mRNA_F-serratus_M_contig10.80.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig10.80.1 vs. uniprot
Match: D8LCC9_ECTSI (DUF547 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCC9_ECTSI) HSP 1 Score: 389 bits (999), Expect = 3.100e-129 Identity = 187/263 (71.10%), Postives = 222/263 (84.41%), Query Frame = 1 Query: 220 TSTPDYGAWDAIVQKHLKPTVIRGIPLNSVDYQAVRDDPNFDTFVKSLETAQVSGLGKDAEYALWINSYNALAIKMVLDNPCKKAMMSSKKTPIASVKEIGSLVSPVWKKQAGVVGGQTLSLDDIENLKLRAPADYPADPLLHACIVCASVSCPDIALKGFMPETLKDDMEASMRSFLANTKKGLSLNKDAKSITLSKIFQWFAGDF--KIGHATVLDALLPYMPDDVRPYVADNKAELKVEYFDYDWGLNGPNPGAPGKGGK 1002 +S PDY AWD++V+ H+K + IRGIPLN VDYQ VRDDPNF+TFV+SL+ A SGLGKDAEYALWIN+YNALAIKMV DNPCKK + +K+ I S+K+IGS+V+PVWKK AGVVGG+TL+LDD+EN+KLR P DYPADPLLHACIVCASVSCPD+AL + PETL+ DMEA+MR FL N KKGLSL+K I LSKIFQWF GDF KIG +VLDALLPYMP+DVR YV++NK LKV++F+YDWG+NG +PGAPGKGGK Sbjct: 41 SSAPDYAAWDSVVKAHVKTSEIRGIPLNVVDYQGVRDDPNFETFVESLKNAPTSGLGKDAEYALWINTYNALAIKMVTDNPCKKRLFRTKR--ITSIKDIGSVVAPVWKKPAGVVGGETLALDDVENVKLRDPKDYPADPLLHACIVCASVSCPDVALTAYKPETLQADMEANMRLFLTNPKKGLSLDKAKGVIKLSKIFQWFEGDFTTKIGKDSVLDALLPYMPEDVRTYVSENKGSLKVDHFEYDWGVNGSSPGAPGKGGK 301
BLAST of mRNA_F-serratus_M_contig10.80.1 vs. uniprot
Match: A0A2H0MVD3_9BACT (DUF547 domain-containing protein n=1 Tax=Nitrospinae bacterium CG11_big_fil_rev_8_21_14_0_20_45_15 TaxID=1974048 RepID=A0A2H0MVD3_9BACT) HSP 1 Score: 184 bits (468), Expect = 1.280e-50 Identity = 98/246 (39.84%), Postives = 150/246 (60.98%), Query Frame = 1 Query: 232 DYGAWDAIVQKHLKPTVIRGIPLNSVDYQAVRDDPNFDTFVKSLETAQVSGLGKDAEY-ALWINSYNALAIKMVLDNPCKKAMMSSKKTPIASVKEIGSLVSPVWKKQAGVVGGQTLSLDDIENLKLRAPADYPADPLLHACIVCASVSCPDIALKGFMPETLKDDMEASMRSFLANTKKGLSLNKDAKSITLSKIFQWFAGDFKIGHATVLDALLPYMPDDVRPYVADNKAELKVEYFDYDWGLN 966 D+ WD+I+++++ +IR IPLN +DY+ ++ + ++ LE +S L K E A WIN YN LA+KMVLD+ P+ S+K+IGS+ VWK+ AG V G+ +L+DIE+ LR + P +HA IVCASVSCPD++ F+PETL ++ M+ F+ N+ KGL ++++ K + LS IF+WFA DFK VL + Y+ + ++ N+ + ++ YFDYDWGLN Sbjct: 39 DFSEWDSILKENVSTKIIREIPLNVLDYKKLKYNSQLKNLLQRLENTDISNLKKREEVLAFWINVYNILAVKMVLDH-----------YPVKSIKDIGSIFRSVWKRPAGKVAGEERTLNDIEHEILRKMGE----PRIHAAIVCASVSCPDLSKTVFVPETLDAQLDWQMKVFVHNSAKGLVIDREGKRVQLSAIFKWFAEDFK-SKGGVLSFVGAYLSPEDNKFI--NRPDTEISYFDYDWGLN 266
BLAST of mRNA_F-serratus_M_contig10.80.1 vs. uniprot
Match: A0A350UX17_9BACT (DUF547 domain-containing protein n=2 Tax=Nitrospinae TaxID=1293497 RepID=A0A350UX17_9BACT) HSP 1 Score: 182 bits (462), Expect = 3.780e-50 Identity = 98/252 (38.89%), Postives = 143/252 (56.75%), Query Frame = 1 Query: 217 MTSTPDYGAWDAIVQKHLKPTVIRGIPLNSVDYQAVRDDPNFDTFVKSLETAQVSGLGKDAE-YALWINSYNALAIKMVLDNPCKKAMMSSKKTPIASVKEIGSLVSPVWKKQAGVVGGQTLSLDDIENLKLRAPADYPADPLLHACIVCASVSCPDIALKGFMPETLKDDMEASMRSFLANTKKGLSLNKDAKSITLSKIFQWFAGDFKIGHATVLDALLPYMPDDVRPYVADNKAELKVEYFDYDWGLNG 969 M PD+ WDA+++K++ P I G+ LN+V+Y ++ DP F V L++ + L K E A WIN YN A+KMV DN P+ S+K++GSL VWK+ AG+VGG+ +L+ IE+ LR + P +H IVCASVSCPD+A + + L + ++ MR FLAN KG+ + + K + LSKIF WF DF+ + L P D + A + + L+V Y DY+WG+NG Sbjct: 1 MAQVPDFADWDALLKKYVAPETIDGVRLNAVNYGKLKTDPAFSRLVNGLKSFSPAQLKKHEEKLAFWINVYNVFAVKMVTDN-----------YPLESIKDVGSLFKSVWKRNAGIVGGKDYTLNAIEHKILRKMNE----PRIHVAIVCASVSCPDLATDVYKADRLSEQLDVQMRKFLANPGKGMRVGTEGKKVFLSKIFDWFEDDFEPRGGVLKFIRLYVSPKDRQ---ALDNSSLRVSYMDYNWGVNG 234
BLAST of mRNA_F-serratus_M_contig10.80.1 vs. uniprot
Match: UPI001F18B1F0 (DUF547 domain-containing protein n=1 Tax=Nitrospina gracilis TaxID=35801 RepID=UPI001F18B1F0) HSP 1 Score: 182 bits (461), Expect = 5.950e-50 Identity = 98/246 (39.84%), Postives = 144/246 (58.54%), Query Frame = 1 Query: 232 DYGAWDAIVQKHLKPTVIRGIPLNSVDYQAVRDDPNFDTFVKSLETAQVSGLG-KDAEYALWINSYNALAIKMVLDNPCKKAMMSSKKTPIASVKEIGSLVSPVWKKQAGVVGGQTLSLDDIENLKLRAPADYPADPLLHACIVCASVSCPDIALKGFMPETLKDDMEASMRSFLANTKKGLSLNKDAKSITLSKIFQWFAGDFKIGHATVLDALLPYMPDDVRPYVADNKAELKVEYFDYDWGLN 966 DY AWDA+++KH+ PT + G+ LN+ Y+A+++DP F V+ E L ++ + A WIN+YN A+KMVLD+ P+ S+K+ G L VWKKQ G +GGQ ++LD+IE+ LR + P +H IVCASVSCPDI + + P+ L+ + FL N KGL ++K+ K+I LS IF WF DF+ V L PY+P+ R + D+ + +EY +Y+W LN Sbjct: 12 DYSAWDALLKKHVLPTTLDGVRLNAFPYKALKNDPAFAKVVQQFEGHSPDALKTREEKLAFWINAYNVFAVKMVLDH-----------YPVDSIKDAGGLFGSVWKKQVGTIGGQPVTLDEIEHGILRKMGE----PRIHMAIVCASVSCPDIRKEAYWPDRLEQQLTDQAEHFLMNPGKGLRVDKERKTIYLSSIFDWFKEDFE-AKGGVRAYLAPYVPERHRAALKDSGYD--IEYMNYNWKLN 239
BLAST of mRNA_F-serratus_M_contig10.80.1 vs. uniprot
Match: A0A523NRH9_9BACT (DUF547 domain-containing protein n=2 Tax=Nitrospina sp. TaxID=2024844 RepID=A0A523NRH9_9BACT) HSP 1 Score: 181 bits (459), Expect = 2.800e-49 Identity = 95/246 (38.62%), Postives = 145/246 (58.94%), Query Frame = 1 Query: 232 DYGAWDAIVQKHLKPTVIRGIPLNSVDYQAVRDDPNFDTFVKSLETAQVSGLG-KDAEYALWINSYNALAIKMVLDNPCKKAMMSSKKTPIASVKEIGSLVSPVWKKQAGVVGGQTLSLDDIENLKLRAPADYPADPLLHACIVCASVSCPDIALKGFMPETLKDDMEASMRSFLANTKKGLSLNKDAKSITLSKIFQWFAGDFKIGHATVLDALLPYMPDDVRPYVADNKAELKVEYFDYDWGLN 966 D+ WDA+++KH++PT + G+ LN++DY VR DP F V +L++ + L ++ + A WIN YN +A+KMVLD+ P+ +K+ GSL VW++ AG VGG+ +SL+DIE+ LR + P +H IVCASVSCPD+ + + ETL + + FL N KG+ L+ + + LSKIF WF GDF+ VL+ + Y P ++ + + +LK+ Y DY+W LN Sbjct: 42 DFSGWDALLKKHVRPTTLEGVRLNALDYARVRTDPEFKKIVSALKSFPPARLKTRNQKLAFWINVYNIMAVKMVLDH-----------YPVKGIKDAGSLFQSVWEQPAGQVGGKKISLNDIEHKILRKMDE----PRMHVAIVCASVSCPDLRREAYRAETLDVQLTDQTQRFLQNWGKGMRLDSEENRLYLSKIFSWFEGDFET-QGGVLEFITTYAPASIQKDL--KRGKLKISYLDYNWNLN 269
BLAST of mRNA_F-serratus_M_contig10.80.1 vs. uniprot
Match: A0A7S1CNX3_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CNX3_9STRA) HSP 1 Score: 181 bits (459), Expect = 3.420e-49 Identity = 96/249 (38.55%), Postives = 146/249 (58.63%), Query Frame = 1 Query: 232 DYGAWDAIVQKHLKPTVIRGIPLNSVDYQAVRDDPNFDTFVKSLETAQVSGLGKDAEYALWINSYNALAIKMVLDNPCKKAMMSSKKTPIASVKEIGSLVSPVWKKQAGVVGGQTLSLDDIENLKLRAPADYPADPLLHACIVCASVSCPDIALKGFMPETLKDDMEASMRSFLANTKKGLSLNKDAKSITLSKIFQWFAGDFKIGHATVLDALLPYMPDDVRPYVADNKAELKVEYFDYDWGLNGPNP 978 DY W A+ +++ + I + VDY+ + D FD V SL TA + K+ YAL++N+YN LA+ ++ N C + + PI+S+++IG+ VW + AGVV G+ SL IE+ LR P Y D LHACIVCAS+SCPD+ + F P + M+A++ +F+ANT KG +L++ A +I LS IF W+A DF + VL + ++P ++ + + + V YFDYDW +NGP P Sbjct: 28 DYAGWTALTTEYIHEGELANITEHVVDYKGLAADARFDAVVASLATA-ATPTTKNETYALFMNAYNVLAVNTIIKNACVRPVGGGCH-PISSIRDIGNASVSVWNRPAGVVAGRQFSLQQIEDF-LRDPKPYGEDARLHACIVCASISCPDVRIGAFTPADVDAQMDAAVAAFVANTGKGAALDEGAGAIQLSPIFLWYALDFIVHEDGVLPFVAAHLPAAQGAWLRAHASAVSVSYFDYDWDVNGPVP 273
BLAST of mRNA_F-serratus_M_contig10.80.1 vs. uniprot
Match: A0A7T0G4N3_9BACT (DUF547 domain-containing protein n=1 Tax=Candidatus Nitrohelix vancouverensis TaxID=2705534 RepID=A0A7T0G4N3_9BACT) HSP 1 Score: 180 bits (457), Expect = 3.740e-49 Identity = 94/248 (37.90%), Postives = 148/248 (59.68%), Query Frame = 1 Query: 232 DYGAWDAIVQKHLKPTVIRGIPLNSVDYQAVRDDPNFDTFVKSLETAQVSGLGK-DAEYALWINSYNALAIKMVLDNPCKKAMMSSKKTPIASVKEIGSLVSPVWKKQAGVVGGQTLSLDDIENLKLRAPADYPADPLLHACIVCASVSCPDIALKGFMPETLKDDMEASMRSFLANTKKGLSLNKDAKSITLSKIFQWFAGDF--KIGHATVLDALLPYMPDDVRPYVADNKAELKVEYFDYDWGLN 966 D+ WD I+++ +KP IRGI L +VDY ++ D F+ + L+TA +S + + D A WIN YN LA+KM++D+ P+ S+++IGS+ VW + AG+VGG+ +L+D+E+ LR + P +H IVCASVSCPD+A++ + E+L +E FL N KKGL +++ + I +S IF+WF DF K G + A Y+P R ++ N+ ++ ++Y DYDWG+N Sbjct: 29 DFSDWDQILKQRVKPGSIRGISLYTVDYGGLKGDEKFEQLLSRLKTANLSSIKQGDPALAFWINVYNILAVKMIVDHH-----------PLDSIRDIGSIFKSVWNRPAGIVGGKEYTLNDVEHEILRKMGE----PRIHVAIVCASVSCPDLAMEAYTAESLNQQLERQTALFLGNEKKGLKIDRKQRKIYVSSIFKWFEEDFDAKGGVRAFIGA---YLPPKERSFI--NQKDVSIDYLDYDWGVN 256
BLAST of mRNA_F-serratus_M_contig10.80.1 vs. uniprot
Match: A0A2H0MJZ5_9BACT (DUF547 domain-containing protein n=1 Tax=Nitrospinae bacterium CG11_big_fil_rev_8_21_14_0_20_56_8 TaxID=1974049 RepID=A0A2H0MJZ5_9BACT) HSP 1 Score: 178 bits (451), Expect = 4.490e-48 Identity = 99/260 (38.08%), Postives = 152/260 (58.46%), Query Frame = 1 Query: 202 GLPAKMTSTP----DYGAWDAIVQKHLKPTVIRGIPLNSVDYQAVRDDPNFDTFVKSLETAQVSGL-GKDAEYALWINSYNALAIKMVLDNPCKKAMMSSKKTPIASVKEIGSLVSPVWKKQAGVVGGQTLSLDDIENLKLRAPADYPADPLLHACIVCASVSCPDIALKGFMPETLKDDMEASMRSFLANTKKGLSLNKDAKSITLSKIFQWFAGDFKIGHATVLDALLPYMPDDVRPYVADNKAELKVEYFDYDWGLN 966 GL + S+P D+ WD ++++++ + G+ L++VDY+ V+ DP F V+ L++A V+ L ++ + A WIN YN LA+KM+LDN P+ S+K+ GSL SPVW K AG V G +L ++E+ LR + P +H IVCASVSCPD+A + ++PE L D ++ MR+FL KG+ L+ + + LS IF+WF DF+ VL L PY+ + R + N E++V Y DY+W +N Sbjct: 32 GLVFILASSPVAAFDFTDWDGMLKRYVSERTLDGVRLSAVDYRKVKADPAFSHLVERLKSADVAQLKSREDKLAFWINVYNILAVKMILDN-----------YPLQSIKDAGSLFSPVWDKPAGEVAGVGRTLAEVEHGILRKMGE----PRIHVAIVCASVSCPDLAREAYLPEKLGDQLDRQMRAFLREPGKGMRLDAAGRRVFLSSIFKWFEDDFE-AKGGVLPFLRPYVSPEERKLL--NDPEIRVSYLDYNWNVN 273
BLAST of mRNA_F-serratus_M_contig10.80.1 vs. uniprot
Match: A0A382J5A4_9ZZZZ (DUF547 domain-containing protein n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382J5A4_9ZZZZ) HSP 1 Score: 177 bits (448), Expect = 7.920e-48 Identity = 97/248 (39.11%), Postives = 142/248 (57.26%), Query Frame = 1 Query: 232 DYGAWDAIVQKHLKPTVIRGIPLNSVDYQAVRDDPNFDTFVKSLETAQVSGLGKDAE-YALWINSYNALAIKMVLDNPCKKAMMSSKKTPIASVKEIGSLVSPVWKKQAGVVGGQTLSLDDIENLKLRAPADYPADPLLHACIVCASVSCPDIALKGFMPETLKDDMEASMRSFLANTKKGLSLNKDAK--SITLSKIFQWFAGDFKIGHATVLDALLPYMPDDVRPYVADNKAELKVEYFDYDWGLN 966 D+ WD I++KH+KP+ + GI LN+VDY+ ++ D F K L S L + E WIN YN A+K+V DN P+ S+KE+G L + VWK +AG VGG+ SLD+IE+ LR D P +HA IVCAS+SCP++++ + E + ++ M+ FLAN KG+ ++ AK I LS IF WF DFK VL+ + PY+ + Y+ +N A+ + Y DY+W +N Sbjct: 27 DFTDWDKILKKHVKPSQLSGISLNTVDYEKLKSDSIFYRLQKKLNLFSPSDLNTEKEKLTFWINVYNIFAVKVVTDN-----------YPLRSIKEVGGLFTSVWKIKAGTVGGKKYSLDEIEHKILRKMGD----PRIHAAIVCASISCPNLSVTAYQSEMINKQLDVQMKDFLANANKGMRIDSTAKPTKIILSPIFNWFEDDFK-SSGGVLNFIKPYVLSKYK-YILEN-AKYSISYMDYNWSIN 256
BLAST of mRNA_F-serratus_M_contig10.80.1 vs. uniprot
Match: A0A0J6YZB7_9BACT (DUF547 domain-containing protein n=1 Tax=Candidatus Nitromaritima sp. SCGC AAA799-A02 TaxID=1628278 RepID=A0A0J6YZB7_9BACT) HSP 1 Score: 175 bits (443), Expect = 2.860e-47 Identity = 95/256 (37.11%), Postives = 148/256 (57.81%), Query Frame = 1 Query: 205 LPA-KMTSTPDYGAWDAIVQKHLKPTVIRGIPLNSVDYQAVRDDPNFDTFVKSLETAQVSGL-GKDAEYALWINSYNALAIKMVLDNPCKKAMMSSKKTPIASVKEIGSLVSPVWKKQAGVVGGQTLSLDDIENLKLRAPADYPADPLLHACIVCASVSCPDIALKGFMPETLKDDMEASMRSFLANTKKGLSLNKDAKSITLSKIFQWFAGDFKIGHATVLDALLPYMPDDVRPYVADNKAELKVEYFDYDWGLN 966 LPA + + D+ WD +++K++ P I GI LN+VDY ++ DP F V L+ +GL ++ + A WIN YN A+KMV+D+ P+ S++++GSL VWK+ AG++GG+ +L +IE+ LR + P +HA IVCASVSCPD+ L+ F L++ ++ M++FL N KG+ ++ +TLS IF WF GDF+ VL + PY+ R + K ++V Y DY+W +N Sbjct: 6 LPAVSLAQSFDFTEWDILLKKYVSPRTIDGIRLNAVDYGKLKTDPGFSRLVGGLKKFSPAGLKSREEKLAFWINIYNVFAVKMVVDH-----------YPLKSIRDVGSLFRSVWKRPAGIIGGREYTLHEIEHGILRKMGE----PRIHAAIVCASVSCPDLLLESFSAGKLEEQLDNQMKTFLGNPGKGMQVDAGRGRVTLSSIFDWFEGDFE-PRGGVLAFIKPYVSATARKVLG--KPGVRVSYMDYNWKVN 243 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig10.80.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig10.80.1 >prot_F-serratus_M_contig10.80.1 ID=prot_F-serratus_M_contig10.80.1|Name=mRNA_F-serratus_M_contig10.80.1|organism=Fucus serratus male|type=polypeptide|length=307bp MRTQFSKIVPGLIWFGSVYLVTTGWIRSGSVKRSSVGVGLPAKMTSTPDYback to top mRNA from alignment at F-serratus_M_contig10:668680..675021- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig10.80.1 ID=mRNA_F-serratus_M_contig10.80.1|Name=mRNA_F-serratus_M_contig10.80.1|organism=Fucus serratus male|type=mRNA|length=6342bp|location=Sequence derived from alignment at F-serratus_M_contig10:668680..675021- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig10:668680..675021- >mRNA_F-serratus_M_contig10.80.1 ID=mRNA_F-serratus_M_contig10.80.1|Name=mRNA_F-serratus_M_contig10.80.1|organism=Fucus serratus male|type=CDS|length=1842bp|location=Sequence derived from alignment at F-serratus_M_contig10:668680..675021- (Fucus serratus male)back to top |