mRNA_F-serratus_M_contig10.77.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig10.77.1 vs. uniprot
Match: D8LCD2_ECTSI (CBM_25 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCD2_ECTSI) HSP 1 Score: 447 bits (1149), Expect = 5.300e-150 Identity = 235/342 (68.71%), Postives = 277/342 (80.99%), Query Frame = 1 Query: 37 SCFRQPLSNRTPWGQ--------STVKRAGRHRGPVLMSA------TAERP--HGSVTFLPENEELAAEETVEIVYSPPRELFRDSDTLLYCGGFNGWDGEDEAITLPMIPIED-GKFRVSINIPNFARVLDFVVTDGVRYDTGPGEAFYHALVTHVIDADKTGNIITYRQESDGTLVKTGVIEKTDPLELERMMEKASKAQTDVAVGPSSA-PMVDDTIADVEKSLRQEIMVSVVEQDAVQKMRAEASVLGERLGLGNMQVNEARDAFDVFDSEEGLLAFEDVGKVLDKLGF-DELDSSQQAELIGTHVLEKRPDATSVTLMEFMYMFKALDEMDVGIDIC 1005 S RQ + WG+ S + A R+RG + + T+E+ HGSVTFLPEN+ELAAEETVEI+Y+PP LF +D+LLYCGGFNGWDGE++ +T+PM+P D G FR+SIN+PNFARVLDFVVTDGVRYDTGP FYHA+VTHV +ADK GNIITYRQE+DGTL+KTG+IEK DP ELERMM++A+KAQ A P A PMVD+T+A+VE+ LRQEI V++ EQDAVQKMRAEASVLGERLGLGNMQVNEARDAFDV D+E+GLLAFEDVGKVLDKLGF DELDS+Q AELIGTHVLEKRPDA ++TL EFMY+FKALD+MD+GIDIC Sbjct: 41 SSARQSTCESSSWGRASSLRFSSSATQAAARNRGLTSVQSASTTTTTSEQAATHGSVTFLPENDELAAEETVEIIYTPPTGLFEGADSLLYCGGFNGWDGEEDGVTMPMMPAGDEGNFRISINVPNFARVLDFVVTDGVRYDTGPEGLFYHAMVTHVREADKAGNIITYRQEADGTLIKTGMIEKVDPQELERMMDEATKAQAAAAAPPPVADPMVDETMAEVEQGLRQEITVTIDEQDAVQKMRAEASVLGERLGLGNMQVNEARDAFDVHDNEQGLLAFEDVGKVLDKLGFQDELDSAQLAELIGTHVLEKRPDADTMTLTEFMYLFKALDDMDIGIDIC 382
BLAST of mRNA_F-serratus_M_contig10.77.1 vs. uniprot
Match: A0A6H5JA90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA90_9PHAE) HSP 1 Score: 327 bits (838), Expect = 1.080e-105 Identity = 169/214 (78.97%), Postives = 191/214 (89.25%), Query Frame = 1 Query: 370 RVLDFVVTDGVRYDTGPGEAFYHALVTHVIDADKTGNIITYRQESDGTLVKTGVIEKTDPLELERMMEKASKAQTDVAVGPSSA-PMVDDTIADVEKSLRQEIMVSVVEQDAVQKMRAEASVLGERLGLGNMQVNEARDAFDVFDSEEGLLAFEDVGKVLDKLGF-DELDSSQQAELIGTHVLEKRPDATSVTLMEFMYMFKALDEMDVGIDIC 1005 +VLDFVVTDGVRYDTGP FYHA+VTHV +ADK GNIITYRQE+DGTL+KTG+IEK DP ELERMM++A+KAQ A P A PMVD+T+A+VEK LRQEI V++ EQDAVQKMRAEASVLGERLGLGNMQVNEARDAFDV D+E+GLLAFEDVGKVLDKLGF DELDS+Q AELIGTHVLEKRPDA ++TL EFMY+FKALD+MD+GIDIC Sbjct: 3 QVLDFVVTDGVRYDTGPEGLFYHAMVTHVREADKAGNIITYRQEADGTLIKTGIIEKVDPQELERMMDEATKAQAAAAAPPPVADPMVDETMAEVEKGLRQEITVTIDEQDAVQKMRAEASVLGERLGLGNMQVNEARDAFDVHDNEQGLLAFEDVGKVLDKLGFQDELDSAQLAELIGTHVLEKRPDADTMTLTEFMYLFKALDDMDIGIDIC 216
BLAST of mRNA_F-serratus_M_contig10.77.1 vs. uniprot
Match: A0A835YX15_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX15_9STRA) HSP 1 Score: 263 bits (673), Expect = 3.390e-80 Identity = 141/293 (48.12%), Postives = 190/293 (64.85%), Query Frame = 1 Query: 127 SATAERPHGSVTFLPENEELAAEETVEIVYSPPRELFRDSDTLLYCGGFNGWDGEDEAITLPMIPIEDGKFRVSINIPNFARVLDFVVTDGVRYDTGPGEAFYHALVTHVIDADKTGNIITYRQESDGTLVKTGVIEKTDPLELERMMEKASKAQTDVAVGPSSAPMVDDTIADVEKSLRQEIMVSVVEQDAVQKMRAEASVLGERLGLGNMQVNEARDAFDVFDSEE-GLLAFEDVGKVLDKLGFDELDSSQQAELIGTHVLEKRPDATSVTLMEFMYMFKALDEMDVGIDI 1002 +A + GS+ + +EL+ E+T+ + Y+PPRE FR+ L YCGG+NGWDGE+ + +P++ DG+++ SI IPNFA+ LDF VTDG+RYD GP +AFYH VTH+ + D GNI YRQ+ DGTL G+IE DP ELERM +D+ I V ++++ E + S EQ AVQ MRAEAS+LGE+LGLGNMQV+EARDAFD FD E G L E +G VLD++G LD+ + A L+ H RP+AT+V L E+M+M+ LD+ D GIDI Sbjct: 6 AAATQLGSGSIEY--SAQELSVEDTIMVHYTPPREFFREESGLFYCGGYNGWDGEETPVMVPLLRQRDGRYKASITIPNFAKTLDFTVTDGIRYDMGPDDAFYHIRVTHIREEDDAGNIRLYRQDEDGTLTYEGMIETFDPQELERM--------------------IDEGIDKVAENIKVETL-STEEQQAVQVMRAEASILGEKLGLGNMQVSEARDAFDFFDDETTGELQVEHLGLVLDRMGLT-LDADEIAGLLERHTYATRPEATTVRLSEYMHMWSELDQADTGIDI 274
BLAST of mRNA_F-serratus_M_contig10.77.1 vs. uniprot
Match: A0A7S2W5E1_9STRA (Hypothetical protein n=3 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W5E1_9STRA) HSP 1 Score: 126 bits (316), Expect = 2.010e-28 Identity = 84/285 (29.47%), Postives = 140/285 (49.12%), Query Frame = 1 Query: 151 GSVTFLPENEELAAEETVEIVYSPPRELFRDSDTLLYCGGFNGWDGEDEAITLPMIPIEDGKFRVSINIPNFARVLDFVVTDGVRYDTGPGEAFYHALVTHVIDADKTGNIITYRQESDGTLVKTGVIEKTDPLELERMMEKASKAQTDVAVGPSSAPMVDDTIADVEKSLRQEIMVSVVEQDAVQKMRAEASVLGERLGLGNMQVNEARDAFD-VFDSEEGLLAFEDVGKVLDKLGFDELDSSQQAELIGTHVLEKRPDATSVTLMEFMYMFKALDEMDVGIDI 1002 G V + ++EL+ + + + Y+P +F + L GFNGW GE++ + G+ S+ IPNFA+ + F++T+G R+DT G+ +YHA V H ++ DK GN+ DGT+ + + + D ELERM++ + T +S VD ++ DV + R +R EA + L + NMQ +E R+AF+ V ++ + +G L LG E+ EL+ H E A+ L E M++F LD+ + G++I Sbjct: 61 GRVRWQSSSDELSVGDVLTVQYTPSPTIFPITSDLELWAGFNGWKGENKPLRAAFFKDSSGRLEASVTIPNFAKTVQFIITNGYRFDTNEGQ-YYHAHVFHTLETDKNGNVFRCHHAEDGTVNRLAM-QNRDAQELERMIDHELSSVT------NSVIQVDTSVTDVLEKKRL-------------ALREEALSTAQSLRMHNMQAHEVREAFEKVQHGDDAFTGRDSIGVFLGHLGM-EVPEPTIEELVARHCEEPNEGAS---LSEAMHIFHELDQENFGLNI 320
BLAST of mRNA_F-serratus_M_contig10.77.1 vs. uniprot
Match: A0A1X6PBW0_PORUM (CBM_25 domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PBW0_PORUM) HSP 1 Score: 118 bits (296), Expect = 1.450e-25 Identity = 91/297 (30.64%), Postives = 148/297 (49.83%), Query Frame = 1 Query: 151 GSVTFLPENEELAAEETVEIVYSPPRELFRDSDTLLYCGGFNGWDGEDEAITL--PMIPIEDGKFRVSINIPNFARVLDFVVTD-----GVRYDTGPGEAFYHALVTHVIDADKTGNIITY-----RQESDGTLVKTGVIEKTDPLELERMMEKASKAQTDVAVGPSSAPMVDDTIADVEKSLRQEIMVSVVEQDAVQKMRAEASVLGERLGLGNMQVNEARDAFDVFDSE-EGLLAFEDVGKVLDKLGFDELDSSQQAELIGTHVLEKRPDATSVTLMEFMYMFKALDEMDVGIDI 1002 G+ TF P+ + ++ +T+ + Y+PP LF + D + Y GGFNGW E + L P + +G +RVS+ +PNFARVLDF GVRYD G F H V + + G + +Y +E+DGT ++G+ K D +R ++ G P++DD E+ A+ + R E++++GE GLGN+Q++ ARDAF+ D + G+L+ E + L LGF+ + + L + V K + + +FM ++ L+ D GI+I Sbjct: 76 GTFTFSPDGD-VSVGDTLSVTYTPPVGLFTEDDVVCYAGGFNGWSSETDTTPLLFPAQSLFNGSYRVSVVVPNFARVLDFAFVQDAAAGGVRYDDNSGTLF-HIPVVNQLRLTANGEVQSYVAGSEDEEADGT--RSGL--KVDG---DRGVDLTGGGGVG---GVGMGPVLDDG-----------------EEAALHRSRGESALVGEAAGLGNIQISAARDAFERLDPDMTGVLSIESSVRALVLLGFEMTEGRLRTLL--SEVGAKVGAGGGLAMSDFMLVYADLENADEGIEI 341
BLAST of mRNA_F-serratus_M_contig10.77.1 vs. uniprot
Match: W7U5L9_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U5L9_9STRA) HSP 1 Score: 119 bits (298), Expect = 2.080e-25 Identity = 104/332 (31.33%), Postives = 164/332 (49.40%), Query Frame = 1 Query: 187 AAEETVEIVYSPPRE--------LFRD---SDTLLYCGGFNGWDGEDEAITLPMIPIEDGKFRVSINIPNFARVLDFVVTDG-VRYDTGPGEAFYHALVTHVIDADKTGNIITYRQESDGTLVKTGVIEKTDPLELERMMEKASKA-QTDVAVG------PSSAPMVDDTIADVEKSLRQEIM---------VSVVEQDA-----------------------------VQKMRAEASVLGERLGLGN-MQVNEARDAFD-VFDSEEGLLAFEDVGKVLDKLGFDELDSSQQAELIGTHVLEKRPDA-TSVTLMEFMYMFKALDEMDVGIDI 1002 A +T+ IVY P E L D S LLY FNGW+GE+ + P+ P DG ++++PN+A+VLD +V+DG + +DT G+ F+H + HV + ++ G + + Q DG++ TGV D ELERM+E+ A +T A G P T+AD E+S ++ S + +DA Q++RAEA+ +GE LG+ + M +NE R++FD V D++ +L ++ K L ++GFD L++++ +L + P A +TL FM +F LD +VGI I Sbjct: 75 AVGDTLSIVYDPAGEGADSPLTMLEEDEGASPCLLY--NFNGWNGEETPLRTPLFPQGDGTLMATVHVPNYAKVLDCIVSDGQLAFDTEAGQ-FFHLRIAHVQE-ERDGTVYNFFQGEDGSITLTGVQADNDARELERMIEEELSARETSSAEGQLFDEEPEERRFSSSTVADYEESHLSDLEGDSEEAGEGKSPLSEDADAGGEAARQLASSGSLGVHVAALEDVGNVPQQLRAEATAVGEALGISSSMIINELRESFDSVTDAD--VLTIGELPKALARMGFDGLEAAELEDLCMRVQGTEAPAAGRCLTLEHFMRIFHLLDTENVGIVI 400
BLAST of mRNA_F-serratus_M_contig10.77.1 vs. uniprot
Match: M2W9F3_GALSU (Glycosyltransferase family 5 protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W9F3_GALSU) HSP 1 Score: 99.0 bits (245), Expect = 1.410e-19 Identity = 71/266 (26.69%), Postives = 121/266 (45.49%), Query Frame = 1 Query: 208 IVYSPPRELFRDSDTLLYCGGFNGWDGEDEAITLPMIPIEDGKFRVSINIPNFARVLDFVVTDGVRYDTGPGEAFYHALVTHVIDADKTGNIITYRQESDGTLVKTGVIEKTDPLELERMMEKASKAQTDVAVGPSSAPMVDDTIADVEKSLRQEIMVSVVEQDAVQKMRAEASVLGERLGLGNMQVNEARDAFDVFDSE-EGLLAFEDVGKVLDKLGFDELDSSQQAELIGTHVLEKRPDATSVTLMEFMYMFKALDEMDVGIDI 1002 I Y PP E FR L Y GG+N W G D + LP+ + + V + +P + ++F TDGV YDT G AFYH + + ++ N S+ T + + DPL ++ E ++ D E+ A++K RAEA+ +GE +GL N+ + EAR F+ FD+ G ++ E+ +++LGF+ D + + D ++ + EF+Y++ +L+ + G+ I Sbjct: 25 IQYQPPVEYFRSGQDLFYTGGYNNWSGVDNPLILPLRQKKADLYEVLVPLPEGSVSVEFAFTDGVVYDTNHG-AFYHIPLEQFV-TEEENNSHHIENVSENTKLS-----ELDPL---KIPEGPTRYTND-------------------------------EEIALRKARAEATAVGESMGLSNVLMTEARTEFERFDTRMSGWISREEAKMCIERLGFEIGDKEFHEWTLACKEYSRDEDMENIHITEFIYLYGSLELRNEGLQI 249
BLAST of mRNA_F-serratus_M_contig10.77.1 vs. uniprot
Match: A0A7S1DE67_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DE67_HEMAN) HSP 1 Score: 92.0 bits (227), Expect = 1.430e-18 Identity = 38/83 (45.78%), Postives = 55/83 (66.27%), Query Frame = 1 Query: 196 ETVEIVYSPPRELFRDSDTLLYCGGFNGWDGEDEAITLPMIPIEDGKFRVSINIPNFARVLDFVVTDGVRYDTGPGEAFYHAL 444 +TV + Y+PP LF + Y GG+NGWDGE + + +P+ P G+ R +I +PNFARV+DF +DG+R+DT G F+ AL Sbjct: 25 DTVTVTYAPPPSLFPAGSDIFYLGGWNGWDGETDPMAVPLAPCAGGRHRCTITVPNFARVVDFCFSDGLRFDTNGGAYFHMAL 107
BLAST of mRNA_F-serratus_M_contig10.77.1 vs. uniprot
Match: A0A6T6NQE4_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A6T6NQE4_9RHOD) HSP 1 Score: 66.6 bits (161), Expect = 7.270e-9 Identity = 58/242 (23.97%), Postives = 103/242 (42.56%), Query Frame = 1 Query: 283 DGEDEAITLPMIPIEDGKFRVSINIPNFARVLDFVVTDGVRYDTGPGEAFYHALVTHVIDADKTGNIITYRQESDGTLVKTGVIEKTDPLELERMMEKASKAQTDVAVGPSSAPMVDDTIADVEKSLRQEIMVSVVEQDAVQKMRAEASVLGERLGLGNMQVNEARDAFDVFDSEE-GLLAFEDVGKVLDKLGFDELDSSQQAELIGTHVLEK-RPDATSVTLMEFMYMFKALDEMDVGIDI 1002 +G+D + P DG +R+ + IPNFA+V+DF V+DG+RYDT G F+H + G I Y E+ +E+ + S T+VA ++ + + + RA A ++ ER LG++ +++A A+D D G +A +++GF E D + ++L+ K R +T +FM + L+ + ++I Sbjct: 1 NGDDVPVMTPAQLDADGAYRIVVTIPNFAQVVDFAVSDGIRYDTNDGN-FFHIPIRFQQRLGDDGEIEVYDSAD----------EEQSKVEIREFRDAHS---TNVAA------------------------ITPENEKLLHEARATADMISERFSLGSIHISQATAAYDRIDKAGVGKIAINAAILAFEEMGF-ETDKNTLSDLLNDFAEGKERTLLEELTASDFMVAYALLESDESALEI 203 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig10.77.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig10.77.1 >prot_F-serratus_M_contig10.77.1 ID=prot_F-serratus_M_contig10.77.1|Name=mRNA_F-serratus_M_contig10.77.1|organism=Fucus serratus male|type=polypeptide|length=295bp MSATAERPHGSVTFLPENEELAAEETVEIVYSPPRELFRDSDTLLYCGGFback to top mRNA from alignment at F-serratus_M_contig10:633293..637758- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig10.77.1 ID=mRNA_F-serratus_M_contig10.77.1|Name=mRNA_F-serratus_M_contig10.77.1|organism=Fucus serratus male|type=mRNA|length=4466bp|location=Sequence derived from alignment at F-serratus_M_contig10:633293..637758- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig10:633293..637758- >mRNA_F-serratus_M_contig10.77.1 ID=mRNA_F-serratus_M_contig10.77.1|Name=mRNA_F-serratus_M_contig10.77.1|organism=Fucus serratus male|type=CDS|length=1770bp|location=Sequence derived from alignment at F-serratus_M_contig10:633293..637758- (Fucus serratus male)back to top |