mRNA_F-serratus_M_contig1008.171.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1008.171.1 vs. uniprot
Match: D7FKD4_ECTSI (EF-hand domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKD4_ECTSI) HSP 1 Score: 399 bits (1024), Expect = 2.690e-130 Identity = 233/398 (58.54%), Postives = 278/398 (69.85%), Query Frame = 3 Query: 648 VAADRVFEFGQLFQKYDTDGDGRLGRAEFERMIGGMLDGLGRAKNSSKEAHPDDNQDYGRRGGQGADKAAVETNGGGRPKDVSWELGNAPLVAPAPSSPLSGGGAITHYDETTGVPLSREAVASQQTLGHTVVPLNEAYSRRLSRLQTLLSSRLMPVREQLLQLRRRYHTRADEVKAARATIERETMADGGVILERLRSAEALKQAKLTQGVNDVTAELEGIERISDQSQATLVTLPFSAP-FLPAGLRYAHDPESTGKMVELIQSYRELCGCIDSAASKPFDKTVDVRVDDLPHETAERLEVLQRADHYERALSVKEHMLWTTIQESHALEERYHQERNLGQEFAEEAQKWVALAGRLSDDVNALKKEVEQTERLREENTILARENRNLLLRLEELE 1838 + ++++FEFGQLFQK+DTDGDGRLGRA+FERM+GGML + +G RG G + SP+ G +ITHYDETTGVPL+REAVASQQ LGHTVVPL EAYSRRLSRLQ+L SSRLMPVRE+LLQLRRR H R +E+ AARA IERET+AD I+ERLRSAE LKQA L QGVN VTAELEG+E++SDQ A + LP S P + A D E T +MVEL+QSYRELC ID A+KPFD ++DV+ DD HETAERLEVL+RAD YE ALSVK+ MLW +QES LEE+ +ER+LGQEFAEEAQ+WV L +LSD VNAL E E+T +LR+EN +LAREN+ L+ RLE LE Sbjct: 1 MGSEKIFEFGQLFQKFDTDGDGRLGRADFERMVGGML------------------EQFGERGEDGT-RRGXXXXXXXXXXXXXXXXXXXXXXXXXXXSPV--GPSITHYDETTGVPLAREAVASQQALGHTVVPLREAYSRRLSRLQSLASSRLMPVRERLLQLRRRLHGRGEELTAARAAIERETLADAEAIVERLRSAETLKQATLAQGVNSVTAELEGVEKLSDQV-ARVTLLPSSTPGSMSPSAACAPDFEGTERMVELVQSYRELCNSIDRVANKPFDPSIDVQADDFSHETAERLEVLRRADRYEHALSVKDQMLWEAMQESQRLEEKCQEERSLGQEFAEEAQEWVTLTEKLSDRVNALTVETERTAQLRKENALLARENQELVRRLETLE 376
BLAST of mRNA_F-serratus_M_contig1008.171.1 vs. uniprot
Match: A0A6H5JBH8_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBH8_9PHAE) HSP 1 Score: 375 bits (963), Expect = 1.670e-120 Identity = 236/474 (49.79%), Postives = 283/474 (59.70%), Query Frame = 3 Query: 516 RFATNGGVDAKSFQRMWRERDK--ARAGTTAVADLGRDQELG--------------GSGGVAADRVFEFGQLFQKYDTDGDGRLGRAEFERMIGGMLDGLGRAKNSSKEAHPDDNQDYGRRGGQGADKAAVETNGGGRPKDVSWELGNAPLVAPAP------SSPLSGGGAITHYDETTGVPLSREAVASQQTLGHTVVPLNEAYSRRLSRLQTLLSSRLMPVREQLLQLRRRYHTRADEVKAARATIERETMADGGVILERLRSAEALKQAKLTQGVNDVTAELEGIERISDQSQATLVTLPFSAPFLPAGLRYAHDPESTGKMVELIQSYRELCGCIDSAASKPFDKTVDVRVDDLPHETAERLEVLQRADHYERALSVKEHMLWTTIQ--------------------------------ESHALEERYHQERNLGQEFAEEAQKWVALAGRLSDDVNALKKEVEQTERLR 1775 RFA NGGVDAK FQR+WRER+ + D+G +E G GGV +++FEFG+LFQK+DTDGDGRLGRA+FER++GGML+ +G RGG G + + GG + GNAP AP P G +ITHYDETTGVPL+REAVASQQ LGHTVVPL EAYSRRLSRLQ LRRR H R +E++AARA IERET+AD I+ERLRSAE LKQA LTQGVN VTAELEG+E++SDQ+ ++ L A D E T +MVEL+QSYRELC ID A+KPFD T+DV+ DD PHETAERLEVL+RAD YE ALSVK+ MLW +Q ES LEE+ +ER+LG+EFAEEAQ+WV L G+LSD VNAL E E+T +LR Sbjct: 7 RFARNGGVDAKDFQRVWREREHLFSEPDPAPGGDVGGREEASRPGGEARREGRREEGGGGVGPEKIFEFGKLFQKFDTDGDGRLGRADFERLVGGMLEQVGE------------------RGGDGTRRGS---RGG------EXDNGNAPSAAPQPLPXXXXXXXXXAGPSITHYDETTGVPLAREAVASQQALGHTVVPLREAYSRRLSRLQ----------------LRRRLHGRGEELRAARAAIERETLADAEAIVERLRSAETLKQAMLTQGVNSVTAELEGVEKLSDQTACRVLM----------DLVCATDFEGTERMVELVQSYRELCNSIDRVANKPFDPTIDVQADDFPHETAERLEVLRRADRYEHALSVKDQMLWEAMQVSDCRLQSSEMLADKVASEVSPVVSLTTALSSESQRLEEKCQEERSLGREFAEEAQEWVTLTGKLSDRVNALTVEAERTAQLR 427
BLAST of mRNA_F-serratus_M_contig1008.171.1 vs. uniprot
Match: A0A835Z0R6_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0R6_9STRA) HSP 1 Score: 277 bits (708), Expect = 2.140e-82 Identity = 176/406 (43.35%), Postives = 243/406 (59.85%), Query Frame = 3 Query: 666 FEFGQLFQKYDTDGDGRLGRAEFERMIGGMLDGLGRAKNSSKEAHPDDNQDYGRRGGQGADKAAVETNGGGRP---------KDVSWELGNAPLVAPAPSSP----------LSGGGAITHYDETTGVPLSREAVASQQTLGHTVVPLNEAYSRRLSRLQTLLSSRLMPVREQLLQLRRRYHTRADEVKAARATIERETMADGGVILERLRSAEALKQAKLTQGVNDVTAELEGIERISDQSQATLVTLPFSAPFLPAGLRYAHDPESTGKMVELIQSYRELCGCIDSAASKPFDKTVDVRVDDLPHETAERLEVLQRADHYERALSVKEHMLWTTIQESHALEERYHQERNLGQEFAEEAQKWVALAGRLSDDVNALKKEVEQTERLREENTILARENRNLLLRL 1826 FE GQLF+++D+D DGRL RAEFE+++ + ++ PD +Q A A G P + ++ + N PAP++ L G +THY+ET GVPL ++AV Q LGHTVVPL+EAYSRRL+RLQ L++S+L+P REQLLQLRRR R +EV++A+A IERETMAD ILERLRSAEALK A L Q ++DV ELE ++R++ Q T A RY H+ EST KM+EL+QSY +LC ++ AAS+ D ++ V +D P ETAERLEVL+RAD YE+AL++K+ M+W +QE+ + E+ E L +E+A E +WV L RL+ ++ L+ E + L +EN L +NR L RL Sbjct: 48 FEIGQLFERFDSDKDGRLTRAEFEKLMNLRVQ-------QQRQQAPDPDQ-------YSAATAPTRLPGSPSPPRPPHHQRQRHMAADAPNMRWSQPAPAASAAAPSYGYPILPGALPLTHYNETAGVPLRKDAVEEQVALGHTVVPLHEAYSRRLARLQALVTSKLLPAREQLLQLRRRLLARGEEVQSAKAAIERETMADAHTILERLRSAEALKMATLEQRMSDVATELEQLDRLAQQVAGAAGTQEQGGGMAGAE-RYTHEFESTAKMIELVQSYGDLCASVERAASRLQDTSIAVTPNDFPQETAERLEVLRRADRYEKALAIKDQMIWNLMQEASHVVEKATAEAVLSKEYANEMAEWVDLTNRLTAQISELRLENARVPALEQENAKLEEQNRMLRARL 438
BLAST of mRNA_F-serratus_M_contig1008.171.1 vs. uniprot
Match: A0A7S3MHC0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MHC0_9STRA) HSP 1 Score: 106 bits (264), Expect = 1.910e-22 Identity = 56/120 (46.67%), Postives = 79/120 (65.83%), Query Frame = 3 Query: 963 ITHYDETTGVPLSREAVASQQTLGHTVVPLNEAYSRRLSRLQTLLSSRLMPVREQLLQLRRRYHTRADEVKAARATIERETMADGGVILERLRSAEALKQAKLTQGVNDVTAELEGIERI 1322 +THYDET GV ++R V +++GH +VPL +AY R +L+ +L+ RL+P RE LLQLRR+ ++EV A + IE+ET D IL RL SAE+ +QA + V + EL+GIERI Sbjct: 72 LTHYDETAGVAIARYDVDQNKSMGHIIVPLTDAYKSRYEKLRAILTGRLLPKREHLLQLRRKLQKASEEVHAKKENIEKETRTDTDQILRRLDSAESFRQAAILSQVMKIDEELQGIERI 191
BLAST of mRNA_F-serratus_M_contig1008.171.1 vs. uniprot
Match: A0A7R9UFR6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UFR6_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 4.010e-14 Identity = 51/130 (39.23%), Postives = 76/130 (58.46%), Query Frame = 3 Query: 1119 REQLLQLRRRYHTRADEVKAARATIERETMADGGVILERLRSAEALKQAKLTQGVNDVTAELEGIERISDQSQATLVTLPFSAPFLPAGLRYAHDPESTGKMVELIQSYRELCGCIDSAASKPFDKTVDV 1508 REQL+ L RR +R D+++A RA +ER TM D I+ERLRSAEALK + L ++++ A+LE I+R+++Q + + + G HD G + E+IQ + ELC ID +S+P V V Sbjct: 2 REQLMNLLRRTRSRMDDIRARRAAVERTTMQDVESIVERLRSAEALKLSTLGGQLSELQADLEAIDRVTEQVEGARSSGGVGTGVVDVG---GHDLGPLGSL-EIIQMFPELCATIDRLSSRPVGGLVHV 127
BLAST of mRNA_F-serratus_M_contig1008.171.1 vs. uniprot
Match: A0A7R9YGK8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YGK8_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 9.920e-14 Identity = 39/88 (44.32%), Postives = 62/88 (70.45%), Query Frame = 3 Query: 1479 SKPFDKTVDVRVDDLPHETAERLEVLQRADHYERALSVKEHMLWTTIQESHALEERYHQERNLGQEFAEEAQKWVALAGRLSDDVNAL 1742 S+P VDV VDDLP ETAERLEVL+RAD YE AL++K+ MLW +QE AL ++ ++ ++F +E W+ L+ ++++++++L Sbjct: 1 SRPVGALVDVPVDDLPTETAERLEVLRRADKYEEALALKDAMLWELLQERDALTDKQEKDGKTLKDFEDEMANWLVLSDKMAEEISSL 88
BLAST of mRNA_F-serratus_M_contig1008.171.1 vs. uniprot
Match: A0A7S1C795_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C795_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 3.900e-12 Identity = 62/181 (34.25%), Postives = 86/181 (47.51%), Query Frame = 3 Query: 1056 EAYSRRLSRLQTLLSSRLMPVREQLLQLRRRYHTRADEVKAARATIERETMADGGVILERLRSAEALKQAKLTQGVNDVTAELEGIERISDQSQATLVTLPFSAPFLPAGLRYAHDPESTG----------KMVELIQSYRELCGCIDSAASKPFDKTVDVRVDDLPHETAERLEVLQRAD 1568 EAY +L L ++ S+ LM RE+++Q RA+EVKAAR IERET AD IL RLRSAEA K + L+ ++++ ++ I+ F A F A H + G +Q + EL D A+KP +VDVR DD E R E +RA+ Sbjct: 11 EAYRAKLGSLASV-SATLMAKRERIVQQALSVQARAEEVKAARRAIERETTADTEAILHRLRSAEAFKLSLLSHDLSELQVDIAAIDA-------------FQAQFAQA-----HPQQGGGGGMXXXXXXXASAAFLQKFPELAAEADRLAAKPVKLSVDVRADDFDREVFRRNEAARRAE 172
BLAST of mRNA_F-serratus_M_contig1008.171.1 vs. uniprot
Match: A0A830HAQ0_9CHLO (Uncharacterized protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HAQ0_9CHLO) HSP 1 Score: 60.1 bits (144), Expect = 9.130e-6 Identity = 63/252 (25.00%), Postives = 106/252 (42.06%), Query Frame = 3 Query: 954 GGAITHYDETTGVPLSREAVASQQTL--GHTVVPLNEAYSRRLSRLQTLLSSRLMPVREQLLQLRRRYHTRADEVKAARATIERETMADGGVILERLRSAEALKQAKLTQGVNDVTAELEGIERISDQSQATLVTLPFSAPFLPAGLRYAHDPESTGKMVELIQSYRELCGCIDSAASKPFDK---TVDVRVD----------------------DLPHETAERLEVLQ-RADHYERALSVKEHMLWTTIQE 1625 G + +D+T+G PL ++ ++ GH +V L +AY +LS +Q ++ LM R+++L+ R + DEV R ER A +E LRSAE LK L + +++ +++ I+R + + ST V + +R L + +KPF + VDV+ D P + AE L+ LQ R +R L+ K+ M+W + E Sbjct: 157 GAYVRAFDDTSGQPLLADSSILEELRRNGHVIVDLMDAYRSKLSAMQNKINGSLMAKRDRILRQLARVQAKKDEVTYHRQATERARTAALQEHVESLRSAERLKLLLLARDHEELSRDVDHIQRFIAEVASC---------------------SSTNDPVHFLTQFRALDDACERLCAKPFKEGEIAVDVKADGGASIAPPNLSTNAPASSAQQPQPPMDAAEELKDLQQRHAALKRLLAAKDEMIWHLLDE 387
BLAST of mRNA_F-serratus_M_contig1008.171.1 vs. uniprot
Match: C1MVF2_MICPC (Predicted protein n=1 Tax=Micromonas pusilla (strain CCMP1545) TaxID=564608 RepID=C1MVF2_MICPC) HSP 1 Score: 56.2 bits (134), Expect = 8.310e-5 Identity = 56/220 (25.45%), Postives = 95/220 (43.18%), Query Frame = 3 Query: 1059 AYSRRLSR-LQTLLSSRLMPVREQLLQLRRRYHTRADEVKAARATIERETMADGGVILERLRSAEALKQAKLTQGVNDVTAELEGIERISDQSQATLVTLPFSAPFLPAGLRYAHDPESTGKMVELIQSYRELCGCIDSAASKPFDKTVDVRVDDLPHETAERLEVLQRADHYERALSVKEHMLWTTIQESHALEERYHQERNLGQEFAEEAQKWVALAG 1715 AY+ R L ++ L+ R+ +L R + EV R +ER+ ++ L+RL SAEALKQ K+ + V+++ + I ++ + +A SAP D S+ E + YR + D A + + +V D E + D R L+VK++M+WT ++E A +E + + EE + A AG Sbjct: 79 AYAANCRRTLHYAVNGTLLAKRDHILHQIGRLRAKMLEVAHVRGVMERDIQSEASEALQRLASAEALKQMKVQREVDELARHADAINVLAAEVEAVT-----SAP----------DAMSS----EFLGRYRAMYDACDRLARRSLPEPAEVNALDFEREARVYTAASKERDALSRLLAVKDNMIWTLVEERDAAKEELADAQREIDQLKEELDEMRAAAG 279 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1008.171.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1008.171.1 >prot_F-serratus_M_contig1008.171.1 ID=prot_F-serratus_M_contig1008.171.1|Name=mRNA_F-serratus_M_contig1008.171.1|organism=Fucus serratus male|type=polypeptide|length=550bp MPSSKDRKKETEKATKSKSSSKEKKKKSSSKDRRSKSPTRSRKKPGADREback to top mRNA from alignment at F-serratus_M_contig1008:40591..47305+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1008.171.1 ID=mRNA_F-serratus_M_contig1008.171.1|Name=mRNA_F-serratus_M_contig1008.171.1|organism=Fucus serratus male|type=mRNA|length=6715bp|location=Sequence derived from alignment at F-serratus_M_contig1008:40591..47305+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1008:40591..47305+ >mRNA_F-serratus_M_contig1008.171.1 ID=mRNA_F-serratus_M_contig1008.171.1|Name=mRNA_F-serratus_M_contig1008.171.1|organism=Fucus serratus male|type=CDS|length=3300bp|location=Sequence derived from alignment at F-serratus_M_contig1008:40591..47305+ (Fucus serratus male)back to top |