mRNA_F-serratus_M_contig10.57.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig10.57.1 vs. uniprot
Match: D7G2G9_ECTSI (Similar to Chalcone Isomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2G9_ECTSI) HSP 1 Score: 254 bits (649), Expect = 7.080e-79 Identity = 131/205 (63.90%), Postives = 165/205 (80.49%), Query Frame = 2 Query: 449 ASAPLSKEIVDAATGLSLPRTKRF--SKSELACLGVGVRAKSIAIAKVNVYTVGLYVEPKGARRALRKYAGSDPASLRKDASVFKILGAAG-FNKYLHLVFARKVGAKKVVEALTTVQGVSKDVLDRFSGIILDAVGGSINKGEAISLGWEGQ-KMVVLVRDRPAGTVVDAALPEAVFALYLGDSPVSPEAKAAFAEGLPAFLAS 1051 A PLS ++ D ATGL LPRTK+F SK+ L CLGVGVR KS+A VNVYTVGLYVEPKGAR+AL+ YAG DP L KD SV+++LG AG F+KYLHLVFAR VGA+KVV+A T V+GV++DVLD+FS + ++ VG SIN+ E+++LGWEG+ ++VVLVRD+ G+V+D +LP +VF L+LG PVSP AK AFAEG+PAFLAS Sbjct: 25 AKTPLSPDVRDPATGLVLPRTKQFASSKTGLVCLGVGVRVKSVAFVNVNVYTVGLYVEPKGARKALKSYAGRDPEELSKDKSVYRVLGGAGDFSKYLHLVFARSVGAQKVVDAFTAVKGVNQDVLDKFSSLTMEGVGKSINREESVTLGWEGKDRLVVLVRDKEIGSVIDESLPASVFNLFLGSDPVSPVAKTAFAEGVPAFLAS 229
BLAST of mRNA_F-serratus_M_contig10.57.1 vs. uniprot
Match: A0A6H5KHX0_9PHAE (FAPb protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHX0_9PHAE) HSP 1 Score: 252 bits (643), Expect = 2.390e-76 Identity = 129/205 (62.93%), Postives = 165/205 (80.49%), Query Frame = 2 Query: 449 ASAPLSKEIVDAATGLSLPRTKRF--SKSELACLGVGVRAKSIAIAKVNVYTVGLYVEPKGARRALRKYAGSDPASLRKDASVFKILGAAG-FNKYLHLVFARKVGAKKVVEALTTVQGVSKDVLDRFSGIILDAVGGSINKGEAISLGWEGQ-KMVVLVRDRPAGTVVDAALPEAVFALYLGDSPVSPEAKAAFAEGLPAFLAS 1051 A PLS ++ D ATGL LPRTK+F SK+ L CLGVGVR KS+A VNVYTVGLYVEPKGAR+AL+ YAG DP L KD SV+++LG AG F+KYLHLVFAR VGA+KVV+A T V+GV++DVLD+FS + ++ VG SI++ E+++LGWEG+ ++VVLVRD+ G+++D ALP +VF+L+LG PVSP AK AFAEG+P FLAS Sbjct: 143 AKTPLSPDVRDPATGLVLPRTKQFASSKTGLVCLGVGVRVKSVAFVTVNVYTVGLYVEPKGARKALKSYAGRDPEELSKDKSVYRVLGGAGDFSKYLHLVFARSVGAQKVVDAFTAVKGVNQDVLDKFSSLTMEGVGKSIDREESVTLGWEGKDRLVVLVRDKEIGSIIDEALPASVFSLFLGSDPVSPVAKTAFAEGVPPFLAS 347
BLAST of mRNA_F-serratus_M_contig10.57.1 vs. uniprot
Match: A0A0G4GUV1_VITBC (Chalcone_isomerase domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GUV1_VITBC) HSP 1 Score: 155 bits (391), Expect = 5.920e-41 Identity = 88/199 (44.22%), Postives = 122/199 (61.31%), Query Frame = 2 Query: 458 PLSKEIVDAATGLSLPRTKRFSKS-ELACLGVGVRAKSIAIAKVNVYTVGLYVEPKGARRALRKYAGSDPASLRKDASVFKILGAAGFNKYLHLVFARKVGAKKVVEALTTVQGVSKDVLDRFSGIILDAVGGSINKGEAISLGW-EGQKMVVLVRDRPAGTVVDAALPEAVFALYLGDSPVSPEAKAAFAEGLPAFLA 1048 P++ + D TG+ P F + ++ LG G R K++ IAKVNVY+VGLYVEPK A +AL + G SL D + L K + L FAR VGA KV +AL+ V+GV +V+ F ++ +G SI K E I++GW E Q++ VL+R +PAGTVVDA LP+A F LYLG +PVS EAK AF + + + + Sbjct: 4 PVAAVLKDKVTGIEFPCEATFPGTPKMTLLGAGPRRKNLGIAKVNVYSVGLYVEPKEAAKALSSFKGESEESLMNDDRFYDTLLGKEVPKLVLLKFARTVGAHKVADALSAVKGVEPEVVSEFCSLLEKGMGASIKKAETIAMGWTEDQRLDVLIRGQPAGTVVDAKLPKAFFELYLGKTPVSMEAKHAFVKRVASLFS 202
BLAST of mRNA_F-serratus_M_contig10.57.1 vs. uniprot
Match: A0A0G4GWT2_9ALVE (Chalcone_isomerase domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GWT2_9ALVE) HSP 1 Score: 142 bits (358), Expect = 6.370e-36 Identity = 87/192 (45.31%), Postives = 119/192 (61.98%), Query Frame = 2 Query: 458 PLSKEIVDAATGLSLPRTKRFSKS-ELACLGVGVRAKSI-AIAKVNVYTVGLYVEPKGARRALRKYAGSDPASLRKDASVFKILGAAGFNKYLHLVFARKVGAKKVVEALTTVQGVSKDVLDRFSGIILDAVGGSINKGEAISLGW-EGQKMVVLVRDRPAGTVVDAALPEAVFALYLGDSPVSPEAKAAFA 1024 PL+ + DAATGL F S ++ LG GVRAK++ VNVY+VGLYVEP AR+ L + + A L K +K L K +HL FAR VGA K+VEALT++ GV ++ L +FS ++LD++G SI E ++L + + V+VR + AG+V D+ LP+A F LYLG +PVS EAK AFA Sbjct: 31 PLAAILTDAATGLDFETDVSFPSSPKMTLLGAGVRAKALLGPIAVNVYSVGLYVEPSKARQTLSGFKTIEEAELAKKEDFYKALMKEDLPKAMHLKFARSVGASKIVEALTSLNGVPEESLSKFSKLLLDSIGSSIGYKETVTLSSSKPDTLDVIVRGKHAGSVRDSKLPKAFFDLYLGKNPVSSEAKKAFA 222
BLAST of mRNA_F-serratus_M_contig10.57.1 vs. uniprot
Match: A0A4D9CUC0_9STRA (Chalcone_isomerase domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CUC0_9STRA) HSP 1 Score: 132 bits (333), Expect = 2.910e-32 Identity = 79/200 (39.50%), Postives = 112/200 (56.00%), Query Frame = 2 Query: 467 KEIVDAATGLSLPRTKRFSKS----ELACLGVGVRAKSIAIAKVNVYTVGLYVEPKGARRALRKYAGSDPASLRKDASVFKIL--GAAGFNKYLHLVFARKVGAKKVVEALTTVQGVSKDVLDRFSGIILDAVGGSINKGEAISLGWE-GQKMVVLVRDRPAGTVVDAALPEAVFALYLGDSPVSPEAKAAFAEGLPAFL 1045 KE+VD TGL P + EL+ LGVG R K++ + +VNVY VGLY+E R L+ + G +L K+A + L +G N+ L+L FAR V A K+VEAL V GV K+V+ F +L A+G S+ + E ++L W ++ + VRD+P T L +F LYLG+ P+SPEAK FA P + Sbjct: 36 KEVVDKVTGLVFPMHRILPHGGRGRELSLLGVGPRRKNLFVVEVNVYAVGLYLETSQLSR-LKAFRGKSSEALAKEAKYYATLMKEGSGLNRALYLTFARTVPAGKIVEALAAVDGVKKEVMADFKKSLLTAIGSSLKEKETLTLAWTPDDRLSLFVRDKPVKTFPSLELARGIFNLYLGEKPISPEAKKGFAAVAPQHI 234
BLAST of mRNA_F-serratus_M_contig10.57.1 vs. uniprot
Match: A0A7S2UYK7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYK7_9STRA) HSP 1 Score: 130 bits (328), Expect = 6.330e-32 Identity = 78/182 (42.86%), Postives = 107/182 (58.79%), Query Frame = 2 Query: 443 EQASAPLSKEIVDAATGLSLPRTKRFSKSE----LACLGVGVRAKS-IAIAKVNVYTVGLYVEPKGARRALRKYAGSDPASLRKDASVFKILGAAGFNKYLHLVFARKVGAKKVVEALTTVQGVSKDVLDRFSGIILDAVGGSINKGEAISLGWEGQ-KMVVLVRDRPAGTVVDAALPEAVF 970 E++S+ + ++ + TG+ P TK FS + L GVGVR K+ + KVNVY +GLYV+P A RA KY G D + KD FKIL + GF K +++ +AR VG KVV+AL V LD F +++ G +I E ++LGWEG+ K+VV VRD+ GTV A L EAVF Sbjct: 21 EESSSSAADKVTEPVTGIDFPVTKSFSLNSTSPTLTLTGVGVRVKALVGPLKVNVYGMGLYVDPSRAARAFSKYKGKDAKEVAKDDDFFKILHSPGFAKAIYIDYARAVGVDKVVDALRLVPTEDTAALDYFCDLLVIGTGSTIGNRETMTLGWEGKDKLVVQVRDKTVGTVTSAKLVEAVF 202
BLAST of mRNA_F-serratus_M_contig10.57.1 vs. uniprot
Match: W7TMS0_9STRA (Chalcone isomerase-like protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TMS0_9STRA) HSP 1 Score: 132 bits (331), Expect = 1.900e-29 Identity = 79/200 (39.50%), Postives = 112/200 (56.00%), Query Frame = 2 Query: 467 KEIVDAATGLSLPRTKRFSKS----ELACLGVGVRAKSIAIAKVNVYTVGLYVEPKGARRALRKYAGSDPASLRKDASVFKIL--GAAGFNKYLHLVFARKVGAKKVVEALTTVQGVSKDVLDRFSGIILDAVGGSINKGEAISLGWE-GQKMVVLVRDRPAGTVVDAALPEAVFALYLGDSPVSPEAKAAFAEGLPAFL 1045 KE+VD TGL P + EL LGVG R K++ + +VNVY VGLY+E R L+ + G +L K+A + L +G N+ L+L+FAR V A K+VEAL V GV K+V+ F +L A+G S+ + E ++L W ++ + VRD+P T L +F LYLG+ P+SPEAK FA P + Sbjct: 400 KEVVDKVTGLVFPMHRILPHGGRGRELTLLGVGPRRKNLFVVEVNVYAVGLYLETSLLGR-LKAFRGKSSEALAKEAKYYATLMKEGSGLNRALYLIFARTVPAGKIVEALAAVDGVKKEVMADFKKSLLAAIGSSLKEKETLTLAWTPDDRLSLFVRDKPVKTFPSLELARGIFNLYLGEKPISPEAKKGFAAVAPQHI 598
BLAST of mRNA_F-serratus_M_contig10.57.1 vs. uniprot
Match: A0A7S1JL13_9ALVE (Hypothetical protein n=1 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A7S1JL13_9ALVE) HSP 1 Score: 116 bits (290), Expect = 3.750e-27 Identity = 66/147 (44.90%), Postives = 90/147 (61.22%), Query Frame = 2 Query: 611 VEPKGARRALRKYAGSDPASLRKDASVFKILGAAGFNKYLHLVFARKVGAKKVVEALTTVQGVSKDVLDRFSGIILDAVGGSINKGEAISLGW-EGQKMVVLVRDRPAGTVVDAALPEAVFALYLGDSPVSPEAKAAFAEGLPAFLA 1048 VEPK A +AL + G SL D + L K + L FAR VGA KV +AL+ V+GV +V+ F ++ +G SI K E I++GW E Q++ VL+R +PAGTVVDA LP+A F LYLG +PVS EAK AF + + + + Sbjct: 1 VEPKEASKALSSFKGESEESLMNDDRFYDTLLGKEVPKLVLLKFARTVGAHKVADALSAVKGVEPEVVSEFCSLLEKGMGASIKKAETIAMGWTEDQRLDVLIRGQPAGTVVDAKLPKAFFELYLGKTPVSMEAKHAFVKRVASLFS 147
BLAST of mRNA_F-serratus_M_contig10.57.1 vs. uniprot
Match: A0A7S2CCW4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CCW4_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 1.240e-17 Identity = 65/179 (36.31%), Postives = 93/179 (51.96%), Query Frame = 2 Query: 476 VDAATGLSLPRTKRFS--KSELACLGVGVRAKSIAIAKVNVYTVGLYVEPKGARRALRKYAGSDPASLRKDASVFKILGAAGFNKYLHLVFARKVGAKKVVEALTTVQGVSKDVLDRFSGIILDAVGGSINKGEAISL--GWEGQKMVVLVRDRPAGTVVDAALPEAVFALYLGDSPVS 1000 +D TG+ P +K F +L GVG RAK+ A V +Y G Y K + A K G V K + G + + L FA +GA KV EAL+ V GV+ DV+ F ++LD +GGS+ KGE+++L G G+ ++V VR + G + D AL + +YLG PVS Sbjct: 42 MDPGTGIEFPLSKSFDIGGGQLLLAGVGTRAKA---AVVKIYGAGYYASEKVLKEAATKSGGK---------GVAKEVIKGGGTQAVVLTFAMGIGAGKVAEALSGVGGVAPDVITTFQKLLLDGMGGSMKKGESMTLEFGPRGEVVLVTVRGKKVGEMKDKALHAGLKEMYLGAKPVS 208
BLAST of mRNA_F-serratus_M_contig10.57.1 vs. uniprot
Match: A0A2V0P369_9CHLO (Chalcone-flavonone isomerase family protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P369_9CHLO) HSP 1 Score: 78.2 bits (191), Expect = 1.780e-12 Identity = 65/214 (30.37%), Postives = 103/214 (48.13%), Query Frame = 2 Query: 449 ASAPLSKEIVDAATGLSLPRTKRF--SKSELACLGVGVRAKSI-AIAKVNVYTVGLYVEPKGARRALRKYAGSDPASLRKDASVFKIL-GAAGFNKYLHLVFARKVGAKKVVEALTTVQ---------GVSKDVLDRFSGIILDAVGGSINKGEAISLGWEGQ-KMVVLVRDRPAGTVVDAALPEAVFALYLGDSPVSPEAKAAFAEGLPAFLA 1048 A+ +K ++ATG++ P +K GVGVRAK I + +NVY +GLYV+ GA+RAL K+ G L + F L + F + L LV + GA K + + ++ +V+ +F + D V + KG + G+ K++ + + G + L A+F +YLG PVSP+AK +F GL + LA Sbjct: 64 AAGAFAKAQQESATGVAFPDNLCVLSNKHCPGLAGVGVRAKRILGLKNINVYALGLYVDAHGAKRALHKWKGCSADDLACNQKAFDALVSSESFERSLRLVIS--FGALKRQQFIHALEERLAPALKKAGKSEVMPQFERLF-DGV--TFKKGTLVDFSASGKGKLITKIDGKQVGAIESPELVRALFDIYLGKDPVSPDAKKSFGAGLASLLA 272 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig10.57.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig10.57.1 >prot_F-serratus_M_contig10.57.1 ID=prot_F-serratus_M_contig10.57.1|Name=mRNA_F-serratus_M_contig10.57.1|organism=Fucus serratus male|type=polypeptide|length=272bp MPSRKAGSLGVAVVFALVAVFLFFARDEHGSWRIGSLRLSPLAADEKYGPback to top mRNA from alignment at F-serratus_M_contig10:235076..237652- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig10.57.1 ID=mRNA_F-serratus_M_contig10.57.1|Name=mRNA_F-serratus_M_contig10.57.1|organism=Fucus serratus male|type=mRNA|length=2577bp|location=Sequence derived from alignment at F-serratus_M_contig10:235076..237652- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig10:235076..237652- >mRNA_F-serratus_M_contig10.57.1 ID=mRNA_F-serratus_M_contig10.57.1|Name=mRNA_F-serratus_M_contig10.57.1|organism=Fucus serratus male|type=CDS|length=1632bp|location=Sequence derived from alignment at F-serratus_M_contig10:235076..237652- (Fucus serratus male)back to top |