+L GE G G+ +P+RNQ P++ PEEEL +P RA A + M + + +P +H LGL++Y Q +SPIRR+ DLLAH+QIK L G T S +M EV A T Sbjct: 242 FSTKVIDVAHGRLQSPPPDAHPD-RLDLTHLKVYTIDDESTREIDDGLSLEYLPDGR-ERLWIHIADPTRWVEPGDELDLEARRRGTTVYLPTGMIPMFPSDLATGPMSLIQGQICCALSFGVLLTAEGAVEDYSIHVSRIKPTYRLTYEDVDEMLQLGI---TAEPELNGIAEWARRRDRWRHAQGAIS--IRMPESSIKVQDDEV------VVNVLEDSQAR--QLVAEMMILAGEVAAHYGQTHGLYMPFRNQTQPELPPEEELMQLPAGPVRACAIRRCMPRSEMSLTPARHASLGLDTYTQVTSPIRRYTDLLAHFQIKAHLRGEPTPFSSDVMQEVLASVST 574 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1013.220.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1013.220.1 >prot_F-serratus_M_contig1013.220.1 ID=prot_F-serratus_M_contig1013.220.1|Name=mRNA_F-serratus_M_contig1013.220.1|organism=Fucus serratus male|type=polypeptide|length=345bp MEQVRAMVDTPPPDPEAETRRDLTHLKVYAVDSEDTLEVDDGLSVETLPNback to top mRNA from alignment at F-serratus_M_contig1013:191651..202549+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1013.220.1 ID=mRNA_F-serratus_M_contig1013.220.1|Name=mRNA_F-serratus_M_contig1013.220.1|organism=Fucus serratus male|type=mRNA|length=10899bp|location=Sequence derived from alignment at F-serratus_M_contig1013:191651..202549+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1013:191651..202549+ >mRNA_F-serratus_M_contig1013.220.1 ID=mRNA_F-serratus_M_contig1013.220.1|Name=mRNA_F-serratus_M_contig1013.220.1|organism=Fucus serratus male|type=CDS|length=2070bp|location=Sequence derived from alignment at F-serratus_M_contig1013:191651..202549+ (Fucus serratus male)back to top |