|
Homology
BLAST of mRNA_F-serratus_M_contig1008.176.1 vs. uniprot
Match: D7FKE2_ECTSI (V-type proton ATPase subunit F n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FKE2_ECTSI) HSP 1 Score: 219 bits (558), Expect = 7.220e-68 Identity = 109/116 (93.97%), Postives = 112/116 (96.55%), Query Frame = 1
Query: 1 MDESGKLIAIIGDEDTVTGFLLAGVGHRTVNTTNFLVVKNDTTVSQIEDAFNRLTAREDIAIVLINQHVAGEIRHVLSGYSKTIPTVLEIPSKDVPYDPEQDYIMQRINLMLGGGQ 348
MDESGKLIAIIGDEDTVTGFLLAGVGHRTVNTTNFLVVKNDTTVSQIEDAFNRLTAR+DIAIVLINQHVA EIRH+L YSKTIPTVLEIPSKDVPYDPEQDYIMQRIN+MLG GQ
Sbjct: 1 MDESGKLIAIIGDEDTVTGFLLAGVGHRTVNTTNFLVVKNDTTVSQIEDAFNRLTARDDIAIVLINQHVANEIRHLLGSYSKTIPTVLEIPSKDVPYDPEQDYIMQRINMMLGAGQ 116
BLAST of mRNA_F-serratus_M_contig1008.176.1 vs. uniprot
Match: A0A6V1QDC6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1QDC6_HETAK) HSP 1 Score: 186 bits (473), Expect = 4.000e-55 Identity = 90/114 (78.95%), Postives = 100/114 (87.72%), Query Frame = 1
Query: 1 MDESGKLIAIIGDEDTVTGFLLAGVGHRTVNTTNFLVVKNDTTVSQIEDAFNRLTAREDIAIVLINQHVAGEIRHVLSGYSKTIPTVLEIPSKDVPYDPEQDYIMQRINLMLGG 342
M+ESGKLIAIIGDEDTVTGFLLAG GHR + +TNFLVVK DT++ IEDAF R + RED+AI+LINQHVA EIRH+L Y KTIPTVLEIPSKD PYDPEQDYIMQRIN+MLGG
Sbjct: 1 MEESGKLIAIIGDEDTVTGFLLAGAGHRQMGSTNFLVVKPDTSIGIIEDAFRRFSEREDVAIILINQHVANEIRHILKDYEKTIPTVLEIPSKDHPYDPEQDYIMQRINMMLGG 114
BLAST of mRNA_F-serratus_M_contig1008.176.1 vs. uniprot
Match: A0A7S2RXZ3_9STRA (V-type proton ATPase subunit F n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RXZ3_9STRA) HSP 1 Score: 184 bits (468), Expect = 4.540e-54 Identity = 85/115 (73.91%), Postives = 103/115 (89.57%), Query Frame = 1
Query: 1 MDESGKLIAIIGDEDTVTGFLLAGVGHRTVNTTNFLVVKNDTTVSQIEDAFNRLTAREDIAIVLINQHVAGEIRHVLSGYSKTIPTVLEIPSKDVPYDPEQDYIMQRINLMLGGG 345
M+++GKLIA+IGDEDTVTGFLLAG+GHRT ++TNFLVVK DT + +E AFN +T+REDI I+LINQHVA +IRH+L+ Y KTIPTVLEIPSKD PYDPEQDYIMQR+N++LGGG
Sbjct: 22 MEQAGKLIAVIGDEDTVTGFLLAGIGHRTADSTNFLVVKPDTALPVVESAFNDMTSREDIGIILINQHVANDIRHLLNAYDKTIPTVLEIPSKDSPYDPEQDYIMQRVNMILGGG 136
BLAST of mRNA_F-serratus_M_contig1008.176.1 vs. uniprot
Match: A0A7R9WY84_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WY84_9STRA) HSP 1 Score: 177 bits (449), Expect = 1.500e-51 Identity = 83/113 (73.45%), Postives = 96/113 (84.96%), Query Frame = 1
Query: 7 ESGKLIAIIGDEDTVTGFLLAGVGHRTVNTTNFLVVKNDTTVSQIEDAFNRLTAREDIAIVLINQHVAGEIRHVLSGYSKTIPTVLEIPSKDVPYDPEQDYIMQRINLMLGGG 345
E GKL+A+IGDEDTVTGFLLAGVGHRT NFL+VK DT + QIEDAF L+AR+D+ I+LINQHVA +IRHVL Y+ TIPTVLEIPSK+ PYDPEQDYIMQR+N+ LGGG
Sbjct: 2 EVGKLVAVIGDEDTVTGFLLAGVGHRTAEGANFLIVKQDTKLQQIEDAFKTLSARDDVGIILINQHVANDIRHVLKDYNATIPTVLEIPSKEHPYDPEQDYIMQRVNMFLGGG 114
BLAST of mRNA_F-serratus_M_contig1008.176.1 vs. uniprot
Match: A0A7S2UUR5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUR5_9STRA) HSP 1 Score: 176 bits (446), Expect = 4.200e-51 Identity = 84/112 (75.00%), Postives = 95/112 (84.82%), Query Frame = 1
Query: 7 ESGKLIAIIGDEDTVTGFLLAGVGHRTVNTTNFLVVKNDTTVSQIEDAFNRLTAREDIAIVLINQHVAGEIRHVLSGYSKTIPTVLEIPSKDVPYDPEQDYIMQRINLMLGG 342
+ GKLI IGDEDTVTGFLLAGVG R+ ++NFLVVK DT +SQ+EDAF + T R D+AI+LINQH+A EIRHVL Y KTIPTVLEIPSKD PYDPEQDYIMQRIN+MLGG
Sbjct: 2 DDGKLICTIGDEDTVTGFLLAGVGQRSSGSSNFLVVKQDTPISQVEDAFKKFTERPDVAIILINQHIANEIRHVLQDYEKTIPTVLEIPSKDHPYDPEQDYIMQRINVMLGG 113
BLAST of mRNA_F-serratus_M_contig1008.176.1 vs. uniprot
Match: A0A7R9WZ34_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WZ34_9STRA) HSP 1 Score: 177 bits (449), Expect = 8.920e-51 Identity = 83/113 (73.45%), Postives = 96/113 (84.96%), Query Frame = 1
Query: 7 ESGKLIAIIGDEDTVTGFLLAGVGHRTVNTTNFLVVKNDTTVSQIEDAFNRLTAREDIAIVLINQHVAGEIRHVLSGYSKTIPTVLEIPSKDVPYDPEQDYIMQRINLMLGGG 345
E GKL+A+IGDEDTVTGFLLAGVGHRT NFL+VK DT + QIEDAF L+AR+D+ I+LINQHVA +IRHVL Y+ TIPTVLEIPSK+ PYDPEQDYIMQR+N+ LGGG
Sbjct: 58 EVGKLVAVIGDEDTVTGFLLAGVGHRTAEGANFLIVKQDTKLQQIEDAFKTLSARDDVGIILINQHVANDIRHVLKDYNATIPTVLEIPSKEHPYDPEQDYIMQRVNMFLGGG 170
BLAST of mRNA_F-serratus_M_contig1008.176.1 vs. uniprot
Match: W7TU11_9STRA (V-type proton ATPase subunit F n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TU11_9STRA) HSP 1 Score: 175 bits (443), Expect = 1.260e-50 Identity = 82/113 (72.57%), Postives = 96/113 (84.96%), Query Frame = 1
Query: 4 DESGKLIAIIGDEDTVTGFLLAGVGHRTVNTTNFLVVKNDTTVSQIEDAFNRLTAREDIAIVLINQHVAGEIRHVLSGYSKTIPTVLEIPSKDVPYDPEQDYIMQRINLMLGG 342
+E GKL+ +IGDEDTVTGFLLAGVGHRT+ NFLVVKNDT +S +E+ FNRLT R+DI IVLINQH+A +IRHV+ Y++TIPTVLEIPSKD PYDPE D IMQR+NLM GG
Sbjct: 3 EEDGKLVGVIGDEDTVTGFLLAGVGHRTMEGANFLVVKNDTPLSLVEETFNRLTERDDIGIVLINQHIANDIRHVIKNYTQTIPTVLEIPSKDHPYDPEADSIMQRVNLMTGG 115
BLAST of mRNA_F-serratus_M_contig1008.176.1 vs. uniprot
Match: A0A812VHX2_SYMMI (VatF protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812VHX2_SYMMI) HSP 1 Score: 174 bits (442), Expect = 1.710e-50 Identity = 80/114 (70.18%), Postives = 97/114 (85.09%), Query Frame = 1
Query: 1 MDESGKLIAIIGDEDTVTGFLLAGVGHRTVNTTNFLVVKNDTTVSQIEDAFNRLTAREDIAIVLINQHVAGEIRHVLSGYSKTIPTVLEIPSKDVPYDPEQDYIMQRINLMLGG 342
MD+SGKL+A+IGDEDTVTGF+LAGVGHRT+ NFL+VK +T + IEDAF T+R D+ IVLINQH+A +IRH+L Y+KTIPT+LEIPSKD PYDP+QD IMQR+NLMLGG
Sbjct: 1 MDDSGKLVALIGDEDTVTGFVLAGVGHRTIEGQNFLIVKQETEIPTIEDAFRNYTSRNDVGIVLINQHIANDIRHLLRDYNKTIPTILEIPSKDQPYDPDQDSIMQRVNLMLGG 114
BLAST of mRNA_F-serratus_M_contig1008.176.1 vs. uniprot
Match: A0A7S1VV45_9STRA (Hypothetical protein n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1VV45_9STRA) HSP 1 Score: 174 bits (440), Expect = 3.300e-50 Identity = 81/113 (71.68%), Postives = 96/113 (84.96%), Query Frame = 1
Query: 7 ESGKLIAIIGDEDTVTGFLLAGVGHRTVNTTNFLVVKNDTTVSQIEDAFNRLTAREDIAIVLINQHVAGEIRHVLSGYSKTIPTVLEIPSKDVPYDPEQDYIMQRINLMLGGG 345
E GKL+AIIGDEDTVTGFLLAGVGHRT NFLVVK DT + Q+E AF++ + R+D+ I+LINQHVA +IRHVL Y++TIPTVLEIPSK+ PYDPEQDYIMQR+N+ LGGG
Sbjct: 2 EVGKLVAIIGDEDTVTGFLLAGVGHRTAEGANFLVVKQDTGLEQVEQAFSKFSLRDDVGIILINQHVANDIRHVLKDYNQTIPTVLEIPSKEHPYDPEQDYIMQRVNMFLGGG 114
BLAST of mRNA_F-serratus_M_contig1008.176.1 vs. uniprot
Match: B7GDY0_PHATC (Predicted protein n=3 Tax=Bacillariophycidae TaxID=33850 RepID=B7GDY0_PHATC) HSP 1 Score: 173 bits (439), Expect = 4.650e-50 Identity = 79/113 (69.91%), Postives = 96/113 (84.96%), Query Frame = 1
Query: 7 ESGKLIAIIGDEDTVTGFLLAGVGHRTVNTTNFLVVKNDTTVSQIEDAFNRLTAREDIAIVLINQHVAGEIRHVLSGYSKTIPTVLEIPSKDVPYDPEQDYIMQRINLMLGGG 345
E GKLIA+IGDEDTVTGFLLAGVGHRT + +NFL+VK DT + Q+E+AF + R+D+ I+LINQHVA +IRH+L Y +TIPTVLEIPSK+ PYDPEQDYIMQR+N+ LGGG
Sbjct: 2 EVGKLIAVIGDEDTVTGFLLAGVGHRTADGSNFLIVKQDTKLQQVEEAFQNFSVRDDVGIILINQHVANDIRHILKDYHETIPTVLEIPSKEHPYDPEQDYIMQRVNMFLGGG 114
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 219.5 |
Seed ortholog evalue | 8e-55 |
Seed eggNOG ortholog | 2880.D7FKE2 |
Preferred name | ATP6V1F |
KEGG ko | ko:K02151 |
KEGG TC | 3.A.2.2 |
KEGG Pathway | ko00190,ko01100,ko04145,ko04150,ko04721,ko04966,ko05110,ko05120,ko05323,map00190,map01100,map04145,map04150,map04721,map04966,map05110,map05120,map05323 |
KEGG Module | M00160 |
Hectar predicted targeting category | other localisation |
GOs | GO:0000041,GO:0000221,GO:0000322,GO:0000323,GO:0000324,GO:0000329,GO:0000331,GO:0003674,GO:0003824,GO:0005215,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005773,GO:0005774,GO:0005794,GO:0005829,GO:0005886,GO:0006810,GO:0006811,GO:0006812,GO:0006826,GO:0006873,GO:0006885,GO:0007035,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0008104,GO:0008150,GO:0008286,GO:0008324,GO:0009719,GO:0009725,GO:0009987,GO:0010033,GO:0010243,GO:0012505,GO:0015031,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015672,GO:0015682,GO:0015833,GO:0015988,GO:0015991,GO:0016020,GO:0016021,GO:0016462,GO:0016469,GO:0016471,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019725,GO:0019829,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0023052,GO:0030001,GO:0030003,GO:0030004,GO:0030641,GO:0031090,GO:0031164,GO:0031224,GO:0031410,GO:0031982,GO:0032868,GO:0032869,GO:0032870,GO:0032991,GO:0033036,GO:0033176,GO:0033178,GO:0033180,GO:0033181,GO:0033572,GO:0034220,GO:0036442,GO:0042221,GO:0042592,GO:0042623,GO:0042624,GO:0042625,GO:0042626,GO:0042886,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043434,GO:0043492,GO:0044422,GO:0044424,GO:0044425,GO:0044433,GO:0044437,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0044769,GO:0045184,GO:0045851,GO:0046961,GO:0048878,GO:0050789,GO:0050794,GO:0050801,GO:0050896,GO:0051179,GO:0051234,GO:0051452,GO:0051453,GO:0051716,GO:0055067,GO:0055080,GO:0055082,GO:0055085,GO:0065007,GO:0065008,GO:0070887,GO:0071310,GO:0071375,GO:0071417,GO:0071495,GO:0071702,GO:0071705,GO:0071944,GO:0072512,GO:0090662,GO:0097708,GO:0098588,GO:0098655,GO:0098660,GO:0098662,GO:0098771,GO:0098796,GO:0098797,GO:0098805,GO:0098852,GO:0099131,GO:0099132,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902600 |
EggNOG free text desc. | proton-transporting ATPase activity, rotational mechanism |
EggNOG OGs | COG1436@1,KOG3432@2759 |
Ec32 ortholog description | ATPase, V1 complex, subunit F |
Ec32 ortholog | Ec-05_005880.1 |
COG Functional cat. | C |
BiGG Reaction | iMM904.YGR020C,iND750.YGR020C |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
BRITE | ko00000,ko00001,ko00002 |
Exons | 4 |
Model size | 1189 |
Cds size | 351 |
Stop | 1 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622928801.9989698-UTR-F-serratus_M_contig1008:123605..124443 | 1622928801.9989698-UTR-F-serratus_M_contig1008:123605..124443 | Fucus serratus male | UTR | F-serratus_M_contig1008 123606..124443 - |
1690962578.7580252-UTR-F-serratus_M_contig1008:123605..124443 | 1690962578.7580252-UTR-F-serratus_M_contig1008:123605..124443 | Fucus serratus male | UTR | F-serratus_M_contig1008 123606..124443 - |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622928802.0155263-CDS-F-serratus_M_contig1008:124443..124507 | 1622928802.0155263-CDS-F-serratus_M_contig1008:124443..124507 | Fucus serratus male | CDS | F-serratus_M_contig1008 124444..124507 - |
1690962578.7700968-CDS-F-serratus_M_contig1008:124443..124507 | 1690962578.7700968-CDS-F-serratus_M_contig1008:124443..124507 | Fucus serratus male | CDS | F-serratus_M_contig1008 124444..124507 - |
1622928802.0316296-CDS-F-serratus_M_contig1008:131710..131876 | 1622928802.0316296-CDS-F-serratus_M_contig1008:131710..131876 | Fucus serratus male | CDS | F-serratus_M_contig1008 131711..131876 - |
1690962578.7782536-CDS-F-serratus_M_contig1008:131710..131876 | 1690962578.7782536-CDS-F-serratus_M_contig1008:131710..131876 | Fucus serratus male | CDS | F-serratus_M_contig1008 131711..131876 - |
1622928802.0469332-CDS-F-serratus_M_contig1008:132636..132715 | 1622928802.0469332-CDS-F-serratus_M_contig1008:132636..132715 | Fucus serratus male | CDS | F-serratus_M_contig1008 132637..132715 - |
1690962578.7883432-CDS-F-serratus_M_contig1008:132636..132715 | 1690962578.7883432-CDS-F-serratus_M_contig1008:132636..132715 | Fucus serratus male | CDS | F-serratus_M_contig1008 132637..132715 - |
1622928802.0635235-CDS-F-serratus_M_contig1008:135856..135898 | 1622928802.0635235-CDS-F-serratus_M_contig1008:135856..135898 | Fucus serratus male | CDS | F-serratus_M_contig1008 135857..135898 - |
1690962578.8057625-CDS-F-serratus_M_contig1008:135856..135898 | 1690962578.8057625-CDS-F-serratus_M_contig1008:135856..135898 | Fucus serratus male | CDS | F-serratus_M_contig1008 135857..135898 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1008.176.1 >prot_F-serratus_M_contig1008.176.1 ID=prot_F-serratus_M_contig1008.176.1|Name=mRNA_F-serratus_M_contig1008.176.1|organism=Fucus serratus male|type=polypeptide|length=117bp
MDESGKLIAIIGDEDTVTGFLLAGVGHRTVNTTNFLVVKNDTTVSQIEDA FNRLTAREDIAIVLINQHVAGEIRHVLSGYSKTIPTVLEIPSKDVPYDPE QDYIMQRINLMLGGGQ* back to topmRNA from alignment at F-serratus_M_contig1008:123606..135898- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_F-serratus_M_contig1008.176.1 ID=mRNA_F-serratus_M_contig1008.176.1|Name=mRNA_F-serratus_M_contig1008.176.1|organism=Fucus serratus male|type=mRNA|length=12293bp|location=Sequence derived from alignment at F-serratus_M_contig1008:123606..135898- (Fucus serratus male) ATGGACGAATCTGGCAAGCTGATTGCGATCATTGGGGATGAGGTGAGGAT
GTAACTTCCTCAGTTCAATCAAACAGCGAACCATTTCTAAGTAATCATTT
TCGTTGTGCGGGTTTGCTCACGGACTCCCGGTTCACACCTCTCGAGTCGC
CAGCGCGCTGAGTCTTCGACCTGATGTGTAGGTGCCAGAACTGAATGTTT
CCGTGCCACCTCTGCGACGATTCGCACGTGCGCCTTACCTCGATTTGCGT
TCTTCAGAAAGAGAATGCTTTCTTTTCTGTAAAAAAGAGTGTGCAGACTG
CTCGGTAGAAGTAGCTACTTGCACTACAAGCAATACAAACAAAATCAGTC
CTTTTCAACCAACTTGAGTTGACACCAGAAGCCAAACTCCGCTGCAAAGC
CACCCCACTTTATTGTGGTTTCGGTACGCATGCACTTCCGGCTGGAGAGC
TCCATCAACAGCAGTGCTGTGCCATTTTTCTCTTCCTTTGCCGAGGAGAT
AGTGGCTAGTGCGCTTTGGGTGTTTCTTCCCACGCGCGGTAGCGAAAAGC
GCCCGGTCCGTAGCTTCCAAGCTCCCTCCCTTTCTGAGATCTCTCCAAAT
ATTGAGCTTCCCATCGTGGTGATGTATGATCGAGAGGTCTTAGCATTCCT
TGCCGTGTCCTAGAGACACCCCAAAAGCAGTCGGCCCAGAAGGTTCAGGG
TCTTAGTCTGGTGTGAGTACTGTATATAGCCTCAGGCAGCAGACTTGGAA
TCTGTTGTGCCGAGGGGAGGAGCGGTTGGATAGCGCGCAGCAGGAAAATG
AGCAACAGCTCGCTGACGTTCGAGCACCGCGGTATTCGACGGTGAAAATG
GATGCTTCGAGTCCAACCCGACCAACCATGTACGGTAGTATGCATGTACA
AGTATGTATGTATGGTCATCACATATAGCAGAGAATGGATCAACCGGTTA
AGGTTGCCAATCCTGCTCGTGGTCAGCTGTACAGGGAAAATGAATATTCA
TTCCCCTGTCCCCGTGCGTGCTTGAAAATTTGGTCTCGCGAGGCGGGTTC
AGCCGTCCCGTCCCGCGTCAGCCTGCTCATCTCCATACTCGGGCTGAATT
TGGTGCTTACTTGAGGGCTTCCTCCCGAGTTCCGCGGTGGCGTCCATTTA
TGAAACCGCCATACGCCATCGGGTCAGTCCCGAGTTTATCGGGTCACGCA
ATTGGATACCGATGGCGTTCACTGCCGTGAGTCCGCCGACACAGGGCCAG
TAAACCTCAAGGTAGTTCCGAACGGGTGCTGCCTTAGCAGGTTACCATGG
ACCAATCAATCTGCGCCTCTCTTTCCCACACCCACTGTTATTGGTATGAA
GTGGTAATATTAATATTTAATAGTCATAGCATGTTGAAAGTACCGGCGTT
AAATACAAGGGTTCCTTCTAGGCACATAACTCCAACAACGCTTCCAGTGC
GATGAGTCGATCTTAGCTGCGGCAATACGTGCCTAGGGCACGGACGTGAT
TACGTCGACCTTTCCGAAACAAAATACCCGTTGAGCCAACTTTGCAACTT
TGTTCGAGTTCTCAGAGTTCAAGGCTTGGAGGCCTCCGGTCGTCATCAGT
GGAAACTTACTTCAGTGCTTGTGTGCTCGACATATTTTACATCCTCGCGG
AGCGGAGCCTTCCCGCCGCACTTTAAACGCAGTCTATAGACCTATACACC
CGCACCAGCCGACCGACACTTCGTTGAAACATGCTCGACGAGCGGCGTCA
GCACTAACTCCAGCCAAATATCGAGCCCCGCACACCTACTTCCTGCCCCC
CTTAACCTTGCCTCTGACACCTATTAATAGCGTTCAGCCCCACATTCAAG
TGTTATTCAAGTGTTATTCAAGTGATTTAAATATTCAAGTGTATGTTGGT
GGTGAAGCCGACTTAAATCCCATGACTGTACAGAAATCAGCCGATGTAGA
CTATAAACGCCGACTCATAGCACGGAGAGTAGCGCCAGCAGCCCGAGTGA
TTCTGAGTCAAACTCAAGCTTTCAGGGATGGAGATTGTTGATGGAAACGC
TGGCGCACTGGCAGCAGGTATCGCTGTCGCTGCCACGATGCGATTATTTG
TGGATACTCCAGAGACCTCGCACATTCGTACTTTAAACAGGGCCCACATA
GTTCTGAACAGCAACAGTTCTCCTCAAGAAAATGCACACCTAACGATATA
CCAAGACGCGTCCGGCCGCAAGAAGAGATCTAATGAGTAGGCTTCACGTA
GGTCTTCCTCCAACCAAACTGCTGCTGCGACTCACAGAGCAGCTACTCGC
ACAACAAATTTTCCCCGTCGAGACCACGTTTCCCAGTACCAGAGTCATAG
ATAAACTAACTGTACTGTACTATATGTACGTAGTACTATACTTCAGTAGT
TTTTAGTCTGTGCTGAAAAGATCAGAAAGAGAGAAGCAACCAGTCGTTCC
ACGCCGACGCATAGCACAGAGATCAGGGCCATGGCAGCCCGAGCGGTTAT
GAGCCAAACTCAAGCCTTTGGCGATGAAGGTTACCGAGGGAAACGATGGG
GCGGTGGCAGCAGGAATCGCTCTCGCTGCCACGATGCAGTCATTTGTTTG
TACTCTTGCGACCTCGCTGGTACAAACATGACCCACAGAGTTTAAAATAG
CTCTACTCAAGAGAATGTACACCACCAAACAAAAGCGCCGGGCCGCGGGT
GAGATTGAATTAGTAGACTTGACGTGGGTCTCCCATCAACTAAACTGTTG
CTGCAACTCACACAGCAGCTACTCGTTATACATATATCGTTTCCGCCGAG
GCCACGTTTCCCAGTAAAGTACTCGGTGCTGTGCATCTATAACACATACC
TGGTACCGGTATTATTACGTTCCAGTAACAAACTGTAGTACTGAAGTTGG
AGAACAACCTATACTTTTTTTCTGGGCATTGTCGAAGAGAGCATTAGACT
AAGAGAGCCAGAGAACGCCGTCATCTACGGGGTTTCCAGTTCATAAGAAC
GGAACGTGTAGATATATACCTTGCTTTTGATAATAGGGTTGAACCCAACT
GACCCCCAACCCACCACCTTCCCCCTGCAAGTGATTGCGTGTCCTGTTAT
TGGGCATTTGATATCTCCGGATTGGCCTGATGCCGCCGGTGCCACATTCG
CCGCCCGTTCAAACGCCGCGGTGTTTCGAGCAGGACACGGTAACCGGGTT
TTTGTTGGCGGGCGTGGGTCATCGAACGGTCAACACGACAAACTTCCTCG
TGGTGAAGAACGGTGAGTTGAAGTAACGGCTCTGTTATGTTGTATTAATA
GAGATTATAAGCGCAAACCGCGTTTGGCCACTCTACAACAGCACCGACTT
GTAGGCGTCTCGCCGATTACTCCGTCCTCTTGTCTCCCGCCGGCTGGAAG
TGTGTTGGAAGTCCTCGTGCCTCGATCGGATCGTGCACCGTTGAAACCTT
CCGCAGCGCTGGGAGCGCTCTGTTCTACAGCACCAACGAACAGCGCTGTA
GAACCTCCTGAAACGTGCCTCTCGAAATGGCACAACGAATACACTTGTGT
CACTTACAGTATAATGGCATAGTTTGGCTGGATGCTCGGCGAGGTTTTGG
GCTGGAATCACAGCGCTGACCGGAACGGGAACAAAACTGCACTTGAAGGG
GGGGGGGCAACGGGATGGTGGCTTTCCAAAGCGTTGGTACGCCCTCCAAA
GCGCCGTCATGCTCTTCCTCTGCTACAGTTGATCGCCGTGATTGGGACAC
CTGGAGCATGGTGTTTGACAAAGGATGGCCTCACGGAGGGGCTTTACGAA
TAATGTTTTTAGTGGAAAACCTGAGTGCGCCCGTATCATAATCGCTCAGT
ATTCCTTACCCCGACCCTATCGCCTGTGTACGAACCGACACAGCATTGTT
CTTTTTGAATTTGGAGCGTTTCATCCGTAACCCCCTCCCCTCCCCCCACA
TCCCTTTCCGCTCTCGCACTCGCACTCGCCGTGGCCTCCAAACACGGTGG
CGTGCGCTCTGCTGTTGGAAAGACACCACGGTTTCCCAGATAGAAGATGC
GTTTAACCGACTGACAGCGAGGGAGGATATTGCGATCGTCCTTATCAACC
AGCACGTGGCGGGCGAGATCCGCCACGTCCTGAGCGGCTACTCCAAGACC
ATCCCCACCGTGCTGGAAATCCCCAGCAAAGACGTCCCGTGAGTTACCTT
ATACTATAATAGGTGCTTAGCACAACATTGTAGCGTTTTTTTTGTAACCG
TAAACGTCAACCAGAATGTATATATAATCGTCGTCCGGAAACGTATACTC
GTAAGAGCAGAGAATACACCATGTGGAAATCAGAGAGAACGCGAACGGCA
ATCTACGGGAGAAAGGAAAGGCCGACGAAAGGCGTCTACTCTTGCAAACA
AGTGCTTGAAATAGACAGGAAATACCGTACTTCGAAGAAAATATCCACTA
TTTATATTAGTAGGAAAGAGATACCATACACGATCATCATGACCCATCAT
TCTGAATGAAACCAACAGGTTCCAAATGTACTATTTAGTATATTATAATT
AATAATATTAATATTATAGTAATGTTATTAGTATACTATTAATAGTATAT
ACGAGCTGAGCGATACTGGGTGAGGGAACGAGGAGGTACATCAATTTACC
TTGTCAAGTACGTCGAAGTTTGTACCGATACGTGATTGGGAGTCAAATAC
TGCTGTACCTGGTATCTTATTCCAGTTGGTGGACCTGAAGGAGAGTGAAG
GTTGCTGTGCAGCAGTCTTGGTGAATTGGTTGCCAGACGACGACGAATCC
CGGTTGTGATTCTATGAACAACCGAAATGAAGAACAATGTGCCGGTATCA
TATAGTACCAAATTATCAGGTACGAACGCGGACAGGGGAATATTCATATT
CTTTTCCCCGTTTAGCTGACCACGAGCAGGATTGGCAACCTTACCCGGTT
GATCCATACTCTTGCTATATGTGTGACCACACATAGGTTAGTCAGGCGGG
TTGCTGTATTTGTCGATCATTTATTTTCATTTTGTTGTTATGTTACGAGA
TGCGTTAAGGTCTACCGTAGTACAGACAGTGTGTGTGTGTGTATGCTTCC
CATGAATTCTGGACATCAATGGACGTACCAGACGGTGTCACACAGGAGGA
AAGTCACACAGGATTTTTCTTCCACCTTCCTTCTGCGGTGCGTGCCTTAA
TTTTTTTCGCGAGAAGGATTCAGCCATTCTTTTCCCTCGTCGACCGTGAA
GTCGAATTTTATGTACTAACGAATTAATCGTTCTCCACCCGTTGGGCATT
TTTATTTTAGTTTTTTAGTTTTTAGTGAGAAAAATCCCGTTTGCCGGGAT
CGAACTCACGTCCCAACGTGTCAGAAGGTTACGAGGTACCTCTGAGCTAC
CAGGGCGACCACAGTACAGTAGAGCTATACCGGTGTCTCTATAAACGGTA
GAAACGAGATACTATACTTTTAATACATGTGTTTTACTTCTACTTCTACT
ATTATACTACTATGCAAGTATACTATACTGCACTACTCTAGTTTTACTAT
TATGCAAGTATACTATACTGCACTACTCTAGTTTACTACTAGAATACTAG
CTCTATACCAGGTCCTATAATTGCGAGCGTTTAGCGAGCTTCTAATCTGT
GTGCTGTATCAATTTGAGCTCGGGTGTATCAAAATACGGGGCACTTTGAC
CAATCATGAAATGTGCCGTATGTTCCTTTTCGTAATGTGTCCACCCCAGA
ATATTCTTTTTATGGGAGACAGAAAAAAGAAATTTCTGTAGCGAAAGTTT
TGTAATATTGCTCGACAAGTTCACTTCGCTTTAGAAATCATCGGGAGGTC
GGGACTGTAGCTTCCCTCCTATCAAAGATCGGCAAAGAAGAGCTCGCTAT
TGCTGGGCCCTGGAGCAGTAGTAATAGTGCGATGGTCGCCGGAGCAGCAG
ATTTGGAGGAAATTTATAGAAGCTGTTGAGGTGATGGGCCCGAACAAGTT
GAACGCCGGCAGCGGGAGCAGTTGGATGGGTGGCTCCGGACATCAACCAG
AGACGGGCTGTGTGCGAGCGTTCGAGCTGTAAGCTACTCGTAATTAAGTA
CTAAACGACCCTGTCGCTCGAGACAAAATTCTCAGGCGCAAACGAGGAGA
GGGAAATATTAATTTCCCTGTTAGTTGGTCATACGACGAGCAGGATTGGC
AACCTTACCCGGTTGATCCATACTCTTGCTATATGTTCTGCTGGACATTT
CCTTTGTACAGACCATTACGCTCTCTTCAACAATTTCGGACCAGTGATTT
CTGCGCATAGAGTCTACTGCTGTACAGAGTACGGAAATTGCATCGGGATC
AAACATCGTTGGCGAGAGCCTGGGAGAGATGGAAAATTCATCAGTGACAC
TGAGTTCCACGCATAGAGGGTTCTGCTGAACACTCCCGTTGTACATGTGT
AGATAGACCTTCACGCTCTCCTCACGAACAATTTCAAACACCGGGTTCTG
CGCATAGACTAGAGCCTATTAATACTGCTGTACAAAGGTGTCCTATAGTA
GAAGTACTGAATTTCCATCGCGATAAAAAAATCATAGTCGAGAACCGCGG
AGAGATCTGAAAATTCGTTGACAAGATGCTGCGCATGAAGGGTTCTGCTC
AACATTCCCGTTGTACATGTGTAGATAGACCTTCTCGCTCTGCCGACGAA
CAATTACACAACAACGCTCCGCACGGAAAATGCTTTCGAAAAAAGACGAC
ACTGCCTACGTAAGAGTTTGTTTTCTTTACAATTACGCGTGGCGCTTTCA
TGTACAGTCCTGAGGACAACGCCAGTTCAACAAGCCGAACACCAACGACA
CATTGCACCAACACCTGTGTTAAGCTGACGATAGTTACCAAACTATCCTT
TAGCGAACGTATAGCGATAGCTACCCTATCTTACTACTATTAATACTACT
ATTAATAACATAATAGCTCTATACCTGGTAGATACAAGTACATAATAATA
TTCGGTAGTGCTCAACGATACTGTCTGCATCAGACATACCCACTATTACT
ACAGTTAGTACATAGCAAAAGTATAGTGGGCGTAGGAAAATAGAGGCGCA
CATTAATTGGTCATAGTCCATGATGATACCTGAAAAGGCAGCACCCGTTA
TTGGAGCTACCTTGAGGACTGCTGGCCCTGTGCCGGCGGACTCTCGGCAG
TAAACGCCATCGGTACGCAGTTGCGTGATGTGATAAACTATAATATAATA
CAGTAGGGGCTGACCCGATGGCGGTTGGCGGTATAAATAAACATATGCCA
CCGTGGAAAGCGGGAGGAATCCCGTGAGTAAGCACCAGATTCAGCCGGAG
TGTAGGGAAAGAGCAGGCTGGCGCGGGACGGGACGGCTAAACCTGTCTCG
CGGACCAAGTTTTCAGGCGCGAACGGGGACAGGGAAATATTCATTCTCCC
TGTTCAGCTGACCACGAGCAGGATTGGCAACCTTACCCGGTTAATCCATA
CTCTCCTGAAAGTGCCCATCACACCGTAAGTATGCCGCCTTCTATCAACA
TGATATTACCACTTTATACCAATAATAGTATAGTATAGTATAGTATAGTG
GGTGGGTGTGGGAAAAGAAAGGCGCGCATTAATTGGTCATAGTCCATGGT
GACCTGCAATATGGCAGTACTCGTTACTGGAACTACCTTGAGGACTGCTA
GCCCTGTGCGGGCGGACTCTCGGCAGTGAACGCCACCGGTACGCAATTGC
GTGACCCCATAAACTCGGGACTGACCCGAAGGCGTATGGCGGCTGAAATA
AATAAATGGACGCCGCCGCTGAAATCGGGAGGAATCCCGCGAGTAAGCAC
CATATTCAGCCAGAGTATGGAGAATGAGCAGGCTAACGCGGGATGGGACT
GCCGAATCCGTCTCGCGAGATCAATTTTTCAGGTGACCACGACTAGGATC
GGCAACCTTATTCGGTTGATACATACGATTGCTATATGTGTGACAATACC
ATACCACACCTACGCTTTCTATGTTTACAGTTTGTATACTTCCAAGTCTG
TGTACAGTAGTCGCTTCATGTTTGATTACATACATTTGTTTGTTCTTCCA
AGTCGGTGCTGGGTTGATCATGGTGATGCCTCCGGGTAAAATTGAAGGCT
CTTCCCCGGCGATTCGACTCAAGGAAGCTTTTGAACTGGTAAAATCTGCT
CAGACCATCATTTCGCATATTTTGCCTCTTTCTTTGTCGTTCTTAAAAAG
GAAAGAGTTTCATGTCCGAACGTGCTTTATCACAGATATTTTAAAGATAT
TGTACCCACAGACCCGCTCGAATTTTCGAAAAATAGTCGACACAGCTAGA
GGAGAAAACACTTTTTCTGCCATATCCAGCTTCTGGATAAAAAAAAGTCC
ACGCTTGCGACCTTTGTGCTGCCTGTTGTGCTTTGCAAGAAGTAACATAT
ATTGTTTTTCTATTTTTCCTGAGCATCTCGTAGGCAGTAAACAGATAACG
TATGTATCATATATAGCATACTATATAACAGATAATAACAAGTCTAACAG
ATAATGGCAGATACTGACAGATTTTGAGTTTCGCTATTAATAGGCCGACA
AGTTCGCCCAGGAAAAACATTGGCGAAAATCGAAGAGGCTGGTCTCCTAC
GGCCCCATGTTTTCCCCACCCAACCGACTGTCGAGGTCTCCGCGCGTTTT
TTCCCATTTTTTGACGGCCCATGGCACCAGCCTTGGTGACTAGATTGGTT
GTGAGTGGGCGATTACCGCGATCAAAGTTTCCTGAGGTATGCTACGCCCC
CCACTGTCGAGCTGTGCTGCTGCTGCTGAACCAGCCAGTAACCACACCCT
GGACGATAGGCAATAGGACTATTGCCTATCGATAGGATCCTATCGATATG
GGAGGGCTGCTGCTGCCTACGAAGGGTATCGATCGGTAATTCAGGCCCCT
ATTGGCGACGGCAAATGAGTATTGATTCTCACTTTCAAGGACTATCGCAT
ATTACGATAGTCTATTGACAATAAACTTCCACCCTATCGTAGTAAATCAA
TACCCATCGATAGGCATTGCCATCATCATATTGTTCCGACAATAAATATC
GATATGCGGTTCTCGCACCCTATTGAGATCACAATAGACATCGATAGGCA
TTGCCATCATCATAATGTTCCGACAATACATATCGATATGCGGTCTCGCA
CCCTATTGAGATCACAATAGACATCGATAGGCATTGCAAACTTCATATTG
TTCCGACAATAAATATCGATATTGTGATGTGTTACCTGACACCTTCACAA
TTCATATCGTCGACCCATATTGTTCCGACAGGCTCCACGGCCGGGGCGGG
CTATTTGGCCATTCGAAGTTAAAAAACAGATTTCCCGGTACCATGGGTAT
GAGATTCGAGATTCATTTTTTTCGTGTTCGCAAAAATGCCGGATTTTGTT
TTTCCGATATGAAATATTGTTCTTCTTCCACCAAAAGAAGTACATACCTG
GTATATATATCATGGTGCCAGCCGATACAGTAGTGTCCTGTACCTGGTGT
CAGGTGTGCCCCTTATACCCTGGACGATATGCGATTGGATCGGATATCGG
ATTTTCGATAGGCCAGAAATTGTCCATATCGATACCTATCGTAGCCCATC
ACGCCAGAGGATTCGAGGCTATCGATATGTATCGGAAGCAGACGATAGGT
CGGTGCAATAGGCCACGATAACATATTGCGCAATCAATAGGGTGGAGGGA
GCGGCCTATCGATAGGTATTGAAAAAACCGGCAGGGTTGCGCAATCTTCG
CCGGCAGCTATCGCAAAAAGAAATAGCGTGTTTGAGTGACGATCGATACC
TATCGCTTTGAACGATAGGCGAAGTCAATGATCGATCAATGCCTATTGGC
TTTTAACAATATGTGAGTCGATACCAATTGGTCGTCGATACCCATCGGTG
TGGACGATATATGGTGCCTATTGATTCTATTTCGTGCATCCATATATCCA
TATATAATATGTATATATTAATATTAATATACGTATGTATACGTATACAT
ATTATATTATATATTACTCGGAGTATATATTATATAGGAGTATATAAATA
ATATAATACAAATATATTGTAATATATTACTATACTATATAGTATAGACT
AATATATATTATATTAATTAATAATATAAATATAATATTACTCCGATTAT
ATTATTTTTATACATGCAAATAATACAATTATGTATATATATAAATATAA
TAAGTATAATTTTAATTTATTTTATTATATGTATTATATAAAAACATTAT
ATATATTAATAGAATTTATTAATATAATATATATAGATATAGACAATATA
TATTAATATTGGCATATAATAATATATTATATATATGTGTTATATATAAT
ATATATTTTGAACATTAAATATATACTTTTATATATTATTATCAATTATT
AATACATGTATAGAAAGTGGTAGAAAAGGGGCTGGTGTGTTATTAATAAT
ATAATACAAATAGGTGAGCGGAAAGATAACTATGCTTGCACAATGTCGTG
TCGTCGTTAGCGCGTACGGAAATGCTCGCATTATATTATATTCATTTTAT
GATATCGGTCTTCTCGCGATAGGCATCGATCGCCCTACGAAGGCCTATCG
ATCAAGCAAATAGGTATCGATTGGACGTAGGGTATGATATCGATCTAGCA
ATAGGCATCGATCGCCCTACGAAGACCTATCGATAAAGCAAATAGGTATC
GATTGGACGTAGGGTATGATATCGATCTAGCAATAGGCATCGATCGCCCT
ACGAAGACCTATCGATAAAGCAAATAGGTATCGATTGGACAATGAAACAT
CGTATTGATAACGCAATAGGTATCGATCGCACCGTACCCAACTATATCGA
TCAGGCAATAGCTACCAATCGGATGTACAGCACCTCATCGATAAATCCAA
TAGGTATCGATCGCATCTGACGACACCCTATTTCCGAAACCAATAGCTAT
CGATCGTGTTTTAATATTCGATATTGAAATTCCGATATACGATCATGTTA
ATTTTTCCGAACCTATTTCCGAAAGCAATAGGTATCGATCGGGGATTTCG
AAATCCGATTGCACCCGCAATACCTATCGATATGCCACACACGAAGCCTA
TCAAAATTCCGATATGCGATTCAATAGGCTATCGTCCGTTATGTGGCCAG
TACATCGTTCGGTGCTGATGGCTAAAAAGAAAAACCACCCGCGACAAAAG
CGGTAGAAAGAGTACAGGTGTTCGTGCGCCCGGCGATCAGCAACGCTGCA
AGTCCTTCTCGCTCATACAACGGTGCCTCCGCCACCGCATATACGTCCGT
CTCCCCCGAATGTATGCACCTCGGCTGTTTTGTCCGAACAGGTACGACCC
GGAGCAGGACTACATCATGCAGAGAATCAACCTCATGCTCGGAGGAGGAC
AATAAGTGATTGTATATCCGAGTGTTGTATTGACGGAATGTGTCCAAAGT
CGTCGCGGACGGCGAGGGCCTCAAATCGAAGGGGAAATGCGACGTCCGCG
GAGCTGCAGAGGTGGCTTACTGCAAAAGGAGGGGTACCCCTGCCCTTTAT
GACCCAACCATCGGAGGGAGATCTTCCGGTAGCGAAAACAGATGGCGGCG
ACAAAAGCTTCACTTGTGTAACGACACGGCTTTGATTGCCGTAGGGCATG
TAGGTCAGTCTTTGCCTGTGTTTTTTTTTAAGCTCTCGCGCCCTTCGTAC
AAACAACGAGTCGATTTCCCTCGTCAAATCGCGGTTTACGGTTTGCGCTA
AACTTGTATGGACGATACGAACATTGTCTTAGACGTACTGGATAACTGTA
CCGGGCGTAGTTTCGATTAATGCAGTAGAACTACATTATTATTGGGGAGG
TCATCACCTTCAGTAGAGTAGATTGAGAATCAACCGGGAGTACGGTACCG
TTGCGAATCCTTCTTGTGGTCAACTGAACAGGGAAAGTATTTTTTCCCCT
TCTTTCCCCGTTCGCGCCTGAGAAGCTGGTCTCGCGGGACAGGTTCGGCC
GTCCCGTCCAGCCTCAGCCCACCCGTCCATTTTCCACACTCAAGGCTGAA
TCTGATGCTTTCTTACGGCCTCATCTCCTCCCTCCCGCTTTCCTGGGTAA
AGCAGTCTGGGAAAGGTTATCCTACTACAGTACAGTATACAGTGTACCAA
GAAGGGTGCAGTGGCTGTCCGCGATCTGCTGTGTGTACGCCTATCTTTCA
TCTGCCCACCTACGTGCTGCAGTTTTCACCCCACCGGTTCGCG back to topCoding sequence (CDS) from alignment at F-serratus_M_contig1008:123606..135898- >mRNA_F-serratus_M_contig1008.176.1 ID=mRNA_F-serratus_M_contig1008.176.1|Name=mRNA_F-serratus_M_contig1008.176.1|organism=Fucus serratus male|type=CDS|length=702bp|location=Sequence derived from alignment at F-serratus_M_contig1008:123606..135898- (Fucus serratus male) ATGGACGAATCTGGCAAGCTGATTGCGATCATTGGGGATGAGATGGACGA ATCTGGCAAGCTGATTGCGATCATTGGGGATGAGGACACGGTAACCGGGT TTTTGTTGGCGGGCGTGGGTCATCGAACGGTCAACACGACAAACTTCCTC GTGGTGAAGAACGGACACGGTAACCGGGTTTTTGTTGGCGGGCGTGGGTC ATCGAACGGTCAACACGACAAACTTCCTCGTGGTGAAGAACGACACCACG GTTTCCCAGATAGAAGATGCGTTTAACCGACTGACAGCGAGGGAGGATAT TGCGATCGTCCTTATCAACCAGCACGTGGCGGGCGAGATCCGCCACGTCC TGAGCGGCTACTCCAAGACCATCCCCACCGTGCTGGAAATCCCCAGCAAA GACGTCCCACACCACGGTTTCCCAGATAGAAGATGCGTTTAACCGACTGA CAGCGAGGGAGGATATTGCGATCGTCCTTATCAACCAGCACGTGGCGGGC GAGATCCGCCACGTCCTGAGCGGCTACTCCAAGACCATCCCCACCGTGCT GGAAATCCCCAGCAAAGACGTCCCGTACGACCCGGAGCAGGACTACATCA TGCAGAGAATCAACCTCATGCTCGGAGGAGGACAATAAGTACGACCCGGA GCAGGACTACATCATGCAGAGAATCAACCTCATGCTCGGAGGAGGACAAT AA back to top
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