|
Homology
BLAST of mRNA_F-serratus_M_contig1004.145.1 vs. uniprot
Match: D7FH15_ECTSI (Palmitoyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FH15_ECTSI) HSP 1 Score: 213 bits (542), Expect = 3.670e-62 Identity = 112/194 (57.73%), Postives = 135/194 (69.59%), Query Frame = 3
Query: 366 GSSIVEGLSSRDRHH---RQVARSTKRLLLAKPTPSEPITDPFAFVCDIARRPKFGHQYILCPSRSRRHRGEPIGLSVGPHWSGVLYTISMIAVVTLFLTRVVLN-DVAPWCQPAGVVCALITTALLLATAVTDPGIVVQGAEGGEGEGSEYCEECSIWRPDXXXXXXXXXVCILGLDHHCLWMGKWTGQHTVV 935
GS V + H R V+R ++ + +A P P EPITDPFAFVC++ARRPKFGHQY+LCP RSRR +GLSVGPHW+GV+YTISMI V+TLFL RV++ +VAPWCQP V C+++T LLATAV DPGIVV+ AE EG YCEECSIWRP XXXXX I GLDH WMGK G+ ++
Sbjct: 43 GSGTVREXXXXXQDHTRDRAVSRPSRGIQVATPAPFEPITDPFAFVCEMARRPKFGHQYVLCPERSRRRGDRRVGLSVGPHWAGVIYTISMIFVITLFLVRVLIGPNVAPWCQPVIVACSMVTVVFLLATAVADPGIVVESAES-EGASCGYCEECSIWRPQGAEHXXXXXXXIFGLDHXXPWMGKCVGRGNIL 235
BLAST of mRNA_F-serratus_M_contig1004.145.1 vs. uniprot
Match: A0A6V1ME69_HETAK (Palmitoyltransferase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1ME69_HETAK) HSP 1 Score: 94.7 bits (234), Expect = 1.660e-18 Identity = 59/161 (36.65%), Postives = 81/161 (50.31%), Query Frame = 3
Query: 474 TDPFAFVCDIARRPKFGHQYILCPSRSRRHRGEPIGLSVGPHWSGVLYTISMIAVVTLFLTRVVLNDVAPWCQPAGVVCALI----TTALLLATAVTDPGIV----VQGAEGGEGEGSEYCEECSIWRPDXXXXXXXXXVCILGLDHHCLWMGKWTGQHTV 932
TDPF F+C P G+ YIL + G+P ++VGPHWSG ++T +I T FL +V W +PA + +TA L A TDPGIV A +G +C++CSI++P+ VCI G DHHC WMGK G+ +
Sbjct: 55 TDPFYFICKRFGFPMLGNNYILRTTDD----GDP-RMTVGPHWSGTVFTTVIILSGTYFLAPLV------WGRPAALAATAFFFGCSTASLWLVACTDPGIVRRATAPAAAAAAADGLRFCDKCSIYQPEGAVHCNDCGVCIEGHDHHCPWMGKCLGRGNI 204
BLAST of mRNA_F-serratus_M_contig1004.145.1 vs. uniprot
Match: A0A835ZD98_9STRA (Palmitoyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD98_9STRA) HSP 1 Score: 58.5 bits (140), Expect = 2.020e-6 Identity = 51/156 (32.69%), Postives = 71/156 (45.51%), Query Frame = 3
Query: 477 DPFAFVCDIARRPKFGHQYILCPSRSRRHRGEPIGLSVGPHWSGVLYTISMIAVVTLFLTRVVLNDVAP----WCQPAGVVCALITTALLLATAVTDPGIVVQGAEGGEGEGSEYCEECSIWRPDXXXXXXXXXVCILGLDHHCLWMGKWTGQHTV 932
DP +C R PK GH Y+L + R + L++GPHW+GVL+ + VTL T ++ P W + V A +T L T +DPGIV Q A + C EC++ P XXXXX +WMGK G+ +
Sbjct: 1 DPCRCLCSWLRAPKIGHNYVLARTPGSL-RSSKLLLTMGPHWTGVLFA----SAVTLGATVALIIQDGPQGTNWFKWFCVSGAGLTLLTLWLTGCSDPGIVRQPANADMD--ARMCPECAMMVPGTAEHXXXXXXXXXXXXXXXIWMGKCIGKQNM 149
BLAST of mRNA_F-serratus_M_contig1004.145.1 vs. uniprot
Match: M4BFB6_HYAAE (Palmitoyltransferase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BFB6_HYAAE) HSP 1 Score: 59.3 bits (142), Expect = 2.900e-6 Identity = 61/202 (30.20%), Postives = 82/202 (40.59%), Query Frame = 3
Query: 441 LLAKPTPSEPITDPFAFVCDIARRPKFGHQYILCPSRSRRHRGEPIGLSVGPHWSGVLYTISMIAVVT-LFLTRVVLNDVAPWCQPAGVVCALITTAL-LLATAVTDPGIVV-------QGAEGGEGEGSE--------------------------------YCEECSIWRPDXXXXXXXXXVCILGLDHHCLWMGKWTGQ 923
+LA+P S +DP A +C + + GH YIL RS + L VGPHW GVL T+S++ + T +FL + V PW + TT L T+ TDPGIV + E E +E +C+ CSI + VCI G DHHC WM K G+
Sbjct: 17 VLAQPVNS---SDPLACLC-CCKFKRLGHGYILY-ERSDGDGMKTTLLVVGPHWIGVLVTLSIVLLCTGMFLFQCVAT--MPWYNTLMTLGLCGTTLYYLFQTSCTDPGIVQPLQHKKDESLTQDESEATELEAEHVAIKTIAMESSVVRYAHDRRLRPTRRRFCDICSIQQDCSTDHCEDCGVCIAGHDHHCPWMSKCIGR 211
BLAST of mRNA_F-serratus_M_contig1004.145.1 vs. uniprot
Match: A0A6G0X9B3_9STRA (Palmitoyltransferase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X9B3_9STRA) HSP 1 Score: 55.1 bits (131), Expect = 7.640e-5 Identity = 39/121 (32.23%), Postives = 52/121 (42.98%), Query Frame = 3
Query: 474 TDPFAFVCDIARRPKFGHQYILCPSRSRRHRGEPIGLSVGPHWSGVLYTISMIAVVTLFLTRVVLNDVAPWCQPAGVVCALITTALLLATAVTDPGIVVQGA---EGGEGEGSEYCEECSI 827
TDP C R K G Y+L H P + VGPHW GVL T+++I V T F ++ W + T L T TDPGIV +G+ + S YC+ C +
Sbjct: 50 TDPCRCFCCFGFR-KIGQNYVL-------HESNPF-IIVGPHWIGVLITLTLIVVSTYFFIDQQCRELEAWYTLLSLALCFATIFFLFKTTCTDPGIVPRGSLHTDPALVSMSSYCDICDV 161
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 214.9 |
Seed ortholog evalue | 5e-53 |
Seed eggNOG ortholog | 2880.D7FH15 |
KEGG ko | ko:K16675,ko:K18932 |
KEGG Pathway | ko04391,map04391 |
Hectar predicted targeting category | other localisation |
EggNOG free text desc. | protein-cysteine S-palmitoyltransferase activity |
EggNOG OGs | COG5273@1,KOG1311@2759 |
Ec32 ortholog description | Zinc finger, DHHC-type, palmitoyltransferase |
Ec32 ortholog | Ec-26_003120.1 |
EC | 2.3.1.225 |
COG Functional cat. | Z |
Best tax level | Eukaryota |
Best eggNOG OG | NA|NA|NA |
BRITE | ko00000,ko00001,ko01000 |
Exons | 4 |
Model size | 1497 |
Cds size | 885 |
Stop | 1 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622928795.5938637-UTR-F-serratus_M_contig1004:219687..220144 | 1622928795.5938637-UTR-F-serratus_M_contig1004:219687..220144 | Fucus serratus male | UTR | F-serratus_M_contig1004 219688..220144 - |
1690962575.5433135-UTR-F-serratus_M_contig1004:219687..220144 | 1690962575.5433135-UTR-F-serratus_M_contig1004:219687..220144 | Fucus serratus male | UTR | F-serratus_M_contig1004 219688..220144 - |
1622928795.6827667-UTR-F-serratus_M_contig1004:222593..222612 | 1622928795.6827667-UTR-F-serratus_M_contig1004:222593..222612 | Fucus serratus male | UTR | F-serratus_M_contig1004 222594..222612 - |
1690962575.5852365-UTR-F-serratus_M_contig1004:222593..222612 | 1690962575.5852365-UTR-F-serratus_M_contig1004:222593..222612 | Fucus serratus male | UTR | F-serratus_M_contig1004 222594..222612 - |
1622928795.709098-UTR-F-serratus_M_contig1004:230547..230683 | 1622928795.709098-UTR-F-serratus_M_contig1004:230547..230683 | Fucus serratus male | UTR | F-serratus_M_contig1004 230548..230683 - |
1690962575.5953147-UTR-F-serratus_M_contig1004:230547..230683 | 1690962575.5953147-UTR-F-serratus_M_contig1004:230547..230683 | Fucus serratus male | UTR | F-serratus_M_contig1004 230548..230683 - |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622928795.631941-CDS-F-serratus_M_contig1004:220144..220271 | 1622928795.631941-CDS-F-serratus_M_contig1004:220144..220271 | Fucus serratus male | CDS | F-serratus_M_contig1004 220145..220271 - |
1690962575.557334-CDS-F-serratus_M_contig1004:220144..220271 | 1690962575.557334-CDS-F-serratus_M_contig1004:220144..220271 | Fucus serratus male | CDS | F-serratus_M_contig1004 220145..220271 - |
1622928795.647299-CDS-F-serratus_M_contig1004:220923..220974 | 1622928795.647299-CDS-F-serratus_M_contig1004:220923..220974 | Fucus serratus male | CDS | F-serratus_M_contig1004 220924..220974 - |
1690962575.5668464-CDS-F-serratus_M_contig1004:220923..220974 | 1690962575.5668464-CDS-F-serratus_M_contig1004:220923..220974 | Fucus serratus male | CDS | F-serratus_M_contig1004 220924..220974 - |
1622928795.6623726-CDS-F-serratus_M_contig1004:221886..222593 | 1622928795.6623726-CDS-F-serratus_M_contig1004:221886..222593 | Fucus serratus male | CDS | F-serratus_M_contig1004 221887..222593 - |
1690962575.5768378-CDS-F-serratus_M_contig1004:221886..222593 | 1690962575.5768378-CDS-F-serratus_M_contig1004:221886..222593 | Fucus serratus male | CDS | F-serratus_M_contig1004 221887..222593 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1004.145.1 >prot_F-serratus_M_contig1004.145.1 ID=prot_F-serratus_M_contig1004.145.1|Name=mRNA_F-serratus_M_contig1004.145.1|organism=Fucus serratus male|type=polypeptide|length=295bp
MSPPHDKGALAMLPLLAPHEQQSSKGSNAAGYKGKNKGIIFRERRIQQQQ EEEEEQERTEATTPFFDSEDGSSIVEGLSSRDRHHRQVARSTKRLLLAKP TPSEPITDPFAFVCDIARRPKFGHQYILCPSRSRRHRGEPIGLSVGPHWS GVLYTISMIAVVTLFLTRVVLNDVAPWCQPAGVVCALITTALLLATAVTD PGIVVQGAEGGEGEGSEYCEECSIWRPDGAEHCDECGVCILGLDHHCLWM GKWTGQHTVVQAVQRIVDPVSVVLDGGVALSEYPLGGTLERFGF* back to topmRNA from alignment at F-serratus_M_contig1004:219688..230683- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_F-serratus_M_contig1004.145.1 ID=mRNA_F-serratus_M_contig1004.145.1|Name=mRNA_F-serratus_M_contig1004.145.1|organism=Fucus serratus male|type=mRNA|length=10996bp|location=Sequence derived from alignment at F-serratus_M_contig1004:219688..230683- (Fucus serratus male) ATCGATCCATCGATTGACTGTGGTTCCGTATGTACAGGTATCTCTTATAA
AAGGACAAAGCTGAAACGCAGGAGCACATTGGAAGGAGAGATCAAGACTA
TCGCTAGATCGCTAGGTATATACCATCTGTGGGAAGGTGAGGGTATTCTC
TATCGATTAAAATGTTGTGTGAAACTCGCTGCTTCGACTCGCTTTCAAAA
CGGGCACTCAATCGAGAGGCGTTTTGTCTGATGGTTAGTTGCTACACGGC
AGACTGAGAGATAGAGAGAAAAATCTGAACCAATTCAAACCTCTTATTTC
GAGCATCTACACCGGGAATGGTACCAAATGCATGCCGATCACTTTCAGCA
GAGTATGGATCAACCGGGCATTGTTGCCAATCCTGCTCGTGGTCAGCTGA
AAAGGAAAAAGTTTTTCCTCCTGTCCCCGTTCGCGCTTGAGAATTTGGTC
TCGCGAGACGGGATCGGCCGTCCCGTCCCGCGTCGGCCCGCTCATTCTCC
CTACTCAGGCAGAATCTGGAGCTTACCCACGGGATTCCTCCCGCTTTCCG
CGTTGGCGTCCAATTACATCGTCAACCGCCAGCGGGTCAGTCCCGAGTTA
GTCGGGTTACGCAGTCGTGTACCGATGGCGCGTTCTCTGCCGAGAGTCCG
CCGGCACAGGGCCATCAGTCCTCAAGGTCCGGCTGCTGCCTTTCCAGGTG
TCACTGACCAACTGACCAACTACGTGCGCCTTTCTTTTCCAACTCCCACT
AATGTTATGTACAGAGTAGTCGATATTTATGATACAGAAAGCATCAGAAG
AGGTTACTGTAACACGACTCGATCAACGATGCTGTAAACATGAACAACAG
TAGAGTGGAGTGGAGTACTGTACCAGGTACACGGTAATCAGTGTTACTGC
ACACCAGATAAACTGCTGCTGCTGCAGAGCGATTCGTGGAAGAAATTAAA
TTTGCACTTTCAACGCGTTGTCCTGTCTTGTACAGTCAGTTATAATATTC
CCGTAATTACAATTACAGCAGGCTGGCTCTATAGTACGCTTGTCGTCTCC
AAGGGGGACGAAGAGGCCTTCCTCTCCCAAAATCAACATTGCGAGAAAAT
CCCCGCGAGGTACTCGAATAACCACTCGAAAACGAGAAAAACCTGTAGTA
CCCAATCCGCGTCACGCCGATATCGTTGGGATACGAACCCTAGCCTCTAT
TTTAATAACTGCCTCCTGTCTGGAGTACCGCCGGCATCTCAGAATCTGAA
AAACACTATTTAGGTAGCCTGATGAGCTCACGTGGTACGTGAAAACCAAT
CACGCTCACGCTATGCAGTACTTGAAGAGAGCTTATACAGTACAGTACAG
TACAGACAGTATTATTATTAATAGTTGCACAACCGACGTTGCTCCATCAG
TCCTTACGCCCAGTACAGCAGTATTATTATTAGTACAAGATAGTACTCGT
ATTCTGGTATACCATTTCATACTACCAGTATAAGATAGGGTAGCTATCGC
TATACGCTCGCTAAAGGATAGTTTGGTAATTATCGTCAGCTGTACACAGG
TGTTGGTTTTTAATCAAACAGGGCAAGTAATTTGAAGTTCCACGTTCCTT
GTTCCCTGCCCTTTTTTTTCATCTAAAACCCGCCCTGAACACAGGTGTTG
GTTTAACCAAACAGGGGGGGCACATCACGAAGAGGAACATATTTTGATAC
ACCCGAGCTCAAATTGATACAGCACACAGATTAGAAGCTCGCTAAACGCT
CGCAATTACTATATAACAGTACCTCGCTGTAGCTATCTCACCAGCAAGCC
CCAGGGCTTGGCTAGTCTTTGGATCTTCCGGCCTCGGCAGCCTAGCCTCA
CAAAGCATTTCTATTAATAGTTTCAAACCTCTGCCCAGACGCTTCGTGGG
TTGACCATTATCATTACAGGGAAACATAACATTCAACCGTTCGGACTAAT
ATGTAGAGAAACAGACGCAAACATGGAGTATTTTGTATATACCTGGTATA
GAGCCATGTCCACGAAAGGCGTTTTTTTTTTTTTTCATGAACACATCTAG
ACCTTCTGAGCACCCCCCAGCAGCAGAGGAAGAAAATGTCAAAACGTTTA
GTTGGGATCAGTTGTTTGACTTAACTTCCTCTCCAGGCCACTTGACGTGT
TACGATACAGTATAAATATTAATAGTACACCACGCTATACTGGCAGTGCG
TTTTTTTTGAGTACATGAAGCATGTCTAACATGTGTGTTGTGTTTTCTTC
CCATTGTTCATTGGACGTCACAGTCCCTGTAATTTTTGTCATGTTCTAAC
ATAAGTTAATCGACTAAAATTTTTAGTAAGAAACTAGAGTAGTAATATTA
ATAATTAGTAGGGATGCCTCGTCCAGCGTGCTGTTTGCGGTACTATCAAC
GTCATCACTTGTTTAAAGAAAAATCTGAACTAACGCATCTCGACCTTCTG
AGCACCCCCGAGTCGGGGGGGAAAATGTAAAAACGTTTAGGTGGGATCAT
AAGGTGCAAAGACAAAATCTCTTCATGGCATTGAAACGGGTTCCCCGATG
GTATTATAGTAACATTAGGTCAACAGTATAATGTCGGGGAGAAGCCCACT
GCTGTTATACTTGTACACTTCCATTAATCGCCATGCAGAGGCACCAAGAG
GTTTTGTCTTTGCAGCCTATGAATCCCAGTTAAGTGTTTTGACATTTTCT
CCTGGACTGGGGGGATGCTCAGAAGGCCTACTTGTAGACGCGTTCATGTT
TTTCTTTAAACACACAAAAACGTTATACGTACAACGATTACTCTCTTCTC
TCGTCTTAGTCCTCCAGCAGTACAATATTAATAGTGGTATTAGTACTGCC
GGTACTTCAACATGCTATAACCACTTCATACTATTACAAGTACTTGTCGT
AGTAGGTGTGGGAAAAAGAGGCGTATATTAATTGGTCCATAGTGACCTGC
CAGGCAGCACTCGCTCGGAACTACCTTGAGGTCTACTGGCCCTGTGCCGG
CGGACTCTCGGCAGTGAACGCCATCTTTACGCAATTGCGTGACCACATAA
ACTCGGGACGGACCTGATTGCGTATGACGGTTTTAAATAAATAAATGGAC
GCCGCTGCGGAACTCGGGAGGAATCCCGTGAGTAAGCACCAGATTCAGCC
TGAGTATGGAGATGAGCAGGCTGACGCGGGACGGGACTGCCGAACCCGTT
TCGCGAGACCAAATTATAAGGCGCGAACGAGGACAGAGAAATATTCATTT
TCCCTGTTGAGCTGACCGCGAGCAGGATCGGCAACCTTACCCGGTTGATC
CATACTATTGCTATATTGTGACCATATACACATCATTTACATACTTGCAA
GCTCCTTCATTTGGTGCTCTCTCGGTCGTTGAAGGAAAAATCTGAACTCA
TGTAGACCTTCTGAGCATCCCCCAGTCAGGGGGGAAATAGTCAATAGGTT
TATTTAGGTTGGATCATATCATGAGGCTGCAAAGACAAAAGAGTCCCGCG
ATGGTATTAATATTTAATATTTATTAGTAACATTGGGTCAACAGTATCAT
GTCGGGGATGTTTTCTGTGGCACAGTAGTTCATCTTCCAAAATCCATTAC
AAAGCTCCGCAGTGACGCCATCAATTGCCGACTCTGACGGCAATCTATGC
ATATCTCCGTCTACGTATGTTTGTAGGTTCTTCTCGCTGTGGTTCGGGCT
GGTGCGATTGCTAGTCCGAAAGCATCTAATAAAGCTTCTGAGCATCCCCC
AGACAGAGAGGGGAAGAAATGGTTGACCCCGAAATTGTTTAAAGAAAAAT
GAGAAAATTTTCTCAATCTCTACGTCATCTACGGGCGAAATTTTGCTGTT
AATTGTGTAAAGAAAAATCTGGACGCATCTAGACTATACTATTATACTAT
ACTATACTATACTATACTATACTATACCCCAGTCAGGGGGGAAAATGTCA
AAACGTTTACCAGGTAGGTGGGATCATATCATAGGCTGCAAATACAACAC
CTTTTCATGGCATTTAAACGGGTTCCCCGATGGTCGTAGCATTTAGGTCA
ACATGTAGTATAATACCGGGTAGAAACCCACCGTTATGCTGTTGTACACT
TACTTTGTTATGCTGTTAATTTGTTCGAGGAGTAGAGTAGCCTACCGGAA
AAGAACGTAAAATGACCAAAAACGGATGGAAGCTGAGCAAAGTAGCTATA
ATCGGGAGTACCCGGTCGCTTTTGGCCTAAAACAGGAGAAAGTGGGTGTT
GGCCAATCAGATACGGCCAACAACACTCTCCGCCGCTATTGTTTTCAGGT
ACACCCGTTTTTGGCCAAAAAAGCACCGGGAGCTCCCGTTTTTGGCCATT
GTCAACATTATAATGCCGGGTAGAAACCCACCGTTATGCTGTTGTACACT
TTCTTTGCTATGCTGTTAATTTGTTCGAGTAGTAGAGGAGCCCACCGGAA
AAGAACGTAAAATGACCAAAAACGGATGGAAGCTTAGCAAAGTAGCTATA
ATCGGGAGTACCCGGTCGCTATTGGCCAAAAACAGGAGAAAGTGGGTGTT
GGCCAATCAGATACGGCCAACAACACTCTCCGCCGCTATTGTTTTCAGGT
ACATCCGTTTTTGGCCAAAAAAGCACCGGGAGCTCCCGTTTTTGGCCATT
GTCAACAGTATAATACCGGGTAGAAACCCACCGTTATGCTGTTGTACACT
TACTTTGTTATGCTGTTAATTTGTTCGAGTAGTAGAGTAGCCCACCGGAA
AAGAACGTAAAATGACCAAAAACGGATGGAAGCTTAGTAAAGTAGCTATA
ATCGGGAGTACCCGGTCGCTATTGGCCAAAAACAGGAGAAAGTGGGTGTT
GGCCAATCAGATACGGCCAACACTCTCCGCCGCTATTGTTTTCAGGTACA
TCCGTTTTTGGCCAAAAAAACACCGGGAGCTCCCGTTTTTGGCCATTGCC
CTTTTGTATTTGCAGCCTATGAAACGGCACCACCCCCACAGATAGGGATA
GTTTTATAAGGACCGGCCAATCACAGACCTCCCTGGCATGGAAATACTGT
CAGATTTGTCCAATGAAAGACGATTTTTGTAGAGATTTTAAAAGGATTAT
TGGTGGACGCGTGCATTTCACACAGTCCCATGAGATTGATCGTCGATAGC
ACCCACCTTCTTCTGTAGATTACTCGCTTACAGGTCTACCATCGGTGGAG
CCCTTTTACTTGAAAATATATAGGCAGCTCACACACACGAACGCGCCGGC
GGCAGCATCGATGAACCATGCTAGTGTGGCGGTACATCCCCACTATAGTG
TGTGGTTGGTTGCGTTTCTTGGAGCCTGTGGCCTGTCGTTGAGGTCACGC
CAGTATTTTCTCAGCATGTACCCACGGCGGCGGTGATTGTACCTAAACAG
CCAAGCCAAATCATTCATAGTTCAAGGGAGGCAAAAATGTTTCGTCGGCG
ATTCCGCATTCCATACATCTCTCCGTGGAGCTCCTCTCCTTGTTGGCGAC
ACAGCAGAAGAAGTGGTATCACCATCTGCAAGTCAAGTACAGAGCTTGAG
GACACATTACTATTAATATAATAATACATACCATCGTGCACTGTTCTGTA
TATACCTATGTAGTCTACAGCAGTTGGTACTATTAATACATTATTTTATC
TAATTTTTGTACTGTGCGTGATGTACAAAAACTGTTTTGTTAGAGTTACG
TAGCGAATTCTTGCCGGACTGTGCTCGTGTTTGAAGAAAAAACAGAACGT
ACCTAGACCTTCTGAGCATCCCCCAGTCAGGGGGGGGAAATGTGTTCATC
TACCGACAATGACGAGGGTAAAACCTCCACACACATACGTCGGTGTGTGA
GTTTGTAACACCCCAATATGTCAATATGTCCTTCTCTCTCTCTTTTTTAC
AAGAAAAGGCTTCTTCAACATTTTTACGCGCTTCGCGCGAATAATATAAT
TATTTATAAAAACCTCCTTATGTATGGAATCGGAGCCTATGAAACAACAA
TTTTAAACACGTCGTGGAAAGTCCCTACGGACTTGTCGTTGAACGTAAAT
GTATTTTTCTTACTCCAATTACAATATTGTAACGTTTCTTCTGTTCTATT
AACCCTTCTGGCCCTACACGTGCGTTTACTGATCATTGCACTGATCATTT
TTTTTGTTTTTGTTTTTGTTTAGCCCAGTCTATTCGTGTAAGGGATTTAA
AACAAAATACCCGAACTCCACATGCAAGGAGTTGTATTGCACCACAGAGC
AACGCTGTGCCTGCAAAGAGGGACAACAAAAGACACTCAAATGAGGAATA
TATAAAAAAGGGAAGTCATTTCATTAGCACGTCCATTGCCTGGGCCGGCA
CCCCACATCCATACTTGGGACAAAACCTTTGAACCCATATGCATGCTCAA
AAGTTGCTGTCTCGATATCATGAAAAACAACTCCTATATAATATCAGGAG
CAAAACGAACGAATCACACGTCCTCCGAACCTCAGCGTACTGTACACACG
AATTACAGCAACCGCGCCGTTCTACAGCACACAAGCAATGGTGGAGCCCA
CATCTGCGAGCCAGAACAACCCGTACAAGCTATAGTCTATATCCTATCTT
GCCACTGTATACAACTGCGATGTACCTAGTATGCGGAGTATACTCTTTTA
GGGAGAATGCCTGGACCCACAGAGGAGGCCAATCCATGTTCGTTTGTGTA
TAAAGAAAAACCAAATAGCGCCTATACCTTCTGTTAATAGCTTCCTCCAG
TCAGGAGAAAAATTGTCAAAACGTTTAGGTGGGATCAAAGGCTGCAAATA
CAAAAAAAAAACTAGAACGTGCCTATACCTTGTGAGCATCCCCCAGTCAG
GGGGAAAAAAATATCTCATGGGCTATTGTTGTGCTAAATATTGTAAAATA
AGGAGCGCTAGTGAGTCCGAAGGGATCACTTTGGGCGGGGCCAGAGAAGT
ACAGAAGTACAGTTTGCTAGTCTGGCCCTTCAAAGCGCGCTCACTGATCA
TTTGAACCCTCTCCACTGGTCATTTGAGAATATGTTGAAAATAGAGTTTT
AGCATGCATGGAACATCTAGGGATAAACGCATAACAACCTCTGTCTGCGA
CAGCACGACCACTCCACAACCACTCCACAACCCTTCTTGTACCCTGAGAG
ACGTCACCAGCTTGTCGCGGGCCGCCTACACGCCCCGTGGGTCGAGATCG
TAAAGCTACCGTTAGCAAAAAGTAGTACATTTTTGTTTTGCATTAAGTCC
GTAGGGACTTTTGGCCGTTCTATTTCATATCTATTCGGTGTGTTTGTATT
TCCCACTGTTTATAAGTGTTACATTTTTTATAGGACAGCAGGAGGAGCAA
GGTATAGGACAGTTGTGATAAATACATAGACTAATAGCGGTATGGGTTAA
GGATTGAAACAGCATAGGGACATACAAGACCACCATCGTAGATATCTTGA
ACATGACATAATCCAGAAAGTACGAGACACCGGATTTCATCTGAAAGTAG
ACGGAGCACCGAAGAGCAGTCACTAGTGGGAGATCGCACAAGGAAGTAAA
AGGCAAGCAAGTGGGTATGGTCCCCACGTGTGCGGTGTCAGGGCTACGGC
TCCCAGATACTCCTCATGCAGTAAAAAACCCACGGTCCACGCGTTTAGAC
CGGAAACTCAGAAGATACGGAGAAATATCTGGTGACCAACGAATGACAAG
CATGTTCTGTGCCTCAAACAGATCCATCCATAAATTCCTAAAAAGTCCTC
AAGAAAGCTTCAGCTTCGAAGAAGCCACTCCATAAAACTTGATCCAGAAA
AATAGACATCAGTTGTTGTTGGATGTGTCAAGTTAAACCCCTTTGACTGC
AATTGGTCATGCTCCGAGGAATGATCGGAATGATTGGAATGATCGCCGGT
CGCCAAGCCTCGAAGAAAGAACGCCAAGGCCTGGCGACCCACGCTCCCCA
GATCATTTCAGGCGCTATTCAGCACCATCTCCAGAAGCCTCAAAAGTGTT
CAATACTAATGTTTCTGCTTTTTATCCCCGACCCCGTGTTTTGAAAAAAA
CCTCTCGGTACAAAATAACAGGATCTCGGCGTGCGCGGGCATGTCGCCGC
CACACGACAAAGGCGCGCTCGCCATGTTACCTCTCTTGGCCCCCCACGAA
CAACAAAGCAGTAAAGGCAGCAACGCCGCTGGTTACAAGGGTAAGAACAA
GGGGATTATTTTCCGAGAGAGAAGGATTCAGCAGCAGCAGGAGGAGGAGG
AGGAGCAGGAGCGCACCGAAGCCACCACGCCTTTTTTTGACTCGGAGGAC
GGGTCGTCAATCGTGGAAGGCCTCAGCTCCAGAGATCGGCATCACCGCCA
AGTAGCCAGATCAACGAAGAGGTTGCTTCTGGCCAAGCCGACACCCTCTG
AGCCCATCACAGATCCGTTCGCCTTCGTCTGCGACATCGCCCGCCGACCG
AAGTTCGGGCATCAGTACATCCTCTGCCCGAGCCGGTCGCGACGGCACCG
GGGAGAGCCGATCGGCCTCAGCGTGGGGCCCCACTGGTCGGGCGTCCTTT
ACACGATCAGCATGATTGCGGTGGTGACGCTGTTCTTGACGAGGGTTGTG
CTGAACGACGTGGCGCCCTGGTGCCAGCCGGCGGGCGTGGTCTGCGCTCT
CATCACCACGGCCTTGCTGCTGGCGACCGCCGTGACGGATCCTGGGATAG
TGGTCCAGGGCGCGGAGGGGGGGGAAGGCGAGGGATCGGAGTACTGCGAG
GAGTGCTCGATCTGGAGGCCGGACGGCGCGGAGCACTGTGATGAATGGTG
AGTACGAGACCGCCCGAGAGGAGCACGGAACGCGATTTGGTGTGGGGTTG
AAGTGTAGAGCGTACGAGTTTTGCGGCTCTTGTGATCCTAACCCCATCTG
GGTGCAGTACAGTATTAATAAATGATACCTCGCATCGCGCTCGCGTACTG
ATATTAATATTAATAGCTTTCCAAGATTGTAACTGTAACTGATGACAGTA
GAGTAGAGTAAAGCAACAACCAACAACCTTCGCTCTTCTTGGCACCGGAC
TGCAGCATGCCGATAGTTTCTTATCCTTTCACAACGGTCCTACCTTTTTT
TACCCCCCTTGCCATTGTTCCCTTGTTGTTCTTTAGTTGATATAATGTTA
ATATTTAATATAATAGTCAAAATTACCACAGGGAGGAGGAGGTAACGTGA
CTGGTGTTTTTAGACTATAACCGTGTGACAAATATACGACGCAAACATTG
CTGGGGTGTTTTGAAGTCATTTTGAAGTCATTTAGAAGTGAAGTGATCAT
AATCACCATTCTTGTTCTCTTCCAGGTCGAATAGAATCGAATCGAATCGA
ACCGAATCGTCTTTTGCTGTTGCTCCCGGGGGGCTAGGCTCTTCTCAAAT
GTGTGTTGTCATATTTCGGATTTGTTCGTGCGGAGCTGGTGCGCCTGACC
GTCAAAATTTCGCGTAGAAGTTGGGGTTTCCGAGGCTTCTGTCCGCACAT
CGCGTGGAATCGTAGCCTGCGTTTGGGGCAGTTCCTTAGCCGCCGAGGAA
ACCGCGTGTCAGGCAGTATATCTAGCTCTGTAACCGTGCGCAGTGTCGCT
CCTCGAGCTGAGATATATAATAGTGTTGATACCACTCGCCCTTGTCGTTC
TTTCGCCCTACCCCTGTTCCTGCTGCTGTATTGTGTATTACCTTATGTAT
TGTCTAAAGTGGGGTTTGCATACTCGGGTTGGATCATCACTGTCTCTGGA
TGGGCAAGTGGTGAGTGGACCGTTGAGGCCATAATTTATTACGTGTATCT
TATTACTGTATCTATTTCTGTATTTATTACTGTCTATTCCTGTATTTATT
ACTGTCTATTCCTGTATCTATTTCTGTGTCTATTACTGTATCTAATACTG
TATCTATTATTACTGTAGTTATTTCTGTATTTATCACTGCATCTAATACT
GTATCTATTACTCTAGTTATTTCTGTATTTATTACTGTGTCTAGACTATA
CCTGTAACTATTTCTCTATCTATTATAGTACCTATCAGTGTTTATATTAC
TGTATATATTATTGTATCAATTTCTGTATCTACTCTGTTATTATAGGTGT
CTCTGGCCGACGAGGCAAACGGCTCCGTGTGTAACGCGAACGTAGATAGA
AGCGAATCAAGTAAGGCTACTGTAACCCGTATTCGCTTGCCGAAAGTTCA
AGTGACGAGAATGATCTTGTTGGTTGTGAGCTCTCAGCGACGGCCTCACA
CCCGCCTCCCCCTCCCCTCCCCACCCTTAGAACTATATATGTCCTGTCAT
GTCCTGTCCTTTCCTTTCCTGTCTTTAGAGGTGTATGTATATGCATCACA
CGAGGCCTGAAAACGAAAGGTATCCTCCCTCTGTGCGTCTCTGCTGCCGG
TGCACAGCGTAGGACGGGGCAACATACTGTGGTTCAGGCTGTTCAACGGA
TCGTGGATCCTGTTTCTGTCGTTCTTGATGGTGGCGTCGCCTTATCTGAA
TACCCGCTAGGAGGGACGCTTGAACGCTTTGGTTTCTAGACTTAATTTTT
CTGTCAATCCTGGAAGAACTGTTGAACGCTTTATTAATACAATAGGTTGT
TTGGGTCATGGCATCTTCCTATGAAATCGTTCTGAAGACATCGAAGACGC
CTGGGTGCTCCAACAGCATAGCCGCTTCTTCTTCTGTGGGCGCTGGTTCG
AGGGCTCACGAACTGATCGCCGGCGCGACTGAAATGTGATGCGCTCTCGC
GATCAATACATGTACCTCCTTTAGCTATCATGTCGTTTTGTTCGGGCGGT
GAGCGAGTACACCGTCATCTTGGAACAATGTACATCGTCGCATATGGTTG
CAGTGCGTCTCTTACGCGTTAACGCCGGAATTCAATACGAAACCCCCGGA
CTTTCCCCTGGACGTCCTTTCCGTTGACATTTTTACGGTGCGGTCCCTTG
ATAATTGGCTCTCATCGGCACCGTACAAAATACCTGATACTGTAAC back to topCoding sequence (CDS) from alignment at F-serratus_M_contig1004:219688..230683- >mRNA_F-serratus_M_contig1004.145.1 ID=mRNA_F-serratus_M_contig1004.145.1|Name=mRNA_F-serratus_M_contig1004.145.1|organism=Fucus serratus male|type=CDS|length=1770bp|location=Sequence derived from alignment at F-serratus_M_contig1004:219688..230683- (Fucus serratus male) ATGTCGCCGCCACACGACAAAGGCGCGCTCGCCATGTTACCTCTCTTGGC CCCCCACGAACAACAAAGCAGTAAAGGCAGCAACGCCGCTGGTTACAAGG GTAAGAACAAGGGGATTATTTTCCGAGAGAGAAGGATTCAGCAGCAGCAG GAGGAGGAGGAGGAGCAGGAGCGCACCGAAGCCACCACGCCTTTTTTTGA CTCGGAGGACGGGTCGTCAATCGTGGAAGGCCTCAGCTCCAGAGATCGGC ATCACCGCCAAGTAGCCAGATCAACGAAGAGGTTGCTTCTGGCCAAGCCG ACACCCTCTGAGCCCATCACAGATCCGTTCGCCTTCGTCTGCGACATCGC CCGCCGACCGAAGTTCGGGCATCAGTACATCCTCTGCCCGAGCCGGTCGC GACGGCACCGGGGAGAGCCGATCGGCCTCAGCGTGGGGCCCCACTGGTCG GGCGTCCTTTACACGATCAGCATGATTGCGGTGGTGACGCTGTTCTTGAC GAGGGTTGTGCTGAACGACGTGGCGCCCTGGTGCCAGCCGGCGGGCGTGG TCTGCGCTCTCATCACCACGGCCTTGCTGCTGGCGACCGCCGTGACGGAT CCTGGGATAGTGGTCCAGGGCGCGGAGGGGGGGGAAGGCGAGGGATCGGA GTACTGCGAGGAGTGCTCGATCTGGAGGCCGGACGGCGCGGAGCACTGTG ATGAATGATGTCGCCGCCACACGACAAAGGCGCGCTCGCCATGTTACCTC TCTTGGCCCCCCACGAACAACAAAGCAGTAAAGGCAGCAACGCCGCTGGT TACAAGGGTAAGAACAAGGGGATTATTTTCCGAGAGAGAAGGATTCAGCA GCAGCAGGAGGAGGAGGAGGAGCAGGAGCGCACCGAAGCCACCACGCCTT TTTTTGACTCGGAGGACGGGTCGTCAATCGTGGAAGGCCTCAGCTCCAGA GATCGGCATCACCGCCAAGTAGCCAGATCAACGAAGAGGTTGCTTCTGGC CAAGCCGACACCCTCTGAGCCCATCACAGATCCGTTCGCCTTCGTCTGCG ACATCGCCCGCCGACCGAAGTTCGGGCATCAGTACATCCTCTGCCCGAGC CGGTCGCGACGGCACCGGGGAGAGCCGATCGGCCTCAGCGTGGGGCCCCA CTGGTCGGGCGTCCTTTACACGATCAGCATGATTGCGGTGGTGACGCTGT TCTTGACGAGGGTTGTGCTGAACGACGTGGCGCCCTGGTGCCAGCCGGCG GGCGTGGTCTGCGCTCTCATCACCACGGCCTTGCTGCTGGCGACCGCCGT GACGGATCCTGGGATAGTGGTCCAGGGCGCGGAGGGGGGGGAAGGCGAGG GATCGGAGTACTGCGAGGAGTGCTCGATCTGGAGGCCGGACGGCGCGGAG CACTGTGATGAATGTGGGGTTTGCATACTCGGGTTGGATCATCACTGTCT CTGGATGGGCAAGTGTGGGGTTTGCATACTCGGGTTGGATCATCACTGTC TCTGGATGGGCAAGTGGACGGGGCAACATACTGTGGTTCAGGCTGTTCAA CGGATCGTGGATCCTGTTTCTGTCGTTCTTGATGGTGGCGTCGCCTTATC TGAATACCCGCTAGGAGGGACGCTTGAACGCTTTGGTTTCTAGGACGGGG CAACATACTGTGGTTCAGGCTGTTCAACGGATCGTGGATCCTGTTTCTGT CGTTCTTGATGGTGGCGTCGCCTTATCTGAATACCCGCTAGGAGGGACGC TTGAACGCTTTGGTTTCTAG back to top
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