mRNA_F-serratus_M_contig1002.129.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1002.129.1 vs. uniprot
Match: A0A6A5LDC5_LUPAL (Uncharacterized protein n=3 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5LDC5_LUPAL) HSP 1 Score: 90.1 bits (222), Expect = 2.650e-20 Identity = 56/103 (54.37%), Postives = 59/103 (57.28%), Query Frame = 1 Query: 1 MGGGAWPFLVGGVICLVNSVNERDPRLLNSGAYVCDALRCPGPHARYTDACNEFSISLG--RKVRSSARIDYVPALCTHRPSHLPIECFGEDSGPELE-RFAA 300 MGGGAWPFLVGG ICLVNSVNERD LL S Y + + G K SSAR+DYVPALCTHRPS LPIE GE G RFAA Sbjct: 1 MGGGAWPFLVGGAICLVNSVNERDLSLLTS----------------YVEIIAIVGLQRGIPSKRESSARVDYVPALCTHRPSLLPIEWSGEVFGLRRRGRFAA 87
BLAST of mRNA_F-serratus_M_contig1002.129.1 vs. uniprot
Match: A0A0R0GH50_SOYBN (Uncharacterized protein n=1 Tax=Glycine max TaxID=3847 RepID=A0A0R0GH50_SOYBN) HSP 1 Score: 96.3 bits (238), Expect = 3.090e-20 Identity = 65/105 (61.90%), Postives = 67/105 (63.81%), Query Frame = 1 Query: 1 MGGGAWPFLVGGVICLVNSVNERDPRLLNSGAYVCDALRCPGPHARYTDACNEFSISLGR----KVRSSARIDYVPALCTHRPSHLPIECFGEDSG-PELERFAA 300 MGGGAWPFLVGG ICLVNSVNERD LLNS YV L G R T A + L R K SSAR+DYVPALCTHRPS LPIE GE G ERFAA Sbjct: 240 MGGGAWPFLVGGAICLVNSVNERDLSLLNS--YVEVTLH--GQLLRGTMAIIAI-VGLQRGIPSKRESSARVDYVPALCTHRPSLLPIEWSGEVFGLRRRERFAA 339
BLAST of mRNA_F-serratus_M_contig1002.129.1 vs. uniprot
Match: A0A072TUX5_MEDTR (Uncharacterized protein n=1 Tax=Medicago truncatula TaxID=3880 RepID=A0A072TUX5_MEDTR) HSP 1 Score: 92.4 bits (228), Expect = 4.470e-20 Identity = 57/103 (55.34%), Postives = 60/103 (58.25%), Query Frame = 1 Query: 1 MGGGAWPFLVGGVICLVNSVNERDPRLLNSGAYVCDALRCPGPHARYTDACNEFSISLG--RKVRSSARIDYVPALCTHRPSHLPIECFGEDSGPELE-RFAA 300 MGGGAWPFLVGG ICLVNSVNERD LLNS Y + + G K SSAR+DYVPALCTHRPS LPIE GE G RFAA Sbjct: 1 MGGGAWPFLVGGAICLVNSVNERDLSLLNS----------------YVEIIAIVGLQRGIPSKRESSARVDYVPALCTHRPSLLPIEWSGEVFGLRRRGRFAA 87
BLAST of mRNA_F-serratus_M_contig1002.129.1 vs. uniprot
Match: A0A3Q7YGQ3_CICAR (uncharacterized protein LOC113787721 n=1 Tax=Cicer arietinum TaxID=3827 RepID=A0A3Q7YGQ3_CICAR) HSP 1 Score: 94.0 bits (232), Expect = 4.840e-20 Identity = 64/105 (60.95%), Postives = 66/105 (62.86%), Query Frame = 1 Query: 1 MGGGAWPFLVGGVICLVNSVNERDPRLLNSGAYVCDALRCPGPHARYTDACNEFSISLGR----KVRSSARIDYVPALCTHRPSHLPIECFGEDSGPELE-RFAA 300 MGGGAWPFLVGG ICLVNSVNERD LLNS YV L G R T A + L R K SSAR+DYVPALCTHRPS LPIE GE G RFAA Sbjct: 161 MGGGAWPFLVGGAICLVNSVNERDLSLLNS--YVEVTLH--GQLLRGTMAIIAI-VGLKRGIPSKRESSARVDYVPALCTHRPSLLPIEWSGEVFGLRRRGRFAA 260
BLAST of mRNA_F-serratus_M_contig1002.129.1 vs. uniprot
Match: A0A6A5P3E1_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5P3E1_LUPAL) HSP 1 Score: 90.1 bits (222), Expect = 5.850e-20 Identity = 56/103 (54.37%), Postives = 59/103 (57.28%), Query Frame = 1 Query: 1 MGGGAWPFLVGGVICLVNSVNERDPRLLNSGAYVCDALRCPGPHARYTDACNEFSISLG--RKVRSSARIDYVPALCTHRPSHLPIECFGEDSGPELE-RFAA 300 MGGGAWPFLVGG ICLVNSVNERD LL S Y + + G K SSAR+DYVPALCTHRPS LPIE GE G RFAA Sbjct: 1 MGGGAWPFLVGGAICLVNSVNERDLSLLTS----------------YVEIIAIVGLQRGIPSKRESSARVDYVPALCTHRPSLLPIEWSGEVFGLRRRGRFAA 87
BLAST of mRNA_F-serratus_M_contig1002.129.1 vs. uniprot
Match: A0A6A5P324_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5P324_LUPAL) HSP 1 Score: 90.1 bits (222), Expect = 1.100e-19 Identity = 56/103 (54.37%), Postives = 59/103 (57.28%), Query Frame = 1 Query: 1 MGGGAWPFLVGGVICLVNSVNERDPRLLNSGAYVCDALRCPGPHARYTDACNEFSISLG--RKVRSSARIDYVPALCTHRPSHLPIECFGEDSGPELE-RFAA 300 MGGGAWPFLVGG ICLVNSVNERD LL S Y + + G K SSAR+DYVPALCTHRPS LPIE GE G RFAA Sbjct: 1 MGGGAWPFLVGGAICLVNSVNERDLSLLTS----------------YVEIIAIVGLQRGIPSKRESSARVDYVPALCTHRPSLLPIEWSGEVFGLRRRGRFAA 87
BLAST of mRNA_F-serratus_M_contig1002.129.1 vs. uniprot
Match: A0A835J4A1_9ROSI (Uncharacterized protein n=1 Tax=Salix dunnii TaxID=1413687 RepID=A0A835J4A1_9ROSI) HSP 1 Score: 92.0 bits (227), Expect = 1.390e-19 Identity = 49/73 (67.12%), Postives = 53/73 (72.60%), Query Frame = 1 Query: 1 MGGGAWPFLVGGVICLVNSVNERDPRLLNSGAYVCDALRCPGPHARYTDACNEFSISL-----GRKVRSSARI 204 MGGGAW FLVGG ICLVNSVNERD LL S A VCDALRC GPHARYTD NE SI+L GR+ R+ + Sbjct: 1 MGGGAWSFLVGGAICLVNSVNERDLSLLTSYAEVCDALRCSGPHARYTDVFNE-SIALADRPGGRRSRNKVSV 72
BLAST of mRNA_F-serratus_M_contig1002.129.1 vs. uniprot
Match: A0A0A0LPG1_CUCSA (Uncharacterized protein n=1 Tax=Cucumis sativus TaxID=3659 RepID=A0A0A0LPG1_CUCSA) HSP 1 Score: 90.9 bits (224), Expect = 1.420e-19 Identity = 52/92 (56.52%), Postives = 55/92 (59.78%), Query Frame = 1 Query: 1 MGGGAWPFLVGGVICLVNSVNERDPRLLNSGAYVCDALRCPGPHARYTDACNEFSISLGRKVRSSARIDYVPALCTHRPSHLPIECFGEDSG 276 MGGGAWPFLVGG ICLVNSVNERD LL S A + A + K SSAR+DYVPALCTHRPS LPIE GE G Sbjct: 1 MGGGAWPFLVGGAICLVNSVNERDLSLLTSYAEII--------------AIVGLQRGIPSKRESSARVDYVPALCTHRPSLLPIEWSGEVFG 78
BLAST of mRNA_F-serratus_M_contig1002.129.1 vs. uniprot
Match: A0A6A5L9L7_LUPAL (Uncharacterized protein n=1 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5L9L7_LUPAL) HSP 1 Score: 92.4 bits (228), Expect = 1.730e-19 Identity = 47/64 (73.44%), Postives = 49/64 (76.56%), Query Frame = 1 Query: 1 MGGGAWPFLVGGVICLVNSVNERDPRLLNSGAYVCDALRCPGPHARYTDACNEFSISLGRKVRS 192 MGGGAWPFLVGG ICLVNSVNERD LL S VCDALRC GPHARYTD NE SI+L + S Sbjct: 1 MGGGAWPFLVGGAICLVNSVNERDLSLLTSYVEVCDALRCSGPHARYTDVFNE-SIALADRPGS 63
BLAST of mRNA_F-serratus_M_contig1002.129.1 vs. uniprot
Match: A0A6P5WYZ9_DURZI (uncharacterized protein LOC111278348 n=1 Tax=Durio zibethinus TaxID=66656 RepID=A0A6P5WYZ9_DURZI) HSP 1 Score: 92.4 bits (228), Expect = 1.760e-19 Identity = 53/96 (55.21%), Postives = 59/96 (61.46%), Query Frame = 1 Query: 1 MGGGAWPFLVGGVICLVNSVNERDPRLLNSGAYVCDALRCPGPHARYTDACNEF--------SISLGRK-VRSSARIDYVPAL--CTHRPSHLPIE 255 MGGGAWPFLVG ICLVNS+NERD LL S A VCDALRC GPHARYTD NE S+S R VR+ R++ P C RP P + Sbjct: 1 MGGGAWPFLVGITICLVNSINERDLNLLTSYAEVCDALRCSGPHARYTDVFNESIAWADRVGSLSKPRSTVRTRGRVNETPRGRGCPPRPEPPPAQ 96 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1002.129.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1002.129.1 >prot_F-serratus_M_contig1002.129.1 ID=prot_F-serratus_M_contig1002.129.1|Name=mRNA_F-serratus_M_contig1002.129.1|organism=Fucus serratus male|type=polypeptide|length=157bp MGGGAWPFLVGGVICLVNSVNERDPRLLNSGAYVCDALRCPGPHARYTDAback to top mRNA from alignment at F-serratus_M_contig1002:35104..36231+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1002.129.1 ID=mRNA_F-serratus_M_contig1002.129.1|Name=mRNA_F-serratus_M_contig1002.129.1|organism=Fucus serratus male|type=mRNA|length=1128bp|location=Sequence derived from alignment at F-serratus_M_contig1002:35104..36231+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1002:35104..36231+ >mRNA_F-serratus_M_contig1002.129.1 ID=mRNA_F-serratus_M_contig1002.129.1|Name=mRNA_F-serratus_M_contig1002.129.1|organism=Fucus serratus male|type=CDS|length=942bp|location=Sequence derived from alignment at F-serratus_M_contig1002:35104..36231+ (Fucus serratus male)back to top |