mRNA_F-serratus_M_contig1005.156.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1005.156.1 vs. uniprot
Match: D7FTI1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTI1_ECTSI) HSP 1 Score: 394 bits (1011), Expect = 8.340e-118 Identity = 243/522 (46.55%), Postives = 328/522 (62.84%), Query Frame = 2 Query: 38 PLAMNIEDLIRFVAPEMANTDE-FPIESVVVS-PGSGSRDT--EIPNGLLHALASTLDAACDEMEDKIVVVREHAEAGAETAWRLHTDAPILAEIDHAIATRAVGDGKATGMVRRVRDMAKQVKSNVVTEWKAWEVDVMTRLNIDAEKALAQVSEAGSALTARGNEIKEMISLTDRARRSI----KREESRASVRSRMEKTEAALAKTRSEIGALEAEVEALRKLNEEASRKKMVLMEGKARREERINAADKRRASVVELMNLETKCFQLEREGLDWDEKLKMHMGLMLWTRPIKLLPDEIMLSYAAPHDSTLHHQLHFALSDRPGVRANAVTVRQTSLPSDAAARTFKSPAVTVGNESSASGRLSRLIFAEGEGRCGLFSGGECPGAAISGLRLVENVGDMRENVQMADWYVGRAYGLLQELHDLEKKYACTVVQHPEDGLPASRAMLTVEIANWRTRITL-RLRFRVSTSFGCCIGRPEVEVDVGDLEARAVDTAIRKAGGDRAGIFALTKAVRAAVACI 1576 PL M +EDLI+F APE + + + S+VV G+ SRD ++P+ L++A+A LD A EME+ + HA E AW+ H+ PIL EID IA + RVR +A Q+ + + + AWEV V+TR+ +A K L++VS++ AL RG+E+++++S D A ++I ++EE RASVRS++ KT + ++++ LE E+ AL + + KK L+EGKARREER AA KR ASVV LM LE K E+E L+ EKL + +GL LW +PI LLPD++M+++AAPHD L HQL F + + VR P + K TVG+ +SASGRLSRLIF EGEG G+F G E G A++GL V+ V DMR VQ A+W+V RAY LLQE+HDLEKKYACTV DG A+ A+L VE+ANWR++ L RLRF +STSF C +G P VEVD+G LE VD AIRKAGGDRAG+ ++TK V AA AC+ Sbjct: 792 PLRMGMEDLIKFAAPEGVDRERRWATRSMVVPLKGTLSRDRLRDMPDELVYAIAGALDDAAIEMEEWAEGKKTHAVNCGEMAWKYHSQVPILGEIDRVIAEGEESSAANGDLASRVRGLAAQINAGMERQIGAWEVTVLTRIADEATKVLSKVSQSREALVKRGDELEDLMSHADLAEKAIAEEIRQEEQRASVRSQIAKTAERTKEVQADVCGLEEELAALELRQQAVAAKKAALLEGKARREERAKAAAKRSASVVRLMELEAKSIGFEKEALEMKEKLDVQLGLRLWCQPITLLPDKVMVAFAAPHDWALKHQLKFVVDETSAASGTCTMVRGPK-PEKRGVLSKKGGMATVGDMNSASGRLSRLIF-EGEG--GIFGGAE--GMAVAGLAWVKTVADMRTEVQNAEWFVSRAYSLLQEVHDLEKKYACTVTVVENDGASAAVAVLCVEVANWRSKQKLVRLRFGLSTSFACLVGAPLVEVDIGSLEVSVVDEAIRKAGGDRAGLMSITKGVEAAAACM 1307
BLAST of mRNA_F-serratus_M_contig1005.156.1 vs. uniprot
Match: A0A6H5KY64_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY64_9PHAE) HSP 1 Score: 227 bits (578), Expect = 1.130e-63 Identity = 140/279 (50.18%), Postives = 177/279 (63.44%), Query Frame = 2 Query: 644 EIGALEAEVEALRKLNEEASRKKMVLMEGKARREERINAADKRRASVVELMNLETKCFQLEREGLDWDEKLKMHMGLMLWTRPIKLLPDEIMLSYAAPHDSTLHHQLHFALSDRPGVRANAVTVRQTSLPSDAAARTFKSPAVTVGN---ESSASGRLSRLIFAEGEGRCGLFSGGECPGAAISGLRLVENVGDMRENVQMADWYVGRAYGLLQELHDLEKKYACTVVQHPEDGLPAS---RAMLTVEIANWRTRITL-RLRFRVSTSFGCCIGRPEVE 1459 ++ LE E+ AL + + KK L+EGKARREER AA KR ASVV LM LE K +E+E L+ EKL + +GL LW +PI LLPD++M+++AAPHD L HQL F + + VR P + K TVG+ E+SASGRLSRLIF EGEG G+F G G A++GL V+ V DMR VQ A+W+V RAY LLQE+HDLEKKYACTV DG A+ A+L VE+ANWR++ L RLRF +STSF C +G P+VE Sbjct: 120 DVCGLEEELAALELRQQAVASKKAALLEGKARREERAKAAAKRSASVVRLMELEAKSIGIEKEALEMKEKLDVQLGLRLWCQPITLLPDKVMVAFAAPHDWGLKHQLKFVVDESSATSGTCTMVRGPK-PEKRGVFSKKGGMTTVGDVGCENSASGRLSRLIF-EGEG--GIFGG--AGGMAVAGLAGVKTVADMRTEVQNAEWFVSRAYSLLQEVHDLEKKYACTVAVVEHDGASAAVEKAAVLCVEVANWRSKQKLVRLRFGLSTSFACLVGAPQVE 392 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1005.156.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1005.156.1 >prot_F-serratus_M_contig1005.156.1 ID=prot_F-serratus_M_contig1005.156.1|Name=mRNA_F-serratus_M_contig1005.156.1|organism=Fucus serratus male|type=polypeptide|length=515bp MNIEDLIRFVAPEMANTDEFPIESVVVSPGSGSRDTEIPNGLLHALASTLback to top mRNA from alignment at F-serratus_M_contig1005:66496..76067+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1005.156.1 ID=mRNA_F-serratus_M_contig1005.156.1|Name=mRNA_F-serratus_M_contig1005.156.1|organism=Fucus serratus male|type=mRNA|length=9572bp|location=Sequence derived from alignment at F-serratus_M_contig1005:66496..76067+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1005:66496..76067+ >mRNA_F-serratus_M_contig1005.156.1 ID=mRNA_F-serratus_M_contig1005.156.1|Name=mRNA_F-serratus_M_contig1005.156.1|organism=Fucus serratus male|type=CDS|length=3090bp|location=Sequence derived from alignment at F-serratus_M_contig1005:66496..76067+ (Fucus serratus male)back to top |