mRNA_F-serratus_M_contig1002.129.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1002.129.1 vs. uniprot
Match: A0A0L9UDJ6_PHAAN (Uncharacterized protein n=1 Tax=Phaseolus angularis TaxID=3914 RepID=A0A0L9UDJ6_PHAAN) HSP 1 Score: 132 bits (331), Expect = 1.110e-34 Identity = 74/104 (71.15%), Postives = 76/104 (73.08%), Query Frame = 1 Query: 1 MGGGAWPFLVGGVICLVNSVNERDPRLLNSGAYVCDALRCPGPHARYTDACNEFSISLGR---KVRSSARIDYVPALCTHRPSHLPIECFGEDSGPELE-RFAA 300 MGGGAWPFLVGG ICLVNSVNERD LLNS VCDALRC GPHARYT NE SI+L K SSAR+DYVPALCTHRPS LPIE GE G RFAA Sbjct: 1 MGGGAWPFLVGGAICLVNSVNERDLSLLNSYVEVCDALRCSGPHARYTYVFNE-SIALADRPGKRESSARVDYVPALCTHRPSLLPIEWSGEVLGLRRRGRFAA 103
BLAST of mRNA_F-serratus_M_contig1002.129.1 vs. uniprot
Match: A0A6A5L3Q3_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5L3Q3_LUPAL) HSP 1 Score: 123 bits (309), Expect = 2.480e-33 Identity = 65/93 (69.89%), Postives = 70/93 (75.27%), Query Frame = 1 Query: 1 MGGGAWPFLVGGVICLVNSVNERDPRLLNSGAYVCDALRCPGPHARYTDACNEFSISLGR---KVRSSARIDYVPALCTHRPS----HLPIEC 258 MGGGAWPFLVGG ICLVNSVNERD LL S VCDALRC GPHARYTD NE SI+L K SSAR+DYVPALCTHRPS + P++C Sbjct: 1 MGGGAWPFLVGGAICLVNSVNERDLSLLTSYVEVCDALRCSGPHARYTDVFNE-SIALADRPGKRESSARVDYVPALCTHRPSLYRLNGPVKC 92
BLAST of mRNA_F-serratus_M_contig1002.129.1 vs. uniprot
Match: A0A6A5L666_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5L666_LUPAL) HSP 1 Score: 101 bits (252), Expect = 1.220e-24 Identity = 60/102 (58.82%), Postives = 67/102 (65.69%), Query Frame = 1 Query: 1 MGGGAWPFLVGGVICLVNSVNERDPRLLNSGAYVCDALRCPGPHARYTDACNEFSISLGRKVRSSARIDYVPALCTHRP-SHLPIECFGEDSGPELE-RFAA 300 MGGGAWPFLVGG ICLVNSVNERD LL S VCDALRC GPHARYTD NE SI+L + +S ++ + + P S LPIE GE G RFAA Sbjct: 1 MGGGAWPFLVGGAICLVNSVNERDLSLLTSYVEVCDALRCSGPHARYTDVFNE-SIALADRPGASHQLALTTSCPLYTPPSLLPIEWSGEVFGLRRRGRFAA 101
BLAST of mRNA_F-serratus_M_contig1002.129.1 vs. uniprot
Match: A0A6A5L6D6_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5L6D6_LUPAL) HSP 1 Score: 95.5 bits (236), Expect = 1.920e-22 Identity = 53/98 (54.08%), Postives = 58/98 (59.18%), Query Frame = 1 Query: 1 MGGGAWPFLVGGVICLVNSVNERDPRLLNSGAYVCDALRCPGPHARYTDACNEFSISLGRKVRSSARIDYVPALCTHRPSHLPIECFGEDSGPELERF 294 MGGGAWPFLVGG ICLVNSVNERD LL S VCDALRC GPHARYTD NE S+ R RI A+ R E + + G + RF Sbjct: 1 MGGGAWPFLVGGAICLVNSVNERDLSLLTSYVEVCDALRCSGPHARYTDVFNE---SIALADRPGVRIAATWAVRCRRRCEKSTEPYHLEEGEVVTRF 95
BLAST of mRNA_F-serratus_M_contig1002.129.1 vs. uniprot
Match: A0A8D9DBA2_BRACM ((field mustard) hypothetical protein n=1 Tax=Brassica campestris TaxID=3711 RepID=A0A8D9DBA2_BRACM) HSP 1 Score: 95.5 bits (236), Expect = 2.690e-22 Identity = 53/92 (57.61%), Postives = 63/92 (68.48%), Query Frame = 1 Query: 1 MGGGAWPFLVGGVICLVNSVNERDPRLLNSGAYVCDALRCPGPHARYTDACNEFSISLGRKVRSSARI---DYVPALCTHRPSHL---PIEC 258 MGGGAWPFLVGG ICLVNSVNERD LL S YVCDALRC GPHARYTD NEF+ L + +S ++ +P + T R S+ P++C Sbjct: 1 MGGGAWPFLVGGEICLVNSVNERDLSLLTS--YVCDALRCSGPHARYTDVFNEFTPWLTGPLSASHQLMLTTSLPFVHTARHSYRLNDPVKC 90
BLAST of mRNA_F-serratus_M_contig1002.129.1 vs. uniprot
Match: A0A0R0GQW8_SOYBN (Uncharacterized protein n=6 Tax=rosids TaxID=71275 RepID=A0A0R0GQW8_SOYBN) HSP 1 Score: 94.7 bits (234), Expect = 4.180e-22 Identity = 58/103 (56.31%), Postives = 61/103 (59.22%), Query Frame = 1 Query: 1 MGGGAWPFLVGGVICLVNSVNERDPRLLNSGAYVCDALRCPGPHARYTDACNEFSISLG--RKVRSSARIDYVPALCTHRPSHLPIECFGEDSG-PELERFAA 300 MGGGAWPFLVGG ICLVNSVNERD LLNS Y + + G K SSAR+DYVPALCTHRPS LPIE GE G ERFAA Sbjct: 1 MGGGAWPFLVGGAICLVNSVNERDLSLLNS----------------YVEIIAIVGLQRGIPSKRESSARVDYVPALCTHRPSLLPIEWSGEVFGLRRRERFAA 87
BLAST of mRNA_F-serratus_M_contig1002.129.1 vs. uniprot
Match: A0A0D2ZQ56_BRAOL (Uncharacterized protein n=1 Tax=Brassica oleracea var. oleracea TaxID=109376 RepID=A0A0D2ZQ56_BRAOL) HSP 1 Score: 95.9 bits (237), Expect = 6.670e-22 Identity = 52/94 (55.32%), Postives = 61/94 (64.89%), Query Frame = 1 Query: 1 MGGGAWPFLVGGVICLVNSVNERDPRLLNSGAYVCDALRCPGPHARYTDACNEFS------ISLGRKVRSSARIDYVPALCTHRPSHL--PIEC 258 MGGGAWPFLVGG ICLVNSVNERD LL S YVCDALRC GPHARYTD NEF+ +S ++ + + +V RP L P++C Sbjct: 1 MGGGAWPFLVGGAICLVNSVNERDLSLLTS--YVCDALRCSGPHARYTDVFNEFTPWPTGPVSASHQLALTTSLPFVHTA--RRPYRLNDPVKC 90
BLAST of mRNA_F-serratus_M_contig1002.129.1 vs. uniprot
Match: A0A835JQG9_9ROSI (Uncharacterized protein n=1 Tax=Salix dunnii TaxID=1413687 RepID=A0A835JQG9_9ROSI) HSP 1 Score: 97.8 bits (242), Expect = 7.860e-22 Identity = 61/113 (53.98%), Postives = 69/113 (61.06%), Query Frame = 1 Query: 1 MGGGAWPFLVGGVICLVNSVNERDPRLLNSGAYVCDALRCPGPHARYTDACNEFSISL-----GRKVRSSARIDYVPA---LCTHRPSHLPIECFGEDSGPELERFAAH-WRR 312 MGGGAWPFLVGG IC+VNSVNERD LL S A VCDALRC GPHARYTD NE SI+L GR+ R+ + PA L P+ P + + G RFA WRR Sbjct: 1 MGGGAWPFLVGGAICVVNSVNERDLSLLTSYAEVCDALRCSGPHARYTDVFNE-SIALADRPGGRRSRNKVSVGE-PAEGSLSKPAPAERPANPWHDKPGSGGTRFAQRAWRR 111
BLAST of mRNA_F-serratus_M_contig1002.129.1 vs. uniprot
Match: A0A5N6NFM9_9ASTR (Uncharacterized protein n=2 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6NFM9_9ASTR) HSP 1 Score: 93.2 bits (230), Expect = 2.670e-21 Identity = 45/64 (70.31%), Postives = 48/64 (75.00%), Query Frame = 1 Query: 1 MGGGAWPFLVGGVICLVNSVNERDPRLLNSGAYVCDALRCPGPHARYTDACNEFSISLGRKVRS 192 MGGGAWPFLVGG ICLVNSVNE+D LL S A VCDALRC GPHARYTD NE+ R +S Sbjct: 1 MGGGAWPFLVGGAICLVNSVNEQDLSLLTSYAEVCDALRCSGPHARYTDVFNEYIALADRPGKS 64
BLAST of mRNA_F-serratus_M_contig1002.129.1 vs. uniprot
Match: A0A2P5W4F7_GOSBA (Uncharacterized protein n=1 Tax=Gossypium barbadense TaxID=3634 RepID=A0A2P5W4F7_GOSBA) HSP 1 Score: 92.4 bits (228), Expect = 6.640e-21 Identity = 46/64 (71.88%), Postives = 46/64 (71.88%), Query Frame = 1 Query: 1 MGGGAWPFLVGGVICLVNSVNERDPRLLNSGAYVCDALRCPGPHARYTDACNEFSISLGRKVRS 192 MGGGAWPFLVGG ICLVNSVNERD LL S VCDALRC GPHARYTD NE R RS Sbjct: 1 MGGGAWPFLVGGAICLVNSVNERDLSLLTSYTEVCDALRCSGPHARYTDVFNESIALADRPGRS 64 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1002.129.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1002.129.1 >prot_F-serratus_M_contig1002.129.1 ID=prot_F-serratus_M_contig1002.129.1|Name=mRNA_F-serratus_M_contig1002.129.1|organism=Fucus serratus male|type=polypeptide|length=157bp MGGGAWPFLVGGVICLVNSVNERDPRLLNSGAYVCDALRCPGPHARYTDAback to top mRNA from alignment at F-serratus_M_contig1002:35104..36231+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1002.129.1 ID=mRNA_F-serratus_M_contig1002.129.1|Name=mRNA_F-serratus_M_contig1002.129.1|organism=Fucus serratus male|type=mRNA|length=1128bp|location=Sequence derived from alignment at F-serratus_M_contig1002:35104..36231+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1002:35104..36231+ >mRNA_F-serratus_M_contig1002.129.1 ID=mRNA_F-serratus_M_contig1002.129.1|Name=mRNA_F-serratus_M_contig1002.129.1|organism=Fucus serratus male|type=CDS|length=942bp|location=Sequence derived from alignment at F-serratus_M_contig1002:35104..36231+ (Fucus serratus male)back to top |