mRNA_F-serratus_M_contig1002.129.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1002.129.1 vs. uniprot
Match: A0A6A5L9S0_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5L9S0_LUPAL) HSP 1 Score: 90.1 bits (222), Expect = 1.840e-19 Identity = 56/103 (54.37%), Postives = 59/103 (57.28%), Query Frame = 1 Query: 1 MGGGAWPFLVGGVICLVNSVNERDPRLLNSGAYVCDALRCPGPHARYTDACNEFSISLG--RKVRSSARIDYVPALCTHRPSHLPIECFGEDSGPELE-RFAA 300 MGGGAWPFLVGG ICLVNSVNERD LL S Y + + G K SSAR+DYVPALCTHRPS LPIE GE G RFAA Sbjct: 1 MGGGAWPFLVGGAICLVNSVNERDLSLLTS----------------YVEIIAIVGLQRGIPSKRESSARVDYVPALCTHRPSLLPIEWSGEVFGLRRRGRFAA 87
BLAST of mRNA_F-serratus_M_contig1002.129.1 vs. uniprot
Match: A0A6A5P2T9_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5P2T9_LUPAL) HSP 1 Score: 90.1 bits (222), Expect = 1.980e-19 Identity = 56/103 (54.37%), Postives = 59/103 (57.28%), Query Frame = 1 Query: 1 MGGGAWPFLVGGVICLVNSVNERDPRLLNSGAYVCDALRCPGPHARYTDACNEFSISLG--RKVRSSARIDYVPALCTHRPSHLPIECFGEDSGPELE-RFAA 300 MGGGAWPFLVGG ICLVNSVNERD LL S Y + + G K SSAR+DYVPALCTHRPS LPIE GE G RFAA Sbjct: 1 MGGGAWPFLVGGAICLVNSVNERDLSLLTS----------------YVEIIAIVGLQRGIPSKRESSARVDYVPALCTHRPSLLPIEWSGEVFGLRRRGRFAA 87
BLAST of mRNA_F-serratus_M_contig1002.129.1 vs. uniprot
Match: A0A4U5NR15_POPAL (Uncharacterized protein n=1 Tax=Populus alba TaxID=43335 RepID=A0A4U5NR15_POPAL) HSP 1 Score: 89.0 bits (219), Expect = 2.990e-19 Identity = 62/109 (56.88%), Postives = 64/109 (58.72%), Query Frame = 1 Query: 1 MGGGAWPFLVGGVICLVNSVNERDPRLLNSGAYVCDALRCPGPHARYTDACNEFSI--------SLGRKVRSSARIDYVPALCTHRPSHLPIECFGEDSGPELE-RFAA 300 MGGGAW FLVGGVICLVNSVNERD LL S A V LR G R T A I + K SSAR+DYVPALCTHRPS L IE GE G RFAA Sbjct: 1 MGGGAWSFLVGGVICLVNSVNERDLSLLTSYAEV--TLR--GQLLRGTMAFQAKEIIAIVGLQRGIPSKRESSARVDYVPALCTHRPSLLQIEWSGELFGSRRRGRFAA 105
BLAST of mRNA_F-serratus_M_contig1002.129.1 vs. uniprot
Match: A0A8D9DEQ6_BRACM ((field mustard) hypothetical protein n=1 Tax=Brassica campestris TaxID=3711 RepID=A0A8D9DEQ6_BRACM) HSP 1 Score: 93.2 bits (230), Expect = 3.110e-19 Identity = 52/92 (56.52%), Postives = 61/92 (66.30%), Query Frame = 1 Query: 1 MGGGAWPFLVGGVICLVNSVNERDPRLLNSGAYVCDALRCPGPHARYTDACNEFSISLGRKVRSSARI---DYVPALCTHRPSHL---PIEC 258 MGGGAWP LVGG ICLVNS+NERD LL S YVCDALRC GPHARYTD NEF+ V +S ++ VP + T R S+ P++C Sbjct: 34 MGGGAWPVLVGGAICLVNSINERDLSLLTS--YVCDALRCSGPHARYTDVFNEFTPWPTGPVSASHQLVLTTSVPFVHTDRRSYRLNDPVKC 123
BLAST of mRNA_F-serratus_M_contig1002.129.1 vs. uniprot
Match: A0A6A5KZ31_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5KZ31_LUPAL) HSP 1 Score: 90.1 bits (222), Expect = 6.700e-19 Identity = 56/103 (54.37%), Postives = 59/103 (57.28%), Query Frame = 1 Query: 1 MGGGAWPFLVGGVICLVNSVNERDPRLLNSGAYVCDALRCPGPHARYTDACNEFSISLG--RKVRSSARIDYVPALCTHRPSHLPIECFGEDSGPELE-RFAA 300 MGGGAWPFLVGG ICLVNSVNERD LL S Y + + G K SSAR+DYVPALCTHRPS LPIE GE G RFAA Sbjct: 1 MGGGAWPFLVGGAICLVNSVNERDLSLLTS----------------YVEIIAIVGLQRGIPSKRESSARVDYVPALCTHRPSLLPIEWSGEVFGLRRRGRFAA 87 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1002.129.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pages
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1002.129.1 >prot_F-serratus_M_contig1002.129.1 ID=prot_F-serratus_M_contig1002.129.1|Name=mRNA_F-serratus_M_contig1002.129.1|organism=Fucus serratus male|type=polypeptide|length=157bp MGGGAWPFLVGGVICLVNSVNERDPRLLNSGAYVCDALRCPGPHARYTDAback to top mRNA from alignment at F-serratus_M_contig1002:35104..36231+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1002.129.1 ID=mRNA_F-serratus_M_contig1002.129.1|Name=mRNA_F-serratus_M_contig1002.129.1|organism=Fucus serratus male|type=mRNA|length=1128bp|location=Sequence derived from alignment at F-serratus_M_contig1002:35104..36231+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1002:35104..36231+ >mRNA_F-serratus_M_contig1002.129.1 ID=mRNA_F-serratus_M_contig1002.129.1|Name=mRNA_F-serratus_M_contig1002.129.1|organism=Fucus serratus male|type=CDS|length=942bp|location=Sequence derived from alignment at F-serratus_M_contig1002:35104..36231+ (Fucus serratus male)back to top |