|
Homology
BLAST of mRNA_F-serratus_M_contig1002.139.1 vs. uniprot
Match: A0A0M2Q2L6_PROHO (50S ribosomal protein L10 n=1 Tax=Prochlorothrix hollandica PCC 9006 = CALU 1027 TaxID=317619 RepID=A0A0M2Q2L6_PROHO) HSP 1 Score: 70.1 bits (170), Expect = 2.520e-10 Identity = 52/157 (33.12%), Postives = 82/157 (52.23%), Query Frame = 1
Query: 400 SRAGKAKAVEEVSDLLRKSSLVFATPVAYLSANEVVQLRLNI-PEGCTARVVKNKLMRIAAKDTD-FEEVCEMTTGGNFWIFVESEDNLAVPIKYIQDFAKRMDPKEKIGWDQPFRGGVFDKKLVDGPGVIAISKLPTKHELYQRIAVALNLIPTKI 864
S + K + V ++ L + L A LS +E+ QLR ++ P G + +V KN LMRIA +D + ++ + + G N ++ ++ D+L IK Q F K K I RGG + + + A+++LPTK ELY RIA + IPTK+
Sbjct: 4 SPSNKREIVADLKAQLDQCLLAIVVDYAGLSVSEITQLRDSLYPLGASCKVTKNTLMRIAIEDNETWKPMQQFLNGTNAFLLIQ--DDLPGAIKAYQAFQKAT-KKTAI------RGGAMEGTALSDQQIAALTELPTKEELYARIAGGIKAIPTKL 151
BLAST of mRNA_F-serratus_M_contig1002.139.1 vs. uniprot
Match: A0A348UTG2_9DELT (50S ribosomal protein L10 n=8 Tax=Desulfobacter TaxID=2289 RepID=A0A348UTG2_9DELT) HSP 1 Score: 69.7 bits (169), Expect = 2.580e-10 Identity = 48/150 (32.00%), Postives = 75/150 (50.00%), Query Frame = 1
Query: 412 KAKAVEEVSDLLRKSSLVFATPVAYLSANEVVQLRLNIPE-GCTARVVKNKLMRIAAKDTDFEEVCEMTTGGNFWIFVESEDNLAVPIKYIQDFAKRMDPKEKIGWDQPFRGGVFDKKLVDGPGVIAISKLPTKHELYQRIAVALNLIPT 858
K + VE ++ L + + F L+ ++V +LR + E G VVKN LMR+AAK T E + ++ G N I S+D+ P K I +F K EK+ +GG K + V ++K+P+K EL ++ LN +PT
Sbjct: 7 KKELVENLAKELGDAEISFLVDYKGLTVSQVTELRAKLREVGAQMAVVKNTLMRLAAKGTGSEVLIDLFKGPNAIIL--SKDDPVAPAKVISEFLKT---NEKV----QLKGGALGGKFLSPEDVTQLAKMPSKEELLAKLVYTLNAVPT 147
BLAST of mRNA_F-serratus_M_contig1002.139.1 vs. uniprot
Match: A0A521G4R1_9DELT (50S ribosomal protein L10 n=1 Tax=Candidatus Electronema sp. GS TaxID=2005002 RepID=A0A521G4R1_9DELT) HSP 1 Score: 69.7 bits (169), Expect = 2.630e-10 Identity = 47/158 (29.75%), Postives = 77/158 (48.73%), Query Frame = 1
Query: 403 RAGKAKAVEEVSDLLRKSSLVFATPVAYLSANEVVQLRLNIPE-GCTARVVKNKLMRIAAKDTDFEEVCEMTTGGNFWIFVESEDNLAVPIKYIQDFAKRMDPKEKIGWDQPFRGGVFDKKLVDGPGVIAISKLPTKHELYQRIAVALNLIPTKIGRS 873
R K V E+ D ++ L E+ +LR+++ E ++ KN L+RIAAKDT++E + + TG F E P K + +F K + R +F+ K + G +IA+SKLP+KH+L ++ L +PTK+ R+
Sbjct: 3 RESKVLKVNELKDTFTRAKFAAVADYQGLKVTELEKLRISLREQNAQLQIAKNTLLRIAAKDTEYEGLQQDFTGTTVVAFGFEEP--VGPAKALAEFNKEFAKLQ-------LRAAMFEGKRMSGEQIIALSKLPSKHQLLGQLCGVLAAVPTKLVRT 151
BLAST of mRNA_F-serratus_M_contig1002.139.1 vs. uniprot
Match: A0A1W1XXF6_9DELT (50S ribosomal protein L10 n=1 Tax=Desulfacinum hydrothermale DSM 13146 TaxID=1121390 RepID=A0A1W1XXF6_9DELT) HSP 1 Score: 68.9 bits (167), Expect = 4.760e-10 Identity = 53/157 (33.76%), Postives = 81/157 (51.59%), Query Frame = 1
Query: 403 RAGKAKAVEEVSDLLRKSSLVFATPVAYLSANEVVQLRLNIPE-GCTARVVKNKLMRIAAKDTDFEEVCEMTTGGNFWIFVESEDNLAVPIKYIQDFAKRMDPKEKIGWDQPFRGGVFDKKLVDGPGVIAISKLPTKHELYQRIAVALNLIPTKIGR 870
+A K + V E+ + L+++S T L+ E+ LR N+ E G RVVKN LMRIAAK T E V + TG N + + ED A+ K +++FAK D + +GGV + V A+++LP++ E+ LN +PT + R
Sbjct: 3 KAKKEQLVAELHEKLQRASAAVLTDFKGLTVAEITALRDNLAEQGVEYRVVKNTLMRIAAKGTTAEVVEPLLTGTNA-VAISYEDPSALA-KALKNFAKETDKFQ-------IKGGVLGSNPLSPQDVEALAELPSREEMLATFLGTLNAVPTGLVR 150
BLAST of mRNA_F-serratus_M_contig1002.139.1 vs. uniprot
Match: B4WIK4_SYNS7 (50S ribosomal protein L10 n=2 Tax=Cyanobacteria TaxID=1117 RepID=B4WIK4_SYNS7) HSP 1 Score: 68.6 bits (166), Expect = 6.340e-10 Identity = 50/153 (32.68%), Postives = 71/153 (46.41%), Query Frame = 1
Query: 406 AGKAKAVEEVSDLLRKSSLVFATPVAYLSANEVVQLRLNIPE-GCTARVVKNKLMRIAAKDTDFEEVCEMTTGGNFWIFVESEDNLAVPIKYIQDFAKRMDPKEKIGWDQPFRGGVFDKKLVDGPGVIAISKLPTKHELYQRIAVALNLIPTK 861
A K V E+ DLL S F LS ++ LR + E G T ++ KN L++ A D D + E G + + ED + +K + F K E RGGV + KL+ A++ LPTK ELY +IAV +N + TK
Sbjct: 6 ANKQALVAEMKDLLEASESAFVIDYKGLSVAQISDLRGRLRESGATCKISKNTLLKRAIADQDQWQELESLLTGTSAVLLTKED-IGSAVKAYKKFQKDTKKTE-------LRGGVLEGKLLSQKDAEALADLPTKDELYAKIAVGINAVATK 150
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Taxonomic scope | Eukaryota |
Seed ortholog score | 104.4 |
Seed ortholog evalue | 8.7e-20 |
Seed eggNOG ortholog | 2850.Phatr14715 |
KEGG ko | ko:K02864 |
KEGG Pathway | ko03010,map03010 |
KEGG Module | M00178,M00179 |
Hectar predicted targeting category | chloroplast |
GOs | GO:0003674,GO:0003735,GO:0005198,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005840,GO:0006412,GO:0006518,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009941,GO:0009987,GO:0010467,GO:0015934,GO:0019538,GO:0022626,GO:0031967,GO:0031975,GO:0032991,GO:0034641,GO:0034645,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0071704,GO:1901564,GO:1901566,GO:1901576,GO:1990904 |
EggNOG free text desc. | Ribosomal protein L10 |
EggNOG OGs | 2S56U@2759,2XBWC@2836,COG0244@1 |
Ec32 ortholog description | 50S ribosomal protein L10 |
Ec32 ortholog | Ec-12_005900.1 |
COG Functional cat. | J |
Best tax level | Bacillariophyta |
Best eggNOG OG | NA|NA|NA |
BRITE | br01610,ko00000,ko00001,ko00002,ko03011 |
Exons | 3 |
Model size | 1462 |
Cds size | 813 |
Stop | 1 |
Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622928794.7283108-UTR-F-serratus_M_contig1002:248373..248773 | 1622928794.7283108-UTR-F-serratus_M_contig1002:248373..248773 | Fucus serratus male | UTR | F-serratus_M_contig1002 248374..248773 - |
1690962575.214354-UTR-F-serratus_M_contig1002:248373..248773 | 1690962575.214354-UTR-F-serratus_M_contig1002:248373..248773 | Fucus serratus male | UTR | F-serratus_M_contig1002 248374..248773 - |
1622928794.8115082-UTR-F-serratus_M_contig1002:261958..262207 | 1622928794.8115082-UTR-F-serratus_M_contig1002:261958..262207 | Fucus serratus male | UTR | F-serratus_M_contig1002 261959..262207 - |
1690962575.2704637-UTR-F-serratus_M_contig1002:261958..262207 | 1690962575.2704637-UTR-F-serratus_M_contig1002:261958..262207 | Fucus serratus male | UTR | F-serratus_M_contig1002 261959..262207 - |
The following CDS feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type | Position |
1622928794.7395523-CDS-F-serratus_M_contig1002:248773..249118 | 1622928794.7395523-CDS-F-serratus_M_contig1002:248773..249118 | Fucus serratus male | CDS | F-serratus_M_contig1002 248774..249118 - |
1690962575.2363582-CDS-F-serratus_M_contig1002:248773..249118 | 1690962575.2363582-CDS-F-serratus_M_contig1002:248773..249118 | Fucus serratus male | CDS | F-serratus_M_contig1002 248774..249118 - |
1622928794.7751355-CDS-F-serratus_M_contig1002:249450..249798 | 1622928794.7751355-CDS-F-serratus_M_contig1002:249450..249798 | Fucus serratus male | CDS | F-serratus_M_contig1002 249451..249798 - |
1690962575.246666-CDS-F-serratus_M_contig1002:249450..249798 | 1690962575.246666-CDS-F-serratus_M_contig1002:249450..249798 | Fucus serratus male | CDS | F-serratus_M_contig1002 249451..249798 - |
1622928794.7900217-CDS-F-serratus_M_contig1002:261838..261958 | 1622928794.7900217-CDS-F-serratus_M_contig1002:261838..261958 | Fucus serratus male | CDS | F-serratus_M_contig1002 261839..261958 - |
1690962575.262343-CDS-F-serratus_M_contig1002:261838..261958 | 1690962575.262343-CDS-F-serratus_M_contig1002:261838..261958 | Fucus serratus male | CDS | F-serratus_M_contig1002 261839..261958 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1002.139.1 >prot_F-serratus_M_contig1002.139.1 ID=prot_F-serratus_M_contig1002.139.1|Name=mRNA_F-serratus_M_contig1002.139.1|organism=Fucus serratus male|type=polypeptide|length=271bp
MRAILILIAFYVSGAQAFFGTPLRPISSSASPSRPHSCAQSRMSGTGYAS SRAGKAKAVEEVSDLLRKSSLVFATPVAYLSANEVVQLRLNIPEGCTARV VKNKLMRIAAKDTDFEEVCEMTTGGNFWIFVESEDNLAVPIKYIQDFAKR MDPKEKIGWDQPFRGGVFDKKLVDGPGVIAISKLPTKHELYQRIAVALNL IPTKIGRSIKLVPTKVGRAVKLAFAEEGEGGDGSEGAAAEEAPAAAEAAT PEGEAAADPPVAAEEVPATE* back to topmRNA from alignment at F-serratus_M_contig1002:248374..262207- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_F-serratus_M_contig1002.139.1 ID=mRNA_F-serratus_M_contig1002.139.1|Name=mRNA_F-serratus_M_contig1002.139.1|organism=Fucus serratus male|type=mRNA|length=13834bp|location=Sequence derived from alignment at F-serratus_M_contig1002:248374..262207- (Fucus serratus male) ACCATGAGTGCTGCATCCGCCGCGAGCTGAGGGATGAGGGATCCCTGCCA
GGCCAAATTAACGCGGCGCTTTAAGGTTTCCAAAGAACTTAAACGCATGT
ATAATCTTCGTAGCCGCAACAGTCATACCGCCTGAAACATAGGAGAGACG
CATATCACAAGCACTGCTTGTTTGTACACAATTTGATAGAGAGCTGGACT
TTCCTGAAAGACTTGAGAAAGCAAAGAGAGGAGTGGCAAGGGAGAACTCA
TGAGGGCTATTCTCATCTTGATAGCATTCTATGTATCAGGAGCTCAGGCG
TTTTTTGGTACCCCGTTACGGCCGATATCGTCGAGCGCTTCGCCATCTCG
ACCACATTCATGCGCTCAGGTGAGATATTCAATTAACAACTCAACGGATC
CGGAGGCGGGAGCCCAGGTCGAAGACCCATCGATCCTTGCGTTCCGCTTT
CGCTTAGCTGGGTAACACCATGCGACGACCGAAACTAGTTTCTGTGTCCA
AGAAGATCTTGTTTGCTGGGAATGACGAGCGCTCTGCTGTCAGGGCCGCT
GTCATGATAGCCGCAAACGCCTCATCTAAGCATGTGCGTCATGCTGCCCG
CTTCCACACGAGAACTTCTTTCCTCAGGACTGACAACTGAACTGCTTGTC
TATCTGTGGGGTTGCGTATATCTCGTCCTGGTGTGGTTGGTATTTTTTTC
TCGCTGGGGAGAATCTTGCAAGCCTTGATGTGGTCATCACCGCCGCAAGG
AGCGTTCGTTCTGCTTCAATAGATAAGTTGTACAAGTACATAAATTTATT
GGTCTTTGGTACTCTTTCACCGCAGTTTTATTTATTTTCAACCAACTAAA
ACTAAATACATAAACGCCGCTACATACATGTACAAAATTACTTGAACGAG
GAGGACTCTTTGAAATATCGATACTATACAAGTAATAAATCTGAACGCAT
CCTAACCTTCTGATCAGTCAAAAGGTTTAGGTGGGAACATTGGCTGTAGG
GACAAACACCTCTACAAAGGGTTCCCCAATATAGTTACATAGGGTCAACT
GTACAGTTTGTTTCGCTCATTCGCTCTCATGTTCGTCCGGTGGGCCCATC
AAACGTTCCAGGGTACGCGTATCACAATGTAGGTTGTGTGTGTATTAAAT
TTCACATGACCGCGCCATCCGGCCCTGTCCTGCTACTGTAGTGCCCAGTT
GGGGATTAATGTTATTGCATGAAAGTATATTTTTATATCTAGTCATTACA
TGTAGAAGGTTGGGCATCCACCGACATGGTTGCCAACCCTGCTCGTGGTC
AGCTGAACAGGGAAGCTACTTTTTTTCTTCCCTGTCCTCATTCGCGCCTG
ATAATTTTCAATTGATAATTTTGTTTCTCGAGACAGGTTCGGCCGTCCCG
TCCCCTTTCAGCCTAATCATTTTCCACACTAGTAGTAGGCTGAAACTGGT
TATTACTGACGGGTTCCTCTCCTTCCTGCCCGGGTGACCAGCTTGATTGC
TTGATCATCGCAGGGCGTCACCTTTTGGTGAAACTGGACGAAACGTACTC
GCCAGGTGGGGACAGCAGCACGAACAATCAAATCGACAGAAGCCGCATCT
CGAATCATTCATTATACTACTGTTGATATTGAGCCTTAGAACGACTTGCA
TAATTTTTACATTTATATATACAGAAGTAGTACCAAGTATCTGTACCTGA
CTGGTACTTGTATCCTCGTGGGTGTACGACTGGGCTACGATTACCGCCCG
ACTTCTTCAATCTGGCACCACGAGGAAGTCCAGATTGTTCCCACAGGAAC
ATCATCCATGCTCGTGTGTGCTCTACACAGTGGTTTTGTACAAGCTTTGG
AGAACCCGACTTAATTAATCCTATGTACTGCTGTCTGCTGTGTCTGTAGT
TTCTTTGTGCTGAAACCCTCTTCTACTGTACCAGACATGTTGGAAAAATG
ACCCTCGAGATCCTCCCGCCAAAGTTTAGAAACAAGCACCGGTACACCAC
GACGAGTACAAACAGTAGTTTAAATACAGGTACACCACGACGAGTACAAA
CAGTAGTTTAAATACAGCAGTTTTAGTACATCAACAGCTTGTATTATTAT
AAATAGTAATATTTTTATATTAATAGTAGTTCGCTAAAGAGAAAATATGA
GTGCCACATGATTCAAAACCAAGGATATTTTAAACGGTTTTACCCCAAGT
TTATATCGACGGGCAGTGTGCGTGTGTGTTGTCATCACTTTTAGAATCAA
CCAGATCTGGTTTCCAATCCTGCTCGTGCTCAGCTGAAGAGATAAAATCA
AGTTTTCTGCCCTATCCCCGTTCGCGCCTGAGAACATGGTCTCGCGAGAC
AGGTTCGACTGTCCTGTCCCGCGTCAGCCCACTCATTCTCCACACTGATA
ATAGACTGAATCTAGTTTTTGGCTCACTGGCTTCCCCCCTTCGTCTCGCT
TTCCGCGTCGATGTCCCATCTAAACCCCCAATCGCCTTCGGGCCAGCCCG
AGTTAAGCAGGTTACGCATTTGCGTACATTGGCGATGGTATTCACGCCAA
AAAATCACCGGCACAGGACCAGCAATGCCCAACGCAACTCGAGTAACTTT
GGGTTGCTGCCTAGACTTCATAGATGTATGTTTCTTCCTAGAATACAAAC
GTTCTGGGATTTTTCGTGAGATTTGATTGGTTGCAAGCCGACAGTCTCGG
GCCCCACCAGCCAGGAAATGTAAGAATGAATGTATGTATGGTCATCACAT
ATAGCAGAGTTTGGATCAACCAGGTAAGGTTGGAAATCTGCTCATGGTCA
GCTGAACAGCGAAAATGAATTTCCCCTGTCCCCGTACGCGCCTGAAAATT
TGGTCTCGCGAGACGGGTTCAGCCGTCCCGTCCCGCGTCAGCCTACTCAT
TCTCCATACTGGGGCTGAATCTGGTGCTTACTCACGAGATTCCTCCCGAT
TTCCGTACGGCGTCCATTTCGTTATTCAAACCGCCACACGCCATCAGGTC
AATCCCGAGTTAATCGGGTCACGCAATTACGTACCGATGGCGTTCACTGC
CGAGAGTCCACCGGCACATGGCCAGTAGTCCTCAAGGTAGTTCGAGTAAC
GATTGATGCCATTTTGCAGGTCACCATGAACCAATTAAGGTGCGCCTGTC
TTTTCTCACACCCACTATTGGTATGAAGTGGGCATGTTGGAAGTGTATAC
CGCTCGCCAAAGCGGTCGCCCTCGCCATGGAATTGAACCAGACTGAGCAC
CAGCCACGAATCGGGAAATCGCAGTCAGCTGAGGTGTTTGGTCAGGGTTA
TCCTTGGGGTTAGGTTGGGTCCACGCCCCCCCCCTACAAAAGAGAGTGGC
GTCGGGTTCGAGTTCGAGGCAAAATCGTCAGATACAGCCGAAATCCGCCT
TCGCTTGTCCGCCATCCCGCCAACCGACTTGGCTCTACTTTCCCTTCTAT
AGTACTTCGAAGTATATTTTAAAATTTACTTTGGCTGTAAACTCCTTTGA
CATGGGAAGAACATTTTTCTATGAAGTGGTAAAAACGTACCGATGTATTA
AAAGTGTACTCGTAGTATACTAATAATATAGTATAGTATCCAAGTACGAA
GCAAGTTATGCGAGAACTGTCGTTGCCTACTCATGAACCAGAGCACTAGT
AAACACATTAATTAGAGCTATGACGACAGAGCGGGATTATCATTTCGGTC
CACAGAAAAGTTTCGCGGGGTTATGCTAACATCGCGAGAAAGAAAGAAAG
ATGTCCCCACGGTCTAGACGGCGTTCCAAACTTCGCCCCGCTCGCCGCTG
CCTCGCGCTCAAGCATTCAGACCTGACTGCCTTGGCTCTTGGGCGATCGA
ACGGCCCTCCGCAGCCGTCGACATTCGCTTCTTACTCGTTCGATATTCAA
GTACGCTTGTGCTGTCGCCCCCAACCAGCCTTGCGGCGACGGCATTGTCG
CCTGTCTGCCTTCGCCTCCAAATCTCACCACTCCGCGCTTAGCAGCACCA
AGTTTCCACATCTAAGGCCCGGAAGGGATCGAGTGCAACTGGTGAGCACC
GTGAAGGCTGCTGTCCTCCTCCAACGCTCGCCAACCGTTCGACTTATTAA
TAGCTAGAAACGGCGGTGAAAAGGGTATGTAGTGTTTTTGGACGGTGGGT
CCAGCTTTTGGTCACGGTGGTGCTCACATCAGGTGCGCATGCATGCCTTT
CTGGACGTCGCCTTAGCCGTGTGACGCGACGAGTGGTGCGCGCTGGGGCA
GAGGAAGCTGCCGTCGCAGCAAACGATGATTATCTTCCCGCCTCACCTCG
GCTTGCTGCAGCGCGTGCTGCCGTCCATGGACTAAATTATTTGATGGAAT
TAAGAATTAATGTATGCGGCGAGGATGGAAGGCGTCTCGATCTCCAACGA
GCCAAGGAAGCACTAGAACTCTTTTTGCGCGAAGAAAAAAGATAAGCGTG
GGAATTTCTTCATATTTTCCAGGTTATTTGGTCTGTTGTGCCGGCTTGGA
ACGGCGCTGCAAACTCGAAAAGAAAAGAAAACGATCAAGGAAAGGTGCAG
GGTTTGTCAGGACATGTTGAGTGCCCGTTCGCGCGGAATGTGGAAGCTAA
AAGCCTGACCGCGGTACACCTTCCTCTTCCTGTTTTTGAAGAAAAATCTA
AAAATAAACTTCTGAGCATCCCCCAGACTGAGGGGGAAATTGTCAAGACG
TTAAGGCAGGAACATAGGCTGCAAAGACCAAAAAAAAAACTCTATGGCAT
TTCATCGTGTTGCCCGATGGTAGTAACATAGGCCAACAGTATAATGCCGA
GGAGAAACCCACCGTTGTACTGAATGCTAGCATTAATCGCCATAAACAGA
GGCAAAAGGCACGATGAACTTGGATACAGCTCAATTTTAATACATTGGGT
CTGTCTGGGATCGGATCGGTGTCAACCCTATTACATTGCCACATTATTAG
CCATCAAACAAATGACCGATTGACGAGGAAGAAGGCAACGTTTGGTTCCT
GAGAACTATCAGGTGAATCTAACTGCTTAGAGGCAAAGGAAGTTAAGTAA
CATCACCTATGCAGTGCAATTTTCGGCGCAACTAGTAGTTAGTGAGATAA
TACAGGTACAGCACTAATGTATAAATACACGATCACCACATAATTAGTAT
TACCTTTGTGAAAGCGAGAAAAGGAAGGCACATGCTGACTATGACAGGAG
TAGCTAACTGTCTGCTTTATGGCGTCACTTTTGCCAAACGCCTCCATATT
TGGTCGAGGGTGTTTCTTTTGCGCTGTTGCCGGTAATGCTTGGAAGCGAC
TACTATACGTGTACAGTAACAACATTCCCCCTCGCCCCGCCGGATTGGTT
TTCTTACCACTACGTACATAGGCAGCAAGATCAAACTTTACTCGAGAATA
CCGAAGAAAGATTCAGGCAATATCTCCCAAATTATTTTGCTAGCTAGACT
GTCGATGCTACGCTACCTGTGTACAGTACGCGACACATGTTGAGAATCTC
AATATCATAGTTGAGAATTTCAGCCTGATATTTTTGGAAAATCAAGCATT
TACAGGTAAGCATTTGTGCTGAACTCGAGGAGGAAATAATAATTAGAAAT
CGGTAAAAAAACTGCCAGAATGTTACAACACTCCAGCCCGGAAAAATAAG
AAACTGTCCTAACACCTCTCAAGGCCACATCAGGCGCTCCCAACCAAGCT
GTATCCCCTCCAAAATGGAATTCAACTGACGGATATTTTTTCATGAAAGG
CCAAAAAAAATCAAATACCAAATATTGCAACACCATTTTTTCTCCGATAG
AATTAGCTAGATAGAATCGGCAACGGCTCGGCTCCCCATCTGCCTGGTGT
ATAGCAGTGCTGTCGCCTGTATAGAGAATTGTACCGCAGCAGACTCGTTG
GAGCAGACGATAGAAATACCTTGACGTGCACAGCATCTTGGTGGCCGATT
CGCGGTGGTGTGGGTACGCGGCGATGAATCTATCCCACGACGCTTTGCGG
GACCTGACAGCCCTTACCGAGTTAAATTTTGAAGGCGGGATTCTTGAGCG
ACACGTCAGACAAACCAAGGAACATGTAATGAAGGGCCGCCTTGTTGGTG
CACCTAGCTTGGACGGGTTTCGCATGTCATTGCAGCTGAGGCGCGTTGGT
GTTATATCGGAAAAAGAACACTAACTGTGGGAGACTCTTCAGCGCCTTCT
TCTGGACCACCACCCCTTCGGTCTTGTTCCAAGGGGAAACGGCCTGCCGC
CAAGTCAGGGGCTGGAGCTGGCAGCAAGCCAGTCGACCGAGGCCTCGGGG
CAAGGAAGCGGGGTGCGGCAAACACCTTGGGCGGCAACATCGACTGTTGA
GCCAAAGCTACCGGCAAGCCGGTAAGATGGCTATATAGATTACTACCGTA
GTAAAAAACTGCTGTACTGCTTGTACTGCTGTGCTGTACATGTGGCGCAT
ATTGCTGTCTACTGCTGTGTGTGCGTACGTCGTACTACGTACAGTACACG
AACTGTACTGTACCCAGTTTACCTATCATTGCCTTCACTCGTTTTACCTT
TGCACTGCTGAATTTTCTTGGGTCCCAGGATAGGATAGTACCATTCAAAG
TATATCTGTGCGGTGGGTTTTGTGTTTGTATTAGGTGTACAGTACCACAA
TTGTACTTCCAGCGCTCGGGGTGTTGTCCGTTTTTTGTTTTCTATGTTCT
TATAAATCAGCAGTAGTGCCGCTCTCTCTATAATACCGCATCTTGCAATG
CTGTGAATTACTTTAATACAGTATGCTATTAATAGCTGACTCTTGCCGAG
CTGAGCTTGGAAGCGGAGATTGTGAGCTCTACTGGCAGTATATTACCATC
TTGAACCAAGTTCATTTTTAACCTTGCGTGCTGAACAGGTCAAGAGGACT
CGCGGAGACACGGTATAGGAAATCTCCCACGTCCAGTTCCCGTCACCGCC
ACCACCGTCCAGGGTGTCATGTCGCTATTGCCTCAATACTTTCGAATCGG
CGCAAGGTCGTGGGATACACGAGGCTGCGATTCACAAAGTTCAACGAGGG
GTGGACGGCGACTGCCTGGGGCGGCGAACGCGCCGACGTGAGGATGTGCT
GAAGTCATGGGACAGCGTCGGGCGTGGCCGTTGTTGGGTGTTGCGCTTCA
GTAACACCACCGAAGGCGTAAGCTCTCTGGGCCTAACAGCGCAGCGGCGT
TCATTCTGAAGCCAATCCAGTATGAAATACCTACGGACCAACTTGAAGTA
CGACGGGTTTTCGCCCCCCCCAGCCCCAGCCGAATAAGGCCCGCGGCGCA
GGGAAACGCAGAAGGTACACCTTCAGGGAGAAATCGAACGTCGTTGAGAA
GCTGCGTTCGCTAGAGGCACGAAAGGAGGACATCTACAGGACGGAGTTGC
TCTCCCCACCATAGTACCTGGCGCATGAAAGTAAGATCACACCAGCCTCA
CGAGCGAGTGAACCTCGAACGAAGCTGTAGTCGTGAAGGAGGCGTCGGGC
GAGGTGACGAAGGACCTCTTCGCCAAGCAATCACCCCGACGGTGGTTTCC
GGAAGCAGAGCAACAGCTCTACGAGCTGTTCATGGCGCGCCGGAGGAGGA
AGCTGAAACTTTCCTCGCCGTGGGTCACGGTTACGTACCGGAAGCTGCCT
CGGGATATGTATCCCGACAATCCGAAGGCGGTAGCTTTCCGCCCGTCCTA
CAGATGGGCGAAGCGGTGAGCCAACACCCACAACCTGTCGAAGGGACGCA
GGAGCAACCTCAAGAATAAATCTGTCGAGGAGCGTTTGCCGTAGATCCGG
CGATTCCTCAGAAGGTTTCACAAGTTAATGCAGGAGCCAGCGCGTCGCGT
GGTTTCATACGCGGAAGCTGGGGTGCGGGCTGCTCAGCCACGAGATCCGA
AGTATGGGCGGTTTCAGCTGAACGAGCGGTTCAACTCTGACCAGGTACCA
TTGCCCTTCGTAAACGGCCGGTCGGAAAAGTGGGCCCCCAAGGGAAGCAA
GCGCGTTTCTACCGCGCAGCCTTTTAGTGGGTTGAAGAAAAGGCAGTGCA
CGATTCAACCTACTATTGGGCCGGGTGGGATCTCGAAGGTGGAGAAGAAG
TTGTATGACCCTCGCGTGGACGTTTTCTTCCAGAAAAATGCGTGGGCCGA
CAGCGATTTCTGCATGGCGTGGGCTAAGCGTTGCTTTCGCAAGAGCCTAA
CGCAAGGGGGGGCGGGGTGCCCGCGAAGGAATCGCTGCTGACGTTGGACA
GCTTGCACGGACAGAACACGGAAAAGTTTAAAGCGTACATGAAGGAGTGC
AACTCGCTGGCTTGTAGCCTCCGAGGTAATGCCACACCAGCGAGTTGCAC
TCCTTCTTCATGTACGCGTTGAACTTTTCCGTTGTCGGTTCGAGCAAGTT
GTCCAACGTCAGCAGCGATTCCTTCGCGGGCACCCCGCCCCCCCCCCCCC
CCCTGCATCAGGCTCTTGCGAAAGCAATGCTTAGCCCACGCCATACAGAA
ATCGCTATCGGCCCACGCGTTTTTCTGGAAGAAAACGTCCACGCGAGGGT
CATACGCCTTCTTCTCCAACTTCGAGATCCTCTTCCCGGTGCCCCGAAAA
ATGATCGCGCACTGCATGAGCTTCCAACCCGGCCCAATAGTAGGTTGAAT
CGTGCACTGCCTTTTGTCCAGCCCACTAAAAGGCTGCGCGATATAAACGC
GCTTGCTTCCCTTGGGGGCCCACTTTTCCGACTGGCCGTTTACGAAAGGC
AAGGGTACCTGGTCAGAGTTAAACCGCTCGTTCAGCTGAAACCGCCCATA
CTTCGGATTTCTTGGCTGGACTGCCCGTACCCCAGCTTCCGCGTCTGAAA
CCACGTGCCCCTTCCGACGCGCTGGCTCCTGCATGAACTTGTGAAAACCT
TCTGAGGAATCGCCAGATTTGCGGCAGACGCTCCTCGACAGATTTGTTCT
TGAGGTTGCTCCTGCGTCGCTTCGACAGATTGTGGCGGTTGGCTCACCGC
TTCGCCCATCCGTAGGACGGGCGGAAAGCTACCGCCTTCGGATTGTCGGG
GTACATATCCCGCAGCAGCTTCCGGTACGTAACCGTGACCCACAGCGTGG
AAAGTTTCAGCTTTGCCTCCGGAAACCACCGTCGGGGTGATTGCTTGGCG
AAGAGGTCCTTTGTCACCTCGCACGACGCCTCCTTCACGATTTCAGCTTC
GTTCGAGGCCCACTCGCTCATGAGGCTGGTTTCGATCTTACTTTCATGCG
CCAGGTACTGTGGTGGGGAGAGCAACTCCGTCCTGTAGATGTCCTCCTTT
CGTGCCTCTAGCGAACGCAGCTTCTCCACGACGTTCGCTTTCTCCCTGAA
GGTGTACCTTCTGCGTTTCCCTGCGCCGCGGGCCTTATTCGGCTGGGGCT
GGGGGGGGGGCGAAAACCCGTCGTACTTCAAGTTGCCCCGTGGGTACTGG
ATTGACTTCAGAATGAACGCCGCTGCGCTGTTAGGTCCAGAGTCAGAGCT
TCCGTCTTCGGTGGTGTTACTAAAGCGCACCACCCAACAACGGCCACGCC
AAAGCACATCCTCACGTCGGCGCGTTCGCCGCCCCAGGCAGTCGCCGTCC
ACCCCCCGTTGAACTTTGTGAATCGCAGCCTCGTGTATCCCACGACCTTG
CGCCGATTCGAAAGTATTGAGGCAATAGCGACATGACACCCTGGACGGTG
GTGGCGGTGACGGGAACTGGACGTGGGAGATTTCCTATACCGTGTCTCTG
CGAGTCCTCTTGACCTGTTCAGCACGCAAGGTTAAAAATGAACTTGGTTC
AAGGTGGTGACATACTGCCAGTAGAGCTCACAATCTCCGCTTCCAAGCTC
GGCTCGGCAAGAGTCAGCTATTATAGCATACTGTATTAATTCACAGTATT
GCAAGATGCGGTATAATGTATAATAGAGTGGTGATATACAGATGTAAATG
TACGTGGTTAAGCAGAGCGGCACTACTGCTGTTTTATAAGAACATCGAAA
ACAAAAAACGGACAACACCCCGAGCGCTGGAAGTACAATTGTGGTACTGT
ACACCTGATACAAACACAAAACCCATCGCACGTAAATACTTTGAATGGTA
CTATCCTATGCTGGGACCCAAGAAAATTCAGCAGTGCAAAGGCAAAACGA
GTGAAGGGAATAATGGGTAAACTGGGTACAGTACAGTACAGTTCGTGTAT
TGTACGAAGTACGACGTACGCACACACAGCAGTACACAGCAATACGCGCC
ACATGTACAGCATTACAAGCAGTACGGCAGTTTTTTACTACGGTAGTATT
CTATATAGCCATCTTACCGGCTTGCCGGTAGCTTTGGCCCAACAGTGATG
TTGCCGCCCAAGGTGTTTGCCGCACCCCGCTTCCTTGCCCCGAGGCCTCG
GTCGACTGGCTTGCTGCCAGCTTCAGCCCCTGACTTGGCGGCAGGGCGTT
TCCCCTTGGAACAAGACCGAAGGGGTGGTGGTCCAGAAGAAGGCGCTGAA
GAGTCTCCCACAGTGTTCTTTTTCCGATATACCACCAACGCGCCTCAGCT
GCAATGACATGCGAAACCCGTCCAAGCTAGGGGCACCAACAAGGCGGCCC
TTCATTACATGTTCCTTGAGTAGTACGAAGTGTCGCTCAAGAATCCCGCC
TTCAGATTTTAACACGGTAAGGGCTGTCAGGTCCCGCAAAGCGTCGTGGG
ATAGATTCATCGCCGTGTACCCGCACCATCGCGAATCGGCCACCAAGATG
CTGTGCACGTCAAGGTATTTCTATCATCTACTCCAACGAGTTTGCTGCTG
TACAATCCTCTCTACAGGCGACAGCACTGCTATGCACCAGGCTGTTGGGG
AGCCGAGCCGTTGCCGATTCTATCTAGCTAATTCTATCGGAAAAAAAATG
GTGTTGCAATATTTGGTATTTACATGCTTTCAGGGAGGAAATGGATCATT
TTTGGCCGTTCGATTTTTTTCAAAAATATATCCGTCAGTTGAATTCCATT
TTGGAGAGGATACAGCTTGGTTGGGAGCGCCTGATATGACCTTGAGAGGT
GTTTGGACAGTTTCTTATTCTTTCGGGCTGGAGTGCATTGTGGCAGATTT
TTTCCCGATTTATAATCCTTATTTCCTCCTCGAGTTCAGCACAAATGCTT
ATGTGTAAATGCTTGAATTTCCAAAAATCTCAGGCTGAAATTCTTAACAT
ATGTCGCGTACTGTAGCAGGGATAAATGACATTTAACAAAAGAGAGGATT
GTGCTGCCCATCCGCGAGGTGTGGTATTATCCTTTGCCTCTGTGGTCGGC
AACATTTACCAAGTTTATCGGATGTTAATTTTAGCTCTAATATAAGAATA
AATGGGGAATTTGTGGCTTACCATTGTATTAATAGTGGTACTGTTTTATA
CTCTATCGTCGGTTATGGTTTGTCTGCGCGTAGCCATGCCTAAACGTCTC
CTCCATACTGTAATATTAATAGTGCTACAGTAGTGTACTGGTGTAGACTA
TGATTGTAATGTTGATAACGCTATTTTGTTCCTCGCAGTGTCTTTTTTTT
TAAACGATGTACCATGTATTCAGAAGTTGCTGGGTCTTCTCTGATTCTTG
CACCCCAGATTCTGGTGTTGTACACTCACAGCAACTTAGGCAGAAAGTAG
GTCTCGTTGCTAGATTCGGCTGTTCGAGCCTGAGGGCGTCGTCGTGGCGC
AGGCGCTTTTTGATCACGTCAGGCGGGCCCACCTGACAAGGACTTTGTCG
CGATTTGAGATTTCTGGAGGTGCTACCATCTTGCGATCCATGAACGTTCT
CGTTGTCCTCTATGGATTTTGTAATTGGCACTGGCAACGACTGACTCTTG
TTGAGTCGAGTCCCTGCAACGCTTTATTCGGTCGATAGAGAAAACCACGA
CGGTTCCCAACTCAAGTACTATTACCACCATGCAAGTACCTCTTTGTGAT
GATAACTCTCCCAACACACCCTGCTCAGTATAGTATACTGTCTTTGTTTA
CAGCCAACACCTTACACGCCCCACCCAATGCCCATGCCCATGCCTACCGA
CGTGCTCACGAAGGAGTACGCTTGCACTAAATACGTTCGTTCGTGTTATA
ACCACGCGCTCTCGCTTAAAGCTGCATGCTTCGTACGAATCAGATGGACA
CGGTTGCTCAACGCACTCGAGTTCGGACGAACAGCCCACTACTATATAGA
GGGACATATTGCCATCAGTGCCTACCAGTAGATATCCCCTCAAGTCGCTT
GGATAGCACCCACCACCTTGTCGACCGTTCCACGATAGATCGCCAGCGTT
CAGGGGAAGACCCCGGGTAACGACTGTTCCTTACCCCCCCCCCCCCCTCG
ATTTACCTGTTCAAGACAACGCTCCCGTGCTCGCCCGCGTGTCTCTGCCG
TTGCCTCAGTCGCGCATGTCAGGCACGGGTTACGCGTCGTCTAGGGCAGG
GAAGGCGAAGGCGGTTGAGGAGGTTTCCGACCTGCTTCGGAAGTCGAGCC
TCGTGTTCGCCACACCGGTGGCGTACCTTTCGGCTAACGAGGTCGTGCAG
CTGCGCTTGAACATTCCTGAGGGTTGCACCGCTAGAGTGGTTAAAAACAA
GCTCATGCGCATCGCGGCCAAGGACACGGATTTCGAGGAGGTCTGTGAGA
TGACGACGGGCGGGAACTTCTGGATTTTCGTTGAGAGCGAGGACAACTTG
GCGGTGCCCATCAAGTACATCCAGGACTTCGCCAAGCGTATGGATCCCAA
GGAGAAGGTACGTGCCGATAGCAGACACATATATCGCTTCCTCCATCGCA
ACGTCTGGGATTCGGATAAATGTCTTCAGCCCCCCCCCCCCCCCTCCCCC
CTCTACACACTCCCCTGTGTTGTGAGTGGAAACCTGGGACCATATTGAAT
GGGAGCACGGGTTAATCAGCTGACCGCCCCTTCAGCTGTTCCGACTGTGG
GCAGCTTTCGCTCTAGGAAAATATACCGAAAGTGAGCTGCAATTTGGACT
CTTTGCCGGACCAATGTTTGTTTCGGATTGGTGTCCGATTCGTTATCTTC
GCCCCCAACGCGCGCCCACCAACACACGTTCACGAACAGATTGGATGGGA
CCAACCTTTTAGGGGCGGCGTGTTCGACAAGAAGTTGGTTGACGGACCCG
GCGTGATCGCAATCTCGAAGCTCCCCACGAAGCACGAGCTCTACCAGCGC
ATTGCGGTCGCTCTCAATCTGATCCCCACCAAGATTGGCCGATCGATCAA
GCTGGTGCCTACCAAGGTCGGCCGCGCAGTGAAGTTGGCATTCGCGGAAG
AGGGCGAGGGTGGGGACGGATCGGAAGGCGCTGCCGCGGAAGAGGCGCCG
GCAGCAGCGGAAGCGGCAACACCAGAGGGGGAGGCGGCGGCGGATCCCCC
CGTAGCGGCAGAGGAAGTGCCCGCCACGGAGTAGGAGGGATCGTGATGGT
GGTTCTTTTACACCACACATGCTGCGGGTCCTGCATCAGTGTAGAGCTAG
ACGGGTAGACTCGGGGGAAATGCGTGGGGTGCCGAGTAGTCCAGGATGAT
GCTTTAGAGCGAGTGTAAGGAGTGGGGACAGGCGCACAGTACGCGTGTGC
GTGTTTCATGGAAACGGTCGGGATCACATCACACTTTTATATTTTTCCCA
CCTGTTCACACATCTCACCCCCCTCTAATAGTAGGCTCTTATTTCTTTCC
ACGAACTGTGGTGTACGAATCACAGCCGAAGTGTTTACAACACAGTTATT
AGAAAGGGAAAGGGAATGTCCTGGAGCAATGCGACCAGCCAATCGAAGCC
CTCATGAAGAAAATGTATAAAGAGGTCCTAGTCA back to topCoding sequence (CDS) from alignment at F-serratus_M_contig1002:248374..262207- >mRNA_F-serratus_M_contig1002.139.1 ID=mRNA_F-serratus_M_contig1002.139.1|Name=mRNA_F-serratus_M_contig1002.139.1|organism=Fucus serratus male|type=CDS|length=1626bp|location=Sequence derived from alignment at F-serratus_M_contig1002:248374..262207- (Fucus serratus male) ATGAGGGCTATTCTCATCTTGATAGCATTCTATGTATCAGGAGCTCAGGC GTTTTTTGGTACCCCGTTACGGCCGATATCGTCGAGCGCTTCGCCATCTC GACCACATTCATGCGCTCAGATGAGGGCTATTCTCATCTTGATAGCATTC TATGTATCAGGAGCTCAGGCGTTTTTTGGTACCCCGTTACGGCCGATATC GTCGAGCGCTTCGCCATCTCGACCACATTCATGCGCTCAGTCGCGCATGT CAGGCACGGGTTACGCGTCGTCTAGGGCAGGGAAGGCGAAGGCGGTTGAG GAGGTTTCCGACCTGCTTCGGAAGTCGAGCCTCGTGTTCGCCACACCGGT GGCGTACCTTTCGGCTAACGAGGTCGTGCAGCTGCGCTTGAACATTCCTG AGGGTTGCACCGCTAGAGTGGTTAAAAACAAGCTCATGCGCATCGCGGCC AAGGACACGGATTTCGAGGAGGTCTGTGAGATGACGACGGGCGGGAACTT CTGGATTTTCGTTGAGAGCGAGGACAACTTGGCGGTGCCCATCAAGTACA TCCAGGACTTCGCCAAGCGTATGGATCCCAAGGAGAAGTCGCGCATGTCA GGCACGGGTTACGCGTCGTCTAGGGCAGGGAAGGCGAAGGCGGTTGAGGA GGTTTCCGACCTGCTTCGGAAGTCGAGCCTCGTGTTCGCCACACCGGTGG CGTACCTTTCGGCTAACGAGGTCGTGCAGCTGCGCTTGAACATTCCTGAG GGTTGCACCGCTAGAGTGGTTAAAAACAAGCTCATGCGCATCGCGGCCAA GGACACGGATTTCGAGGAGGTCTGTGAGATGACGACGGGCGGGAACTTCT GGATTTTCGTTGAGAGCGAGGACAACTTGGCGGTGCCCATCAAGTACATC CAGGACTTCGCCAAGCGTATGGATCCCAAGGAGAAGATTGGATGGGACCA ACCTTTTAGGGGCGGCGTGTTCGACAAGAAGTTGGTTGACGGACCCGGCG TGATCGCAATCTCGAAGCTCCCCACGAAGCACGAGCTCTACCAGCGCATT GCGGTCGCTCTCAATCTGATCCCCACCAAGATTGGCCGATCGATCAAGCT GGTGCCTACCAAGGTCGGCCGCGCAGTGAAGTTGGCATTCGCGGAAGAGG GCGAGGGTGGGGACGGATCGGAAGGCGCTGCCGCGGAAGAGGCGCCGGCA GCAGCGGAAGCGGCAACACCAGAGGGGGAGGCGGCGGCGGATCCCCCCGT AGCGGCAGAGGAAGTGCCCGCCACGGAGTAGATTGGATGGGACCAACCTT TTAGGGGCGGCGTGTTCGACAAGAAGTTGGTTGACGGACCCGGCGTGATC GCAATCTCGAAGCTCCCCACGAAGCACGAGCTCTACCAGCGCATTGCGGT CGCTCTCAATCTGATCCCCACCAAGATTGGCCGATCGATCAAGCTGGTGC CTACCAAGGTCGGCCGCGCAGTGAAGTTGGCATTCGCGGAAGAGGGCGAG GGTGGGGACGGATCGGAAGGCGCTGCCGCGGAAGAGGCGCCGGCAGCAGC GGAAGCGGCAACACCAGAGGGGGAGGCGGCGGCGGATCCCCCCGTAGCGG CAGAGGAAGTGCCCGCCACGGAGTAG back to top
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