mRNA_F-serratus_M_contig10.77.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig10.77.1
Unique NamemRNA_F-serratus_M_contig10.77.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig10.77.1 vs. uniprot
Match: D8LCD2_ECTSI (CBM_25 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCD2_ECTSI)

HSP 1 Score: 447 bits (1149), Expect = 5.300e-150
Identity = 235/342 (68.71%), Postives = 277/342 (80.99%), Query Frame = 1
Query:   37 SCFRQPLSNRTPWGQ--------STVKRAGRHRGPVLMSA------TAERP--HGSVTFLPENEELAAEETVEIVYSPPRELFRDSDTLLYCGGFNGWDGEDEAITLPMIPIED-GKFRVSINIPNFARVLDFVVTDGVRYDTGPGEAFYHALVTHVIDADKTGNIITYRQESDGTLVKTGVIEKTDPLELERMMEKASKAQTDVAVGPSSA-PMVDDTIADVEKSLRQEIMVSVVEQDAVQKMRAEASVLGERLGLGNMQVNEARDAFDVFDSEEGLLAFEDVGKVLDKLGF-DELDSSQQAELIGTHVLEKRPDATSVTLMEFMYMFKALDEMDVGIDIC 1005
            S  RQ     + WG+        S  + A R+RG   + +      T+E+   HGSVTFLPEN+ELAAEETVEI+Y+PP  LF  +D+LLYCGGFNGWDGE++ +T+PM+P  D G FR+SIN+PNFARVLDFVVTDGVRYDTGP   FYHA+VTHV +ADK GNIITYRQE+DGTL+KTG+IEK DP ELERMM++A+KAQ   A  P  A PMVD+T+A+VE+ LRQEI V++ EQDAVQKMRAEASVLGERLGLGNMQVNEARDAFDV D+E+GLLAFEDVGKVLDKLGF DELDS+Q AELIGTHVLEKRPDA ++TL EFMY+FKALD+MD+GIDIC
Sbjct:   41 SSARQSTCESSSWGRASSLRFSSSATQAAARNRGLTSVQSASTTTTTSEQAATHGSVTFLPENDELAAEETVEIIYTPPTGLFEGADSLLYCGGFNGWDGEEDGVTMPMMPAGDEGNFRISINVPNFARVLDFVVTDGVRYDTGPEGLFYHAMVTHVREADKAGNIITYRQEADGTLIKTGMIEKVDPQELERMMDEATKAQAAAAAPPPVADPMVDETMAEVEQGLRQEITVTIDEQDAVQKMRAEASVLGERLGLGNMQVNEARDAFDVHDNEQGLLAFEDVGKVLDKLGFQDELDSAQLAELIGTHVLEKRPDADTMTLTEFMYLFKALDDMDIGIDIC 382          
BLAST of mRNA_F-serratus_M_contig10.77.1 vs. uniprot
Match: A0A6H5JA90_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA90_9PHAE)

HSP 1 Score: 327 bits (838), Expect = 1.080e-105
Identity = 169/214 (78.97%), Postives = 191/214 (89.25%), Query Frame = 1
Query:  370 RVLDFVVTDGVRYDTGPGEAFYHALVTHVIDADKTGNIITYRQESDGTLVKTGVIEKTDPLELERMMEKASKAQTDVAVGPSSA-PMVDDTIADVEKSLRQEIMVSVVEQDAVQKMRAEASVLGERLGLGNMQVNEARDAFDVFDSEEGLLAFEDVGKVLDKLGF-DELDSSQQAELIGTHVLEKRPDATSVTLMEFMYMFKALDEMDVGIDIC 1005
            +VLDFVVTDGVRYDTGP   FYHA+VTHV +ADK GNIITYRQE+DGTL+KTG+IEK DP ELERMM++A+KAQ   A  P  A PMVD+T+A+VEK LRQEI V++ EQDAVQKMRAEASVLGERLGLGNMQVNEARDAFDV D+E+GLLAFEDVGKVLDKLGF DELDS+Q AELIGTHVLEKRPDA ++TL EFMY+FKALD+MD+GIDIC
Sbjct:    3 QVLDFVVTDGVRYDTGPEGLFYHAMVTHVREADKAGNIITYRQEADGTLIKTGIIEKVDPQELERMMDEATKAQAAAAAPPPVADPMVDETMAEVEKGLRQEITVTIDEQDAVQKMRAEASVLGERLGLGNMQVNEARDAFDVHDNEQGLLAFEDVGKVLDKLGFQDELDSAQLAELIGTHVLEKRPDADTMTLTEFMYLFKALDDMDIGIDIC 216          
BLAST of mRNA_F-serratus_M_contig10.77.1 vs. uniprot
Match: A0A835YX15_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX15_9STRA)

HSP 1 Score: 263 bits (673), Expect = 3.390e-80
Identity = 141/293 (48.12%), Postives = 190/293 (64.85%), Query Frame = 1
Query:  127 SATAERPHGSVTFLPENEELAAEETVEIVYSPPRELFRDSDTLLYCGGFNGWDGEDEAITLPMIPIEDGKFRVSINIPNFARVLDFVVTDGVRYDTGPGEAFYHALVTHVIDADKTGNIITYRQESDGTLVKTGVIEKTDPLELERMMEKASKAQTDVAVGPSSAPMVDDTIADVEKSLRQEIMVSVVEQDAVQKMRAEASVLGERLGLGNMQVNEARDAFDVFDSEE-GLLAFEDVGKVLDKLGFDELDSSQQAELIGTHVLEKRPDATSVTLMEFMYMFKALDEMDVGIDI 1002
            +A  +   GS+ +    +EL+ E+T+ + Y+PPRE FR+   L YCGG+NGWDGE+  + +P++   DG+++ SI IPNFA+ LDF VTDG+RYD GP +AFYH  VTH+ + D  GNI  YRQ+ DGTL   G+IE  DP ELERM                    +D+ I  V ++++ E + S  EQ AVQ MRAEAS+LGE+LGLGNMQV+EARDAFD FD E  G L  E +G VLD++G   LD+ + A L+  H    RP+AT+V L E+M+M+  LD+ D GIDI
Sbjct:    6 AAATQLGSGSIEY--SAQELSVEDTIMVHYTPPREFFREESGLFYCGGYNGWDGEETPVMVPLLRQRDGRYKASITIPNFAKTLDFTVTDGIRYDMGPDDAFYHIRVTHIREEDDAGNIRLYRQDEDGTLTYEGMIETFDPQELERM--------------------IDEGIDKVAENIKVETL-STEEQQAVQVMRAEASILGEKLGLGNMQVSEARDAFDFFDDETTGELQVEHLGLVLDRMGLT-LDADEIAGLLERHTYATRPEATTVRLSEYMHMWSELDQADTGIDI 274          
BLAST of mRNA_F-serratus_M_contig10.77.1 vs. uniprot
Match: A0A7S2W5E1_9STRA (Hypothetical protein n=3 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W5E1_9STRA)

HSP 1 Score: 126 bits (316), Expect = 2.010e-28
Identity = 84/285 (29.47%), Postives = 140/285 (49.12%), Query Frame = 1
Query:  151 GSVTFLPENEELAAEETVEIVYSPPRELFRDSDTLLYCGGFNGWDGEDEAITLPMIPIEDGKFRVSINIPNFARVLDFVVTDGVRYDTGPGEAFYHALVTHVIDADKTGNIITYRQESDGTLVKTGVIEKTDPLELERMMEKASKAQTDVAVGPSSAPMVDDTIADVEKSLRQEIMVSVVEQDAVQKMRAEASVLGERLGLGNMQVNEARDAFD-VFDSEEGLLAFEDVGKVLDKLGFDELDSSQQAELIGTHVLEKRPDATSVTLMEFMYMFKALDEMDVGIDI 1002
            G V +   ++EL+  + + + Y+P   +F  +  L    GFNGW GE++ +         G+   S+ IPNFA+ + F++T+G R+DT  G+ +YHA V H ++ DK GN+       DGT+ +  + +  D  ELERM++    + T      +S   VD ++ DV +  R               +R EA    + L + NMQ +E R+AF+ V   ++     + +G  L  LG  E+      EL+  H  E    A+   L E M++F  LD+ + G++I
Sbjct:   61 GRVRWQSSSDELSVGDVLTVQYTPSPTIFPITSDLELWAGFNGWKGENKPLRAAFFKDSSGRLEASVTIPNFAKTVQFIITNGYRFDTNEGQ-YYHAHVFHTLETDKNGNVFRCHHAEDGTVNRLAM-QNRDAQELERMIDHELSSVT------NSVIQVDTSVTDVLEKKRL-------------ALREEALSTAQSLRMHNMQAHEVREAFEKVQHGDDAFTGRDSIGVFLGHLGM-EVPEPTIEELVARHCEEPNEGAS---LSEAMHIFHELDQENFGLNI 320          
BLAST of mRNA_F-serratus_M_contig10.77.1 vs. uniprot
Match: A0A1X6PBW0_PORUM (CBM_25 domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6PBW0_PORUM)

HSP 1 Score: 118 bits (296), Expect = 1.450e-25
Identity = 91/297 (30.64%), Postives = 148/297 (49.83%), Query Frame = 1
Query:  151 GSVTFLPENEELAAEETVEIVYSPPRELFRDSDTLLYCGGFNGWDGEDEAITL--PMIPIEDGKFRVSINIPNFARVLDFVVTD-----GVRYDTGPGEAFYHALVTHVIDADKTGNIITY-----RQESDGTLVKTGVIEKTDPLELERMMEKASKAQTDVAVGPSSAPMVDDTIADVEKSLRQEIMVSVVEQDAVQKMRAEASVLGERLGLGNMQVNEARDAFDVFDSE-EGLLAFEDVGKVLDKLGFDELDSSQQAELIGTHVLEKRPDATSVTLMEFMYMFKALDEMDVGIDI 1002
            G+ TF P+ + ++  +T+ + Y+PP  LF + D + Y GGFNGW  E +   L  P   + +G +RVS+ +PNFARVLDF         GVRYD   G  F H  V + +     G + +Y      +E+DGT  ++G+  K D    +R ++           G    P++DD                  E+ A+ + R E++++GE  GLGN+Q++ ARDAF+  D +  G+L+ E   + L  LGF+  +   +  L  + V  K      + + +FM ++  L+  D GI+I
Sbjct:   76 GTFTFSPDGD-VSVGDTLSVTYTPPVGLFTEDDVVCYAGGFNGWSSETDTTPLLFPAQSLFNGSYRVSVVVPNFARVLDFAFVQDAAAGGVRYDDNSGTLF-HIPVVNQLRLTANGEVQSYVAGSEDEEADGT--RSGL--KVDG---DRGVDLTGGGGVG---GVGMGPVLDDG-----------------EEAALHRSRGESALVGEAAGLGNIQISAARDAFERLDPDMTGVLSIESSVRALVLLGFEMTEGRLRTLL--SEVGAKVGAGGGLAMSDFMLVYADLENADEGIEI 341          
BLAST of mRNA_F-serratus_M_contig10.77.1 vs. uniprot
Match: W7U5L9_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U5L9_9STRA)

HSP 1 Score: 119 bits (298), Expect = 2.080e-25
Identity = 104/332 (31.33%), Postives = 164/332 (49.40%), Query Frame = 1
Query:  187 AAEETVEIVYSPPRE--------LFRD---SDTLLYCGGFNGWDGEDEAITLPMIPIEDGKFRVSINIPNFARVLDFVVTDG-VRYDTGPGEAFYHALVTHVIDADKTGNIITYRQESDGTLVKTGVIEKTDPLELERMMEKASKA-QTDVAVG------PSSAPMVDDTIADVEKSLRQEIM---------VSVVEQDA-----------------------------VQKMRAEASVLGERLGLGN-MQVNEARDAFD-VFDSEEGLLAFEDVGKVLDKLGFDELDSSQQAELIGTHVLEKRPDA-TSVTLMEFMYMFKALDEMDVGIDI 1002
            A  +T+ IVY P  E        L  D   S  LLY   FNGW+GE+  +  P+ P  DG    ++++PN+A+VLD +V+DG + +DT  G+ F+H  + HV + ++ G +  + Q  DG++  TGV    D  ELERM+E+   A +T  A G      P        T+AD E+S   ++           S + +DA                              Q++RAEA+ +GE LG+ + M +NE R++FD V D++  +L   ++ K L ++GFD L++++  +L       + P A   +TL  FM +F  LD  +VGI I
Sbjct:   75 AVGDTLSIVYDPAGEGADSPLTMLEEDEGASPCLLY--NFNGWNGEETPLRTPLFPQGDGTLMATVHVPNYAKVLDCIVSDGQLAFDTEAGQ-FFHLRIAHVQE-ERDGTVYNFFQGEDGSITLTGVQADNDARELERMIEEELSARETSSAEGQLFDEEPEERRFSSSTVADYEESHLSDLEGDSEEAGEGKSPLSEDADAGGEAARQLASSGSLGVHVAALEDVGNVPQQLRAEATAVGEALGISSSMIINELRESFDSVTDAD--VLTIGELPKALARMGFDGLEAAELEDLCMRVQGTEAPAAGRCLTLEHFMRIFHLLDTENVGIVI 400          
BLAST of mRNA_F-serratus_M_contig10.77.1 vs. uniprot
Match: M2W9F3_GALSU (Glycosyltransferase family 5 protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W9F3_GALSU)

HSP 1 Score: 99.0 bits (245), Expect = 1.410e-19
Identity = 71/266 (26.69%), Postives = 121/266 (45.49%), Query Frame = 1
Query:  208 IVYSPPRELFRDSDTLLYCGGFNGWDGEDEAITLPMIPIEDGKFRVSINIPNFARVLDFVVTDGVRYDTGPGEAFYHALVTHVIDADKTGNIITYRQESDGTLVKTGVIEKTDPLELERMMEKASKAQTDVAVGPSSAPMVDDTIADVEKSLRQEIMVSVVEQDAVQKMRAEASVLGERLGLGNMQVNEARDAFDVFDSE-EGLLAFEDVGKVLDKLGFDELDSSQQAELIGTHVLEKRPDATSVTLMEFMYMFKALDEMDVGIDI 1002
            I Y PP E FR    L Y GG+N W G D  + LP+   +   + V + +P  +  ++F  TDGV YDT  G AFYH  +   +  ++  N       S+ T +      + DPL   ++ E  ++   D                               E+ A++K RAEA+ +GE +GL N+ + EAR  F+ FD+   G ++ E+    +++LGF+  D       +      +  D  ++ + EF+Y++ +L+  + G+ I
Sbjct:   25 IQYQPPVEYFRSGQDLFYTGGYNNWSGVDNPLILPLRQKKADLYEVLVPLPEGSVSVEFAFTDGVVYDTNHG-AFYHIPLEQFV-TEEENNSHHIENVSENTKLS-----ELDPL---KIPEGPTRYTND-------------------------------EEIALRKARAEATAVGESMGLSNVLMTEARTEFERFDTRMSGWISREEAKMCIERLGFEIGDKEFHEWTLACKEYSRDEDMENIHITEFIYLYGSLELRNEGLQI 249          
BLAST of mRNA_F-serratus_M_contig10.77.1 vs. uniprot
Match: A0A7S1DE67_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DE67_HEMAN)

HSP 1 Score: 92.0 bits (227), Expect = 1.430e-18
Identity = 38/83 (45.78%), Postives = 55/83 (66.27%), Query Frame = 1
Query:  196 ETVEIVYSPPRELFRDSDTLLYCGGFNGWDGEDEAITLPMIPIEDGKFRVSINIPNFARVLDFVVTDGVRYDTGPGEAFYHAL 444
            +TV + Y+PP  LF     + Y GG+NGWDGE + + +P+ P   G+ R +I +PNFARV+DF  +DG+R+DT  G  F+ AL
Sbjct:   25 DTVTVTYAPPPSLFPAGSDIFYLGGWNGWDGETDPMAVPLAPCAGGRHRCTITVPNFARVVDFCFSDGLRFDTNGGAYFHMAL 107          
BLAST of mRNA_F-serratus_M_contig10.77.1 vs. uniprot
Match: A0A6T6NQE4_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A6T6NQE4_9RHOD)

HSP 1 Score: 66.6 bits (161), Expect = 7.270e-9
Identity = 58/242 (23.97%), Postives = 103/242 (42.56%), Query Frame = 1
Query:  283 DGEDEAITLPMIPIEDGKFRVSINIPNFARVLDFVVTDGVRYDTGPGEAFYHALVTHVIDADKTGNIITYRQESDGTLVKTGVIEKTDPLELERMMEKASKAQTDVAVGPSSAPMVDDTIADVEKSLRQEIMVSVVEQDAVQKMRAEASVLGERLGLGNMQVNEARDAFDVFDSEE-GLLAFEDVGKVLDKLGFDELDSSQQAELIGTHVLEK-RPDATSVTLMEFMYMFKALDEMDVGIDI 1002
            +G+D  +  P     DG +R+ + IPNFA+V+DF V+DG+RYDT  G  F+H  +         G I  Y              E+   +E+    +  S   T+VA                         ++   +  + + RA A ++ ER  LG++ +++A  A+D  D    G +A        +++GF E D +  ++L+      K R     +T  +FM  +  L+  +  ++I
Sbjct:    1 NGDDVPVMTPAQLDADGAYRIVVTIPNFAQVVDFAVSDGIRYDTNDGN-FFHIPIRFQQRLGDDGEIEVYDSAD----------EEQSKVEIREFRDAHS---TNVAA------------------------ITPENEKLLHEARATADMISERFSLGSIHISQATAAYDRIDKAGVGKIAINAAILAFEEMGF-ETDKNTLSDLLNDFAEGKERTLLEELTASDFMVAYALLESDESALEI 203          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig10.77.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
D8LCD2_ECTSI5.300e-15068.71CBM_25 domain-containing protein n=1 Tax=Ectocarpu... [more]
A0A6H5JA90_9PHAE1.080e-10578.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835YX15_9STRA3.390e-8048.12Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2W5E1_9STRA2.010e-2829.47Hypothetical protein n=3 Tax=Rhizochromulina marin... [more]
A0A1X6PBW0_PORUM1.450e-2530.64CBM_25 domain-containing protein n=1 Tax=Porphyra ... [more]
W7U5L9_9STRA2.080e-2531.33Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
M2W9F3_GALSU1.410e-1926.69Glycosyltransferase family 5 protein n=1 Tax=Galdi... [more]
A0A7S1DE67_HEMAN1.430e-1845.78Hypothetical protein (Fragment) n=1 Tax=Hemiselmis... [more]
A0A6T6NQE4_9RHOD7.270e-923.97Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig10contigF-serratus_M_contig10:633293..637758 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score446.0
Seed ortholog evalue1.3e-122
Seed eggNOG ortholog2880.D8LCD2
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Starch/carbohydrate-binding module (family 53)
EggNOG OGs2F0FD@1,2T1M1@2759
Ec32 ortholog descriptionCarbohydrate binding module family 25
Ec32 orthologEc-14_005190.1
COG Functional cat.O
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons7
Model size1859
Cds size885
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928784.6296747-UTR-F-serratus_M_contig10:633292..6341431622928784.6296747-UTR-F-serratus_M_contig10:633292..634143Fucus serratus maleUTRF-serratus_M_contig10 633293..634143 -
1690962569.7683272-UTR-F-serratus_M_contig10:633292..6341431690962569.7683272-UTR-F-serratus_M_contig10:633292..634143Fucus serratus maleUTRF-serratus_M_contig10 633293..634143 -
1622928784.7657723-UTR-F-serratus_M_contig10:637635..6377581622928784.7657723-UTR-F-serratus_M_contig10:637635..637758Fucus serratus maleUTRF-serratus_M_contig10 637636..637758 -
1690962569.8563-UTR-F-serratus_M_contig10:637635..6377581690962569.8563-UTR-F-serratus_M_contig10:637635..637758Fucus serratus maleUTRF-serratus_M_contig10 637636..637758 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928784.6472168-CDS-F-serratus_M_contig10:634143..6341891622928784.6472168-CDS-F-serratus_M_contig10:634143..634189Fucus serratus maleCDSF-serratus_M_contig10 634144..634189 -
1690962569.7796245-CDS-F-serratus_M_contig10:634143..6341891690962569.7796245-CDS-F-serratus_M_contig10:634143..634189Fucus serratus maleCDSF-serratus_M_contig10 634144..634189 -
1622928784.6666162-CDS-F-serratus_M_contig10:634459..6345541622928784.6666162-CDS-F-serratus_M_contig10:634459..634554Fucus serratus maleCDSF-serratus_M_contig10 634460..634554 -
1690962569.7918875-CDS-F-serratus_M_contig10:634459..6345541690962569.7918875-CDS-F-serratus_M_contig10:634459..634554Fucus serratus maleCDSF-serratus_M_contig10 634460..634554 -
1622928784.6811817-CDS-F-serratus_M_contig10:634920..6350221622928784.6811817-CDS-F-serratus_M_contig10:634920..635022Fucus serratus maleCDSF-serratus_M_contig10 634921..635022 -
1690962569.8004973-CDS-F-serratus_M_contig10:634920..6350221690962569.8004973-CDS-F-serratus_M_contig10:634920..635022Fucus serratus maleCDSF-serratus_M_contig10 634921..635022 -
1622928784.6978228-CDS-F-serratus_M_contig10:635285..6354981622928784.6978228-CDS-F-serratus_M_contig10:635285..635498Fucus serratus maleCDSF-serratus_M_contig10 635286..635498 -
1690962569.808836-CDS-F-serratus_M_contig10:635285..6354981690962569.808836-CDS-F-serratus_M_contig10:635285..635498Fucus serratus maleCDSF-serratus_M_contig10 635286..635498 -
1622928784.7153995-CDS-F-serratus_M_contig10:635940..6361201622928784.7153995-CDS-F-serratus_M_contig10:635940..636120Fucus serratus maleCDSF-serratus_M_contig10 635941..636120 -
1690962569.8178954-CDS-F-serratus_M_contig10:635940..6361201690962569.8178954-CDS-F-serratus_M_contig10:635940..636120Fucus serratus maleCDSF-serratus_M_contig10 635941..636120 -
1622928784.7305934-CDS-F-serratus_M_contig10:636678..6369201622928784.7305934-CDS-F-serratus_M_contig10:636678..636920Fucus serratus maleCDSF-serratus_M_contig10 636679..636920 -
1690962569.8301775-CDS-F-serratus_M_contig10:636678..6369201690962569.8301775-CDS-F-serratus_M_contig10:636678..636920Fucus serratus maleCDSF-serratus_M_contig10 636679..636920 -
1622928784.7439864-CDS-F-serratus_M_contig10:637628..6376351622928784.7439864-CDS-F-serratus_M_contig10:637628..637635Fucus serratus maleCDSF-serratus_M_contig10 637629..637635 -
1690962569.8460877-CDS-F-serratus_M_contig10:637628..6376351690962569.8460877-CDS-F-serratus_M_contig10:637628..637635Fucus serratus maleCDSF-serratus_M_contig10 637629..637635 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig10.77.1prot_F-serratus_M_contig10.77.1Fucus serratus malepolypeptideF-serratus_M_contig10 634144..637635 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig10.77.1

>prot_F-serratus_M_contig10.77.1 ID=prot_F-serratus_M_contig10.77.1|Name=mRNA_F-serratus_M_contig10.77.1|organism=Fucus serratus male|type=polypeptide|length=295bp
MSATAERPHGSVTFLPENEELAAEETVEIVYSPPRELFRDSDTLLYCGGF
NGWDGEDEAITLPMIPIEDGKFRVSINIPNFARVLDFVVTDGVRYDTGPG
EAFYHALVTHVIDADKTGNIITYRQESDGTLVKTGVIEKTDPLELERMME
KASKAQTDVAVGPSSAPMVDDTIADVEKSLRQEIMVSVVEQDAVQKMRAE
ASVLGERLGLGNMQVNEARDAFDVFDSEEGLLAFEDVGKVLDKLGFDELD
SSQQAELIGTHVLEKRPDATSVTLMEFMYMFKALDEMDVGIDIC*
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mRNA from alignment at F-serratus_M_contig10:633293..637758-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig10.77.1 ID=mRNA_F-serratus_M_contig10.77.1|Name=mRNA_F-serratus_M_contig10.77.1|organism=Fucus serratus male|type=mRNA|length=4466bp|location=Sequence derived from alignment at F-serratus_M_contig10:633293..637758- (Fucus serratus male)
GGCTTTGTCGGAGCAGCTAGACCCGCAGACTCCCGATCATGCTTCAGACA GCCTCTCAGTAATCGTACACCTTGGGGACAGTCGACAGTAAAGAGAGCAG GCCGACATCGCGGGCCGGTCTTGATGTCAGGTATGAGCACAATAGGCCAA AGTCTGGTTCACTTCGGCCTACGCCCGGAAACACTCCAATACGCATCGGA TGTCTTCGGGTTGAACTCTTCAATCCATATCGTGTACAGGACAGCTGCAG TGAGTGGCGCTTTTTGAATGCAGAATTTTGTGTACAAATGCAGCCGCCGG ATCGATACGCCTTCAAGATGACAGCTCCCGGGAAAATGTTTTTCCCTGTC TCCGTTGCCTCTGAAAACTTGATTACCGCTACTGTCAGTTGTACTATTTA ACCTATTACTAAGCCTCTCTTGCCTTGCCCTCATCTTAAGATATGGCATT CGGTGCGTTGACGAAGAGACCTGGACATCGACAACGATCAACAGACTGCG TACCGAGGGTCATCTAAATTTGTGTCGTTGGCACTGGTGAAATACGCGTT GCGGGTGTGCCCACGCTCTTGCGTTCAAAAACATGCACCGCTACACGCGA ATGTTACTACCATAGGGGAACCCGTTTAAATGCCATGAAGAGGTTTTGTA TTTGCAGCCTTTGATCCCACCTAAACGTTTTGTCATTTTTTCTTCTGACT GGAGGATGCTCAGAAAGTATAGGCGCGTTCTGGTTTTTCTTTATACACGC GAAACCTTACAACAATGATAAGTCAATCGGCTCGGCTATGCCCCCATATT CCCGCCCCTGCCATTTCCGGCGCCCTCTTGCATGGCAGCGACGGCCGAGC GTCCCCACGGCAGCGTCACATTCTTGCCGGAAAACGAAGAGCTCGCGGCA GAGGAGACCGTTGAAATCGTATACTCTCCCCCTCGGGAGCTCTTCAGGGA CTCGGATACCCTGCTCTACTGCGGGGGATTCAACGGCTGGGATGGGGAGG ACGAGGCTATCACGCTACCCATGATTCCGATTGAGGACGGGAAGTTTCGC GTCAGCATCAATATTCCCAACTTTGCCCGGGTGCGCATGTGGGATGCGGA CGCGATGATGACACCTGCATGTTGTAAGGGGAAACCCATCAGGATCATGT CGTTTTCAGCGTCGCACGCAACGCCGCCGCGAACGTGTAACGGCCGGCTT CGACTCGCGGTTTGACCCGGCACGAGTCTCCCGAGGGCCGAAGATCATAT CGCATAATTTGCTTGTCCTACCCAGACACTATACTCGCTACTTAGATTGT ATCAGTCGATCATTCGTCACCATGCGCATATATTGTATAAATCGAGGATG TGGGCAGCATAACATGGGACATTCCCGAGTTCGTGCCCTCCACACGTCAC TTTTGTCGATCGGGTGATGTTTGGCAGACGCTGATCAAGCGCGCCGCGTT TCGCGCGAGTACGTTCCATTCTGCCACCCTTTTCGCCTGAGGATAAACGG CTCGGTGTCATTCTTACAAATCACATGAAGCATCAAATAACCCGGTGATC TGTCTAAGCTGAATAGTATTTCGAGGTACTCCTTGTGAAGCTCAGAGAGA CACGTCGCTCCACGTCTTCGTCCTTTTACTCTCCCAAGGTTCTCGACTTC GTTGTTACCGACGGCGTGCGCTACGATACCGGGCCCGGGGAAGCCTTCTA CCACGCGCTTGTCACCCACGTAATAGATGCGGACAAGACGGGGAACATAA TCACCTACAGGCAAGAGTCCGACGGGACTCTCGTCAAAACTGGGGTCATC GAGAAGACGGATCCTCTCGTGAGTGTGTGAGCACCGGCGGAAACTTCGCT TTTTTGTCCGCGGGCGAGTGATCCCACGACATACACTCTGACCTCGACGA ACTCAAGACAGCATGTGTGTGAATCTCACTCCCAGGGGATCTTCCTCGTT GTCGTTTACACTTTTTAAAATTGTACAAGTGTCCAGAGCCGCAACACTCG TGCAATCATTGGAGCCGTCTGTAATGACACCATCCGTCTGCCCCAGCATT GTATCCCGAGCGGCTTCAAGGGACGTTTAGTTTCTGTCATGACACGATGA CCCCCCGCCCGGGACGTGGACCCCGGGCCTGGAGAACGTCAGCGGCGTCG TGCTGCGCAGATCTCCGGCCTGGTCAGATAACCGAAATGCCCCTTTGAAC AGGGATGACTTCGGCCACCTCCGCAATGCCTTTACACTCAATATATCGCC TGGTTTTCAGGAGCTGGAACGAATGATGGAAAAAGCCTCAAAGGCCCAGA CCGACGTAGCCGTGGGGCCTTCTTCCGCTCCTATGGTGGACGACACGATT GCCGATGTGGAGAAGAGCCTTCGGCAGGAGATAATGGTGTCCGTGGTCGA GCAGGACGCGGTACAAAAGATGCGCGCCGAGGCTTCTGTCCTAGGAGAGC GACTGGGTTTGGGCAACATGCAGGTGAGCGTGGTGACTGGTGGATATAAA TAAACGCGCGATGGATGTCGCTTCTGCCTGGGTATCCCTGACGCGGCTTC GCGAAGCTGTGACTGAGGGAGAGCGTGCTTGTGTACCTGCTTATGGCATG ATGGGCGGTGCTCGAAAGAACGGTAGGTAAGCGATTGCTTCAGGGGTAGT CTCATTCCTTTCCGGGATGAGATGCATGGCACTCTCTTGGGTCATGGACG TGCCAATAGGAGAACACCGAAATCCGATCGCCGCAGGTCAACGAGGCACG GGATGCGTTCGACGTCTTCGATAGCGAGGAAGGGCTACTCGCATTCGAAG ATGTGGGCAAGGTGTTGGACAAGCTCGGCTTTGACGAGGTGTGTAGTTCC CCCAGCGCGGACCGATTCAACTTTCCCGCGTGTCTACTCCAACCGTTGGC ATGATTCGCAAGCAGTGTGGATATAGGTCATGCCTCCCTCGCCTTGTGGT GCTCTCACGAGAAGCCATGGCTACTGTGCGTCATCTAGGGGAGCGAACCT CTGTAAAAAATAAATAGTTAACTCCTCTTGCGCTTCTGTCGACTGCGCTT TCCTTGTGTCCTGGATCGAGAGACTTAGGGATGCCACTCTGTGATATCGT TAGATAACTAGGAGGGGACGAGATATCCCGCCTGCGCGACGACAATCACC CCCCAACGCCCCCCTCCTCCCGGTTCTATACCGCGGGAAACGCGTCCCTT GCAGCTGGACTCGTCCCAGCAGGCGGAGCTGATCGGAACGCACGTGCTGG AGAAACGGCCGGATGCCACCTCAGTAACCCTGATGGAGTTCATGTATATG TGAGTCATATCCTCGAATAAAACTTGAGGGGTCAAATGTCTTTGGACAGC TCCCGACATGTCAACGGCCAGTCTTGCAGATTTAACCCCCATCATAAAGT ACGAACGCCACCGCGAGCGTTAGTCGGCCTGCCATGCCCAGCAATCACCT CAACGTTTTCTCCCAGTCGCGAATAGTTTACCGGATTCATCGATTATTTT AGTGATGAACGTTCCAATGTCATCCCCCCCCCCTCGCCGACGCAAACGTT GTCATGTCTGTCGCGACAGGTTTAAGGCGCTTGACGAGATGGACGTCGGC ATCGATATTTGCTGACTTGACACGTGGGCAGCTTCGAACGCTCCTCGACC CCGTCAAGAAGACCACCTCGCGGTTGCAAGCCTTTTCCGGAACCAAAAGT CTTGCGCGAGTTCACCCCCTCACACCTTGCCGCAATCCCCCGTCCGTCGG AATCGTACCAAGGCGTCAAACGATGGGTGCCAGCCTGAGCTTGGGAAGAA ACGCCACGGGCAGCAGCAGCATGTCACTGCGTCTTAAGCGTGATGCCATA GGAGGGACAGTCTCTTCTCCCGTCTTAGCAGCCGCTGATAAGTTTTTTGA TGTACAGATGGAACTTGGTTGGGTAGACTGTTATGGTCGTCACTTAATAG TAGGGTATGAGAAGTGTAACGTGGGAGGCACAAAGCTTGGGACACAATTG GTTCATCCCTTGCCTAATCGTGGTTTTGTTTCGTCTCTCGATCGCAAGAA TCGCGCGACGTGTGCAGTAATTTAGCTCTATCAATAGTATTAGTATATAT ACTATAATAGGAAGATACGACAAAGGATGAGAGAGAGAGCGGACAGCGCC GCACGAATGGTAGCCTTTCTACAGACGGATTGATTTGTTGAGGTTTATCA GGGACATCGTTCGCTTGGGGGTCTCCTCGATAATACAGCTGGTCCCACGC TGTCTTGAAGCCTGTTCTCCATTGTGTTTGCATCCAACATAGACATGACC GTTGAGTGGACCTTACGTAGACAGTTGGTTTCACCAGTTCAGGCTACCAA AAATAAATCGCAAGAAACGTGTCGGAGTTCAAGTCGGTTCCCTCAAAACG TACTCTCATATTTCGACATTTCGGTTGGTACCTGGTAGGGTTTACTTTGT GGACTGACTCTTGTTC
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Coding sequence (CDS) from alignment at F-serratus_M_contig10:633293..637758-

>mRNA_F-serratus_M_contig10.77.1 ID=mRNA_F-serratus_M_contig10.77.1|Name=mRNA_F-serratus_M_contig10.77.1|organism=Fucus serratus male|type=CDS|length=1770bp|location=Sequence derived from alignment at F-serratus_M_contig10:633293..637758- (Fucus serratus male)
ATGTCAGATGTCAGCGACGGCCGAGCGTCCCCACGGCAGCGTCACATTCT
TGCCGGAAAACGAAGAGCTCGCGGCAGAGGAGACCGTTGAAATCGTATAC
TCTCCCCCTCGGGAGCTCTTCAGGGACTCGGATACCCTGCTCTACTGCGG
GGGATTCAACGGCTGGGATGGGGAGGACGAGGCTATCACGCTACCCATGA
TTCCGATTGAGGACGGGAAGTTTCGCGTCAGCATCAATATTCCCAACTTT
GCCCGGCGACGGCCGAGCGTCCCCACGGCAGCGTCACATTCTTGCCGGAA
AACGAAGAGCTCGCGGCAGAGGAGACCGTTGAAATCGTATACTCTCCCCC
TCGGGAGCTCTTCAGGGACTCGGATACCCTGCTCTACTGCGGGGGATTCA
ACGGCTGGGATGGGGAGGACGAGGCTATCACGCTACCCATGATTCCGATT
GAGGACGGGAAGTTTCGCGTCAGCATCAATATTCCCAACTTTGCCCGGGT
TCTCGACTTCGTTGTTACCGACGGCGTGCGCTACGATACCGGGCCCGGGG
AAGCCTTCTACCACGCGCTTGTCACCCACGTAATAGATGCGGACAAGACG
GGGAACATAATCACCTACAGGCAAGAGTCCGACGGGACTCTCGTCAAAAC
TGGGGTCATCGAGAAGACGGATCCTCTCGTTCTCGACTTCGTTGTTACCG
ACGGCGTGCGCTACGATACCGGGCCCGGGGAAGCCTTCTACCACGCGCTT
GTCACCCACGTAATAGATGCGGACAAGACGGGGAACATAATCACCTACAG
GCAAGAGTCCGACGGGACTCTCGTCAAAACTGGGGTCATCGAGAAGACGG
ATCCTCTCGAGCTGGAACGAATGATGGAAAAAGCCTCAAAGGCCCAGACC
GACGTAGCCGTGGGGCCTTCTTCCGCTCCTATGGTGGACGACACGATTGC
CGATGTGGAGAAGAGCCTTCGGCAGGAGATAATGGTGTCCGTGGTCGAGC
AGGACGCGGTACAAAAGATGCGCGCCGAGGCTTCTGTCCTAGGAGAGCGA
CTGGGTTTGGGCAACATGCAGGAGCTGGAACGAATGATGGAAAAAGCCTC
AAAGGCCCAGACCGACGTAGCCGTGGGGCCTTCTTCCGCTCCTATGGTGG
ACGACACGATTGCCGATGTGGAGAAGAGCCTTCGGCAGGAGATAATGGTG
TCCGTGGTCGAGCAGGACGCGGTACAAAAGATGCGCGCCGAGGCTTCTGT
CCTAGGAGAGCGACTGGGTTTGGGCAACATGCAGGTCAACGAGGCACGGG
ATGCGTTCGACGTCTTCGATAGCGAGGAAGGGCTACTCGCATTCGAAGAT
GTGGGCAAGGTGTTGGACAAGCTCGGCTTTGACGAGGTCAACGAGGCACG
GGATGCGTTCGACGTCTTCGATAGCGAGGAAGGGCTACTCGCATTCGAAG
ATGTGGGCAAGGTGTTGGACAAGCTCGGCTTTGACGAGCTGGACTCGTCC
CAGCAGGCGGAGCTGATCGGAACGCACGTGCTGGAGAAACGGCCGGATGC
CACCTCAGTAACCCTGATGGAGTTCATGTATATCTGGACTCGTCCCAGCA
GGCGGAGCTGATCGGAACGCACGTGCTGGAGAAACGGCCGGATGCCACCT
CAGTAACCCTGATGGAGTTCATGTATATGTTTAAGGCGCTTGACGAGATG
GACGTCGGCATCGATATTTGCTGAGTTTAAGGCGCTTGACGAGATGGACG
TCGGCATCGATATTTGCTGA
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