prot_F-serratus_M_contig1002.139.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1002.139.1
Unique Nameprot_F-serratus_M_contig1002.139.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length271
Homology
BLAST of mRNA_F-serratus_M_contig1002.139.1 vs. uniprot
Match: D8LTB2_ECTSI (50S ribosomal protein L10 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTB2_ECTSI)

HSP 1 Score: 202 bits (514), Expect = 3.800e-61
Identity = 128/246 (52.03%), Postives = 170/246 (69.11%), Query Frame = 0
Query:    1 MRAILILIAFYVSGAQAFFGTPLRPISSSA-----SPSRPHSCAQSRMSGTGYASSRAGKAKAVEEVSDLLRKSSLVFATPVAYLSANEVVQLRLNIPEGCTARVVKNKLMRIAAKDTDFEEVCEMTTGGNFWIFVESEDNLAVPIKYIQDFAKRMDPKEKIGWD-QPFRGGVFDKKLVDGPGVIAISKLPTKHELYQRIAVALNLIPTKIGRSXXXXXXXXXXXXXXAFAEEGEGGDGSEGAAAE 240
            M+A  + +    +GA AF GTP+    + A     S S+P + A    +     + R  K K +EEV  LL  SS+VF+ P +Y+SAN+VV LR ++PEGCTA+VVKNKLMRIA+  ++F ++ ++TTG NFWIF+E EDNLA PIKY+ +FAK+ D K+  GW   PF+ GVF   ++DGPGV+AISKLPTK EL QR+A+A+N +PTK+GRSXXXXXXXXXXXX  AFA E +     + AAAE
Sbjct:    1 MKAPTLAVVLCAAGASAFVGTPVVQPKACATTRRHSSSQPLNMAVIDTTKPPKLTKRPAKLKVIEEVKSLLESSSMVFSVPSSYISANQVVALRKDLPEGCTAKVVKNKLMRIASDGSEFAQLADVTTGENFWIFIEGEDNLAEPIKYVAEFAKQFD-KDTPGWGGSPFKSGVFGGDVLDGPGVVAISKLPTKKELMQRLAIAVNSVPTKLGRSXXXXXXXXXXXXKLAFAPEEDDAPEGDAAAAE 245          
BLAST of mRNA_F-serratus_M_contig1002.139.1 vs. uniprot
Match: A0A0G4GLP8_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GLP8_VITBC)

HSP 1 Score: 127 bits (320), Expect = 1.570e-31
Identity = 93/212 (43.87%), Postives = 131/212 (61.79%), Query Frame = 0
Query:   47 GYASSRAGKAKAVEEVSDLLRKSSLVFATPVAYLSANEVVQLRLNIPEGCTARVVKNKLMRIAAKDTDFEEVCEMTTGGNFWIFVESEDNLAVPIKYIQDFAKRM-DPKEKIGWDQPFRGGVFDKKLVDGPGVIAISKLPTKHELYQRIAVALNLIPTKIGRSXXXXXXXXXXXXXXAFAEEGEGGDGSEGAAAEEAPAAAEAATPEGEAAA 257
            G A+++ GK   +++ SDLL  ++L+FA   + L  NE V+LR ++PEG     VKN+L+R+AAK TDFE+     TG + ++FV  ED   V ++ ++ F K M D +E        +GG FD  ++D  GV AISKLPTK EL Q+IAV +N++PT++  S  XXXXXXX     A  +  +GG   EG AAEE  AAA+  TP  +AAA
Sbjct:   83 GTATTKEGKQATIDKFSDLLGDTNLLFALEGSKLGPNERVKLRRSLPEGTKIHTVKNRLLRVAAKGTDFEDYANGATGQSLYVFVTHEDYKGV-MEALKQFGKGMPDFREH----NVIKGGSFDSTVLDAEGVDAISKLPTKLELIQKIAVLINMVPTRLATSVKXXXXXXXRAINLALVDGKDGGGEGEGTAAEEPSAAAD--TPPADAAA 287          
BLAST of mRNA_F-serratus_M_contig1002.139.1 vs. uniprot
Match: A0A448Z550_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z550_9STRA)

HSP 1 Score: 117 bits (294), Expect = 1.380e-28
Identity = 69/163 (42.33%), Postives = 93/163 (57.06%), Query Frame = 0
Query:   46 TGYASSRAGKAKAVEEVSDLLRKSSLVFATPVAYLSANEVVQLRLNIPEGCTARVVKNKLMRIAAKDTDFEEVCE-MTTGGNFWIFVESEDNLAVPIKYIQDFAKRMDPKEKIGWDQPFRGGVFDKKLVDGPGVIAISKLPTKHELYQRIAVALNLIPTKIGR 207
            +GYA++  GKA+ VE V  LL  S +VF+ P ++++  E   LR ++PEG T  VVKN LM  A KDT+FEE    +  G N W F+E  +++   IK    F K    KE  G      GGV +    D  GV AI KLP+K ELY +IA  +N +PTK+ R
Sbjct:   38 SGYATTVEGKAEKVEAVKGLLDSSQMVFSVPASFITVAESQSLRRSMPEGTTISVVKNTLMNRAVKDTEFEEAASSLLKGANMWFFIE--EDIGASIKAWNAFTKETGKKETHG----IIGGVVEGNNYDAKGVEAIGKLPSKKELYAKIAGGINAVPTKLAR 194          
BLAST of mRNA_F-serratus_M_contig1002.139.1 vs. uniprot
Match: A0A7S3LDP0_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LDP0_9STRA)

HSP 1 Score: 118 bits (295), Expect = 2.250e-28
Identity = 64/161 (39.75%), Postives = 94/161 (58.39%), Query Frame = 0
Query:   47 GYASSRAGKAKAVEEVSDLLRKSSLVFATPVAYLSANEVVQLRLNIPEGCTARVVKNKLMRIAAKDTDFEEVCEMTTGGNFWIFVESEDNLAVPIKYIQDFAKRMDPKEKIGWDQPFRGGVFDKKLVDGPGVIAISKLPTKHELYQRIAVALNLIPTKIGR 207
            GYA+S  GK + V +V  LL  S ++F+ P + L+  +  +LR ++PEG T +V+KNKLM  A + TD+ E  +M TG N W FVE  ++++  IK  + F K    K+         GGV D+   D  GV AI  LP+K ELY +IA ++  +PTK+ R
Sbjct:   75 GYATSLEGKKETVAQVQGLLENSDMIFSIPASSLTVAQSQKLRQSMPEGTTVKVIKNKLMARAIEGTDYTEASQMLTGANMWFFVE--EDISATIKAYKAFIKETGKKDT----HDIFGGVMDQTYYDASGVDAIGNLPSKQELYAKIAGSIKAVPTKVAR 229          
BLAST of mRNA_F-serratus_M_contig1002.139.1 vs. uniprot
Match: A0A835YRM7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRM7_9STRA)

HSP 1 Score: 114 bits (284), Expect = 5.100e-27
Identity = 69/161 (42.86%), Postives = 96/161 (59.63%), Query Frame = 0
Query:   47 GYASSRAGKAKAVEEVSDLLRKSSLVFATPVAYLSANEVVQLRLNIPEGCTARVVKNKLMRIAAKDTDFEE--VCEMTTGGNFWIFVESEDNLAVPIKYIQDFAKRMDPKEKIGWDQPFRGGVFDKKLVDGPGVIAISKLPTKHELYQRIAVALNLIPTKI 205
            G +S+RAGK   +  V + L K++++FA P + L  N V  +R  +P G  ARVVKNKLMR+A +     E  V +MT G N W FVE  D+L+  I   +DF K ++ K+        + GV + K +D  GV AIS LP+K ELY+RIAV +  +PTKI
Sbjct:   45 GVSSTRAGKLATIASVKEDLAKATMIFAIPSSQLKVNSVTDMRKKLPAGTKARVVKNKLMRLAVEGAPQWEAVVGDMTKGENMWFFVE--DDLSESITVAKDFIKVVNKKDT----HAPKFGVLEGKALDAAGVEAISNLPSKTELYRRIAVGVKAVPTKI 199          
BLAST of mRNA_F-serratus_M_contig1002.139.1 vs. uniprot
Match: A0A7S2ZLQ0_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZLQ0_9RHOD)

HSP 1 Score: 113 bits (283), Expect = 1.380e-26
Identity = 63/147 (42.86%), Postives = 88/147 (59.86%), Query Frame = 0
Query:   61 EVSDLLRKSSLVFATPVAYLSANEVVQLRLNIPEGCTARVVKNKLMRIAAKDTDFEEVCEMTTGGNFWIFVESEDNLAVPIKYIQDFAKRMDPKEKIGWDQPFRGGVFDKKLVDGPGVIAISKLPTKHELYQRIAVALNLIPTKIGR 207
            +V + L KS+L FA P+   +  EV +LR  IPE   A  VKN L RIA  D+ ++   ++T G N WIF E  D +   ++ I+ F K    +E  G      GGV +  L DG GV A+SKLP+K +LYQ+IA+A+N +PTK+GR
Sbjct:   90 QVREQLDKSTLAFALPLEGYTVKEVSELRNVIPENSCALAVKNTLFRIAIADSTWDVAGDLTKGSNLWIFTEEAD-MKGTVEAIKKFNKEKKKEETNG----ISGGVMENTLYDGKGVEALSKLPSKQDLYQKIAIAINSVPTKVGR 231          
BLAST of mRNA_F-serratus_M_contig1002.139.1 vs. uniprot
Match: A0A1Z5K7S4_FISSO (Large subunit ribosomal protein L10 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K7S4_FISSO)

HSP 1 Score: 112 bits (280), Expect = 1.550e-26
Identity = 64/160 (40.00%), Postives = 91/160 (56.88%), Query Frame = 0
Query:   45 GTGYASSRAGKAKAVEEVSDLLRKSSLVFATPVAYLSANEVVQLRLNIPEGCTARVVKNKLMRIAAKDTDFEEVCEMTTGGNFWIFVESEDNLAVPIKYIQDFAKRMDPKEKIGWDQPFRGGVFDKKLVDGPGVIAISKLPTKHELYQRIAVALNLIPTK 204
            G+G A+S  GK   V+ V  LL+ S +VF  P + ++  E+ +LR ++PEG T +VVKN LM  A + TD+E    + TG N W F+E  D+++  IK    F K    K+      P  GGV +    D  GV AI KLP+K ELY +IA ++  +PTK
Sbjct:   38 GSGVATSLEGKKSTVQTVKGLLQDSEMVFTIPASSITVAEMQKLRRSMPEGTTVKVVKNTLMERAVEGTDYEVATSLLTGANLWFFIE--DDISATIKAYNGFLKDCGKKDT----HPILGGVTEGISYDTKGVEAIGKLPSKQELYAKIAGSIKAVPTK 191          
BLAST of mRNA_F-serratus_M_contig1002.139.1 vs. uniprot
Match: A0A5J4Z5L2_PORPP (50S ribosomal protein L10 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z5L2_PORPP)

HSP 1 Score: 107 bits (268), Expect = 8.690e-25
Identity = 59/157 (37.58%), Postives = 94/157 (59.87%), Query Frame = 0
Query:   55 KAKAVEEVSDLLRKSSLVFATPVAYLSANEVVQLRLNIPEGCTARVVKNKLMRIAAKDTDF---EEVCEMTTGGNFWIFVESEDNLAVPIKYIQDFAKRMDPKEKIGWDQPFRGGVFDKKLVDGPGVIAISKLPTKHELYQRIAVALNLIPTKIGRS 208
            K+K V EVS  +++S++V + P+  L+  +V +L+  +PEG T R VKN +++ A  DT++   E   E+T G N W+F+  E+++   ++ I  F K      K        GGVF  +  D  G++A+SKLPTK ELYQ+IAV +N + TK+ R+
Sbjct:   43 KSKLVSEVSATMQQSTMVLSLPLEGLTVKQVNELKAAVPEGVTVRCVKNTIVKRAVADTEYSVLESGSELTKGHNLWVFIP-EESVRGTVEGITGFLKT----SKKADTNAINGGVFGGEAYDADGIVALSKLPTKQELYQQIAVGINQVNTKVARA 194          
BLAST of mRNA_F-serratus_M_contig1002.139.1 vs. uniprot
Match: B7G672_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G672_PHATC)

HSP 1 Score: 102 bits (255), Expect = 3.090e-23
Identity = 57/158 (36.08%), Postives = 83/158 (52.53%), Query Frame = 0
Query:   47 GYASSRAGKAKAVEEVSDLLRKSSLVFATPVAYLSANEVVQLRLNIPEGCTARVVKNKLMRIAAKDTDFEEVCEMTTGGNFWIFVESEDNLAVPIKYIQDFAKRMDPKEKIGWDQPFRGGVFDKKLVDGPGVIAISKLPTKHELYQRIAVALNLIPTK 204
            GYA+S  GK   V +V  LL  S +VF  P   ++  +   LR ++P G T ++VKNKLM  A + TD+     +  G N W F+E  +++   +K    F K    +E      P  GGV +    D  GV AI KLP+K +LY +IA ++  +PTK
Sbjct:    6 GYATSLEGKKNTVTKVQSLLDSSQMVFTIPAGSITVAQTQALRRSMPSGTTVQIVKNKLMARAVEGTDYAVATSLLQGANAWFFIE--EDIGGTLKAYNAFLKNFGKRES----HPILGGVIEGNTYDAAGVEAIGKLPSKQDLYAKIAGSIKAVPTK 157          
BLAST of mRNA_F-serratus_M_contig1002.139.1 vs. uniprot
Match: A0A7S1E238_9STRA (Hypothetical protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E238_9STRA)

HSP 1 Score: 103 bits (256), Expect = 4.710e-23
Identity = 60/158 (37.97%), Postives = 84/158 (53.16%), Query Frame = 0
Query:   47 GYASSRAGKAKAVEEVSDLLRKSSLVFATPVAYLSANEVVQLRLNIPEGCTARVVKNKLMRIAAKDTDFEEVCEMTTGGNFWIFVESEDNLAVPIKYIQDFAKRMDPKEKIGWDQPFRGGVFDKKLVDGPGVIAISKLPTKHELYQRIAVALNLIPTK 204
            G AS+  GK + V ++  L+  S +VF  P   ++ ++   LR ++PEG TA VVKN LM  A   TD+E   E+  G + W F+E  D++   IK    F K  D  E  G      GGV +  L D  GV  I  LP+K ELY +IA ++  +PTK
Sbjct:   38 GRASTLEGKKEKVAQIQSLIDTSQMVFTVPAGSITVSQSEILRRSLPEGTTAAVVKNTLMERAVSGTDYETAAELLKGPHMWFFIE--DDIGASIKAYNGFIKENDLMESHG----IIGGVIESTLYDADGVKQIGNLPSKLELYAKIAGSIKAVPTK 189          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1002.139.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTB2_ECTSI3.800e-6152.0350S ribosomal protein L10 n=2 Tax=Ectocarpus TaxID... [more]
A0A0G4GLP8_VITBC1.570e-3143.87Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A448Z550_9STRA1.380e-2842.33Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S3LDP0_9STRA2.250e-2839.75Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A835YRM7_9STRA5.100e-2742.86Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2ZLQ0_9RHOD1.380e-2642.86Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A1Z5K7S4_FISSO1.550e-2640.00Large subunit ribosomal protein L10 n=2 Tax=Fistul... [more]
A0A5J4Z5L2_PORPP8.690e-2537.5850S ribosomal protein L10 n=1 Tax=Porphyridium pur... [more]
B7G672_PHATC3.090e-2336.08Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S1E238_9STRA4.710e-2337.97Hypothetical protein n=1 Tax=Thalassionema nitzsch... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001790Ribosomal protein L10PPFAMPF00466Ribosomal_L10coord: 51..149
e-value: 1.9E-15
score: 56.8
IPR001790Ribosomal protein L10PPANTHERPTHR11560FAMILY NOT NAMEDcoord: 32..221
NoneNo IPR availableGENE3D3.30.70.1730coord: 50..184
e-value: 1.1E-24
score: 89.1
NoneNo IPR availablePANTHERPTHR11560:SF839S RIBOSOMAL PROTEIN L10, MITOCHONDRIALcoord: 32..221
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..270
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 13..17
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..17
score: 0.78
NoneNo IPR availableSUPERFAMILY160369Ribosomal protein L10-likecoord: 52..221

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1002contigF-serratus_M_contig1002:248774..261958 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1002.139.1mRNA_F-serratus_M_contig1002.139.1Fucus serratus malemRNAF-serratus_M_contig1002 248374..262207 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1002.139.1 ID=prot_F-serratus_M_contig1002.139.1|Name=mRNA_F-serratus_M_contig1002.139.1|organism=Fucus serratus male|type=polypeptide|length=271bp
MRAILILIAFYVSGAQAFFGTPLRPISSSASPSRPHSCAQSRMSGTGYAS
SRAGKAKAVEEVSDLLRKSSLVFATPVAYLSANEVVQLRLNIPEGCTARV
VKNKLMRIAAKDTDFEEVCEMTTGGNFWIFVESEDNLAVPIKYIQDFAKR
MDPKEKIGWDQPFRGGVFDKKLVDGPGVIAISKLPTKHELYQRIAVALNL
IPTKIGRSIKLVPTKVGRAVKLAFAEEGEGGDGSEGAAAEEAPAAAEAAT
PEGEAAADPPVAAEEVPATE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001790Ribosomal_L10P