mRNA_F-serratus_M_contig10.57.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig10.57.1 vs. uniprot
Match: A0A7S0WAP9_9CRYP (Hypothetical protein n=2 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0WAP9_9CRYP) HSP 1 Score: 75.5 bits (184), Expect = 4.560e-12 Identity = 67/211 (31.75%), Postives = 97/211 (45.97%), Query Frame = 2 Query: 422 GRGSGGAEQASAPLSKEIVDAATGLSLPRTKRFSKSELACLGVGVRAKSIA-IAKVNVYTVGLYVEPKGARRALRKYAGSDPASLRKDASVFKILGAAGFNKYLHLVFARKVGAKKVVEALTT-----VQGVSKDVLDRFSGII--LDAVGGSINKGEAISLGWEGQKMVVLVRDRPAGTVVDAALPEAVFALYLGDSPVSPEAKAAFAEG 1030 G GSGG E ++ + + TG++ P + + L +G G R K I VNVY +G+YV+ +GA A K S+ A+ K+L F K L LV AR V A+K+ +AL V+G V + F G LD + + ++ G + V A L +A+F +YLGD PVS AK A A+G Sbjct: 4 GMGSGGGEPSA------VKEPITGITFPGSMQAGGKSLELMGCGERKKKIVGPVAVNVYAIGMYVD-QGAASAAGKGTSSEAAAA-------KVLSDGSFTKSLRLVMARTVNAEKIGDALAEQIEPRVRGTGAPV-EEFKGFFKGLD----KLENQQVVTFTQSGTTLAVSAPGNRTSQFNSAPLCKALFDIYLGDKPVSDNAKRAMAQG 195
BLAST of mRNA_F-serratus_M_contig10.57.1 vs. uniprot
Match: A0A383W2M2_TETOB (Chalcone-flavonone isomerase family protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383W2M2_TETOB) HSP 1 Score: 76.6 bits (187), Expect = 4.830e-12 Identity = 59/179 (32.96%), Postives = 93/179 (51.96%), Query Frame = 2 Query: 545 GVGVRAKSI-AIAKVNVYTVGLYVEPKGARRALRKYAGSDPASLRKDASVF-KILGAAGFNKYLHLVFARKVGAKKVVEALTTVQGVSKDVLDR----------FSGIILDAVGGSINKGEAISLGWEGQKMVVLVRDRPAGTVVDAALPEAVFALYLGDSPVSPEAKAAFAEGLPAFL 1045 GVGVRAK I + +NVY+VG+YV+ GA++AL KY G D L + +F +++G F + L LV + G+ K + L ++ K L + F G+ D V A S +GQ +V + + G++ AL +A+F +Y+G PVS +AK + +GL A + Sbjct: 83 GVGVRAKRILGLKNINVYSVGMYVDAHGAKKALHKYKGEDVDELMGNQKLFDELVGDTHFERSLRLVIS--FGSLKRSQFLNALEERLKPELAKAKEAESTMKAFEGLF-DGVNFRRGTEIAFSTHHKGQ-LVTQIDGKQVGSIQSPALVKALFDIYVGPDPVSADAKKSIGKGLVALM 257
BLAST of mRNA_F-serratus_M_contig10.57.1 vs. uniprot
Match: A0A0G4I9G2_9ALVE (Chalcone_isomerase domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I9G2_9ALVE) HSP 1 Score: 76.6 bits (187), Expect = 4.590e-11 Identity = 58/185 (31.35%), Postives = 89/185 (48.11%), Query Frame = 2 Query: 473 IVDAATGLSLPRTKRFSKS---ELACLGVGVRAKSIAIAKVNVYTVGLYVEPKGARRALRKYAGSDPASLRKDASVFKIL-GAAGFNKYLHLVFARKVGAKKVVEALTTV-QGVSKDVLDRFSGIILDAVGGSINKGEAISLGWEGQKMVVLVRDRPAGTVVDAALPEAVFALYLGDSPVSPEAK 1012 + D+ATG+ +T S + +G+GVR+KS+ + VNVYTVGLYV+P A L G L D K+L G L L AR + K++ +AL+ + D F + ++VG S++K + + L W ++ + DAA+ VF L+LG + VSP K Sbjct: 357 MKDSATGVEYKKTDTLKLSGGKNMWLMGLGVRSKSVVVTTVNVYTVGLYVDPVLASVGLE---GVSSKGLPADEFYEKLLQGPPAAPMILKLHMARGIKVKQLTDALSDLGXXXXXXAKDTFIETVKNSVGSSVDKDDEVELSWLHPDVIAVSGKSGTNQQEDAAVARGVFNLFLGSNAVSPALK 538
BLAST of mRNA_F-serratus_M_contig10.57.1 vs. uniprot
Match: A0A7S1DPI2_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1DPI2_HEMAN) HSP 1 Score: 72.4 bits (176), Expect = 4.690e-11 Identity = 62/198 (31.31%), Postives = 90/198 (45.45%), Query Frame = 2 Query: 464 SKEIVDAATGLSLPRTKRFSKSELACLGVGVRAKSIA-IAKVNVYTVGLYVEPKGARRALRKYAGSDPASLRKDASVFKILGAAGFNKYLHLVFARKVGAKKVVEALTT-----VQGVSKDVLDRFSGII--LDAVGGSINKGEAISLGWEGQKMVVLVRDRPAGTVVDAALPEAVFALYLGDSPVSPEAKAAFAEGL 1033 SKE+ + TG++ P + + L +G G R K I VNVY +G+YV+ +G K A S+ A+ K+L F K L LV AR V A+++ +AL V+G V + F G LD + + + G + V A L +A+F +YLGD PVS AK A +GL Sbjct: 6 SKEVKEPVTGITFPGSIQAGGKSLELMGCGERKKKIVGPVAVNVYAIGMYVD-QGPAIVAGKGASSEAAAA-------KVLSDGSFTKSLRLVMARTVNAERIGDALAEQIVPRVKGTGAPV-EEFKGFFKGLD----KLENQQVVIFTQSGSTLAVSAPGNRTSQFNSAPLCKALFDIYLGDKPVSDNAKKAMTQGL 190
BLAST of mRNA_F-serratus_M_contig10.57.1 vs. uniprot
Match: A0A7S2TLZ2_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TLZ2_9EUKA) HSP 1 Score: 73.2 bits (178), Expect = 1.180e-10 Identity = 77/260 (29.62%), Postives = 112/260 (43.08%), Query Frame = 2 Query: 284 ALVAVFLFFARDEHGSWRIGSLRLSPLAADEKYGPTDPSGVVARASGRGSGGAEQASAPLSKEIVDAATGLSLP-RTKRFSKSELACLGVGVRAKSIAIAKVNVYTVGLYVEPKGARRALRKYAGSDPASLRKDASVF-KILGAAGFNKYLHLVFARKVGAKKVVEALTTVQGVS--KDVLDRFSGIILDAVG--GSINKGEAISLGWEGQKMVVLVRDRPAGTVVDAALPEAVFALYLGDSP-VSPEAKAAFAEGLPAF 1042 AL + L+ A G S P+A YG GVV GG +AP+ + I S P +K S LGV +R K + VY VGLYV P GAR ALR++ G SLR ++ + K+ A+ F K L L F R VG +K+++ V K + + I+ D V G ++ G+ + E + + V ++PA L ++ LY G P V + K E +PA Sbjct: 55 ALTLLVLYLAVKALGP----SAETVPVAPSADYGK----GVVR-------GGYRWPTAPMIEPISKT----SFPFESKGLSSDAGMLLGVAIRLKKVVGVNFKVYAVGLYVNPAGARSALREHHGESLESLRANSKFYAKMTDASNFRKTLELRFLRHVGKEKLIDTFNEGLAVRMRKALGTKGVEIVDDFVKHFGDMSAGQTLIFHIERGALSIKVHEQPAVKFFSPELASSMLDLYFGAEPTVGEDVKKNLIERVPAL 295
BLAST of mRNA_F-serratus_M_contig10.57.1 vs. uniprot
Match: A0A6V3K976_9EUKA (Hypothetical protein n=2 Tax=Lotharella globosa TaxID=91324 RepID=A0A6V3K976_9EUKA) HSP 1 Score: 71.2 bits (173), Expect = 4.710e-10 Identity = 60/206 (29.13%), Postives = 94/206 (45.63%), Query Frame = 2 Query: 473 IVDAATGLSLP-RTKRFSKSELACLGVGVRAKSIAIAKVNVYTVGLYVEPKGARRALRKYAGSDPASLRKDASVF-KILGAAGFNKYLHLVFARKVGAKKVVEALTT-----------VQGVS--KDVLDRFSGIILDAVGGSINKGEAISLGWEGQKMVVLVRDRPAGTVVDAALPEAVFALYLGDSP-VSPEAKAAFAEGLPAF 1042 +V+ + S P +K S LGV +R K + VY VGLYV P GAR AL+++ G SLR ++ +F K+ + F K L L F R VG +K+VE +QGV+ ++ L+ F G ++ G+ + E + + V ++ A L ++ LY G+ P V + K E +PA Sbjct: 90 MVEPISKTSFPFESKGLSPEAGMLLGVAIRLKKVVGVNFKVYAVGLYVNPAGARSALKEHQGEALDSLRTNSKLFSKMTNSNNFRKTLELRFLRSVGKEKLVETFNEGLAVRMRKALGMQGVTIVEEFLNHF---------GDMSAGQTLIFHIEKGSLSIKVHNKEAVKFSSPELASSMLDLYFGEQPTVGEDVKKNLIERVPAL 286
BLAST of mRNA_F-serratus_M_contig10.57.1 vs. uniprot
Match: B8C2M0_THAPS (Chalcone_isomerase domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C2M0_THAPS) HSP 1 Score: 68.2 bits (165), Expect = 1.950e-9 Identity = 53/156 (33.97%), Postives = 78/156 (50.00%), Query Frame = 2 Query: 587 NVYTVGLYVEPKGARRALRKYAGSDPASLRKDASVFKILGAAGFNKYLHLVFARKVGAKKVVEALTTV--QGVSKDVLDRFSGIILDAVGGSI-NKGEAISLGWEGQKMVVLVRDRPAGTVVDA-ALPEAVFALYLGDSPVSPEAKAAFAEGLPAF 1042 VY VG+Y E K ++ ++Y P +L +D S K K L L F R+V + V EAL V K D F IL+ +GG I KG I + +G+K+ + A + ++ L A+F +YLGD+PVS +AK FA+G + Sbjct: 69 KVYGVGIYGEEKTVQKLKKQYTTEIPPALFEDFSQSKAA------KTLLLRFHREVASSDVAEALGEALKPKVGKQTSDAFETFILNMIGGDILAKGSDIFIACKGEKVTASLTGGNASSSMNVKGLCPAIFMVYLGDNPVSQQAKEGFAKGFSSM 218
BLAST of mRNA_F-serratus_M_contig10.57.1 vs. uniprot
Match: A0A6V3K7S7_9EUKA (Hypothetical protein n=4 Tax=Lotharella globosa TaxID=91324 RepID=A0A6V3K7S7_9EUKA) HSP 1 Score: 68.2 bits (165), Expect = 7.580e-9 Identity = 55/189 (29.10%), Postives = 87/189 (46.03%), Query Frame = 2 Query: 473 IVDAATGLSLP-RTKRFSKSELACLGVGVRAKSIAIAKVNVYTVGLYVEPKGARRALRKYAGSDPASLRKDASVF-KILGAAGFNKYLHLVFARKVGAKKVVEALTT-----------VQGVS--KDVLDRFSGIILDAVGGSINKGEAISLGWEGQKMVVLVRDRPAGTVVDAALPEAVFALYLGDSP 994 +V+ + S P +K S LGV +R K + VY VGLYV P GAR AL+++ G SLR ++ +F K+ + F K L L F R VG +K+VE +QGV+ ++ L+ F G ++ G+ + E + + V ++ A L ++ LY G+ P Sbjct: 90 MVEPISKTSFPFESKGLSPEAGMLLGVAIRLKKVVGVNFKVYAVGLYVNPAGARSALKEHQGEALDSLRTNSKLFSKMTNSNNFRKTLELRFLRSVGKEKLVETFNEGLAVRMRKALGMQGVTIVEEFLNHF---------GDMSAGQTLIFHIEKGSLSIKVHNKEAVKFSSPELASSMLDLYFGEQP 269
BLAST of mRNA_F-serratus_M_contig10.57.1 vs. uniprot
Match: A0A6U4UE85_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4UE85_HEMAN) HSP 1 Score: 62.4 bits (150), Expect = 3.370e-7 Identity = 57/187 (30.48%), Postives = 86/187 (45.99%), Query Frame = 2 Query: 518 FSKSELACLGVGVRAKSIAIAKVNVYTVGLYVEPKGARRALRKYAGSDPASLRKDASVFK-ILGAAGFNKYLHLVFARKVGAKKVVEALTTVQGVSKDVLDRFSGIILDAVGG--------SINKGEAISLGWE-GQKMVVLVRDRPAGTVVDAALPEAVFALYLGDSPVSPEAKAAFAEGLPAFLA 1048 F ELA G +R K IA + VY VGLYV+PK L+ + + L KD+++F+ +L K L LV R V +++ A++ + V + G A G S+ G I W G K+ V + + AG + AL ++F ++LG+ V +AA E LP LA Sbjct: 87 FQGHELA--GTAIRVKKIAFVPIQVYAVGLYVDPKSLGE-LKAWKARSHSDLSKDSALFRALLKDNKLTKTLRLVMVRTVTGEQMGSAIS--EAVESRLPHNQDGECKQAFAGLKGMFSAPSLKTGTEILFRWSPGGKLGVTMDGKDAGLLSSEALAASLFDVFLGEKAVVE--RAALIERLPDLLA 266
BLAST of mRNA_F-serratus_M_contig10.57.1 vs. uniprot
Match: A0A7R9TPS4_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TPS4_9VIRI) HSP 1 Score: 58.5 bits (140), Expect = 3.330e-6 Identity = 61/195 (31.28%), Postives = 86/195 (44.10%), Query Frame = 2 Query: 533 LACLGVGVRAKSIAIAKVNVYTVGLYVEPKGARRALRKYAGSDPASL-----RKDASVFKILGAAGFNKYLHLVFARKVGAKKVVEALTTVQGVSKDVLDRFSGII-------LDAV---------GGSINKGEAISLGWEGQ-KMVVLVRDRPAGTVVDAALPE---AVFALYLGDSPVSPEAKAAFAEGLPAF 1042 LA G G RAK IA VNVY + LY++ A RA R AG+ L + + + G + L A + ++ L T + S D + + LDA+ GG + KG+ I L W G+ V V P+G VD + E A+FA+YL +S V+PEA+ AF L A Sbjct: 18 LAFAGCGARAKKIAFLSVNVYALALYMDAD-AWRAQRGDAGASAGGLLNAPCERAVLIEMVRGVDADTFWEALREALEPRIAEIATWLATAETESGDFMASTAEAAEVKEEAALDALDEMKAFFRAGGELKKGDRIELRWGGRGSAAVSVSASPSGRSVDLSSEEFGRALFAVYLDESAVAPEARDAFDGALGAL 211 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig10.57.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig10.57.1 >prot_F-serratus_M_contig10.57.1 ID=prot_F-serratus_M_contig10.57.1|Name=mRNA_F-serratus_M_contig10.57.1|organism=Fucus serratus male|type=polypeptide|length=272bp MPSRKAGSLGVAVVFALVAVFLFFARDEHGSWRIGSLRLSPLAADEKYGPback to top mRNA from alignment at F-serratus_M_contig10:235076..237652- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig10.57.1 ID=mRNA_F-serratus_M_contig10.57.1|Name=mRNA_F-serratus_M_contig10.57.1|organism=Fucus serratus male|type=mRNA|length=2577bp|location=Sequence derived from alignment at F-serratus_M_contig10:235076..237652- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig10:235076..237652- >mRNA_F-serratus_M_contig10.57.1 ID=mRNA_F-serratus_M_contig10.57.1|Name=mRNA_F-serratus_M_contig10.57.1|organism=Fucus serratus male|type=CDS|length=1632bp|location=Sequence derived from alignment at F-serratus_M_contig10:235076..237652- (Fucus serratus male)back to top |