mRNA_F-distichus_contig105683.482.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig105683.482.1 vs. uniprot
Match: D8LEC5_ECTSI (Tup_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEC5_ECTSI) HSP 1 Score: 211 bits (536), Expect = 1.020e-60 Identity = 111/145 (76.55%), Postives = 121/145 (83.45%), Query Frame = 1
Query: 1 AIPAELSYEVRYEVDTGADRDRDRGRRGAG--GLAVELAKSQDLRSVVCCVRFSTDGTKVAAGSHSCVKVFDVLTFRQLYVCRKQVQETQGDPEA----DPYVRAVCFSPDGLSIVAGMERNSARVLLLEEGGGRQGPITLAGHE 417
AIPAELSY+VRYE + G GR A GLAVELAKSQDLRSVVCCVRFSTDGTK+AAGSHSCVKVFDV +F+QLYVCRKQVQE QG P+ DPYVRAVCFSPDGLSIVAGME+NSA+VL+LEE GGRQG ITL+GHE
Sbjct: 446 AIPAELSYQVRYEAEEGEG-----GRAAAAKDGLAVELAKSQDLRSVVCCVRFSTDGTKIAAGSHSCVKVFDVNSFKQLYVCRKQVQEEQGAPQTADGGDPYVRAVCFSPDGLSIVAGMEKNSAKVLVLEEEGGRQGAITLSGHE 585
BLAST of mRNA_F-distichus_contig105683.482.1 vs. uniprot
Match: A0A835Z1H0_9STRA (TUP1-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1H0_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 8.900e-21 Identity = 57/111 (51.35%), Postives = 64/111 (57.66%), Query Frame = 1
Query: 97 AVELAKSQDLRSVVCCVRFSTDGTKVAAGSHSCVKVFDVLTFRQLYVCRKQVQETQG----DPEADPYVRAVCFSPDGLSIVAGMERNSARVLLLEEGGGRQGPITLAGHE 417
AVEL L SVVCCVRFS DG+++A GSH CVKVFDV T C P DPYVR+VC SPDG + A ME NSARVL L E G P+ L GH+
Sbjct: 9 AVELEGCLSLGSVVCCVRFSPDGSRLATGSHGCVKVFDVATG-----CSPAPPSPPPLVPLPPPKDPYVRSVCMSPDGERVAAVMENNSARVLSLMEDG--PAPLDLVGHQ 112
BLAST of mRNA_F-distichus_contig105683.482.1 vs. uniprot
Match: A0A6G0WAY6_9STRA (Tup_N domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WAY6_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 1.840e-18 Identity = 52/136 (38.24%), Postives = 74/136 (54.41%), Query Frame = 1
Query: 10 AELSYEVRYEVDTGADRDRDRGRRGAGGLAVELAKSQDLRSVVCCVRFSTDGTKVAAGSHSCVKVFDVLT-FRQLYVCRKQVQETQGDPEADPYVRAVCFSPDGLSIVAGMERNSARVLLLEEGGGRQGPITLAGH 414
+++ + Y +D D G R A ++L + D SVVCCVRFS+DG +A GSH +VFDV + R + R E D YVRAVCFSPDG +VAGM +++ R+ + + G P++L GH
Sbjct: 233 SKIKWTFTYASRPSSDSSNDPGDRPA----LDLVHTIDHTSVVCCVRFSSDGRYLATGSHETAQVFDVQSGARTFWAQRPXXXXXXXXSEEDAYVRAVCFSPDGTKLVAGMPQHTVRLWDMHKDEGSSSPLSLVGH 364
BLAST of mRNA_F-distichus_contig105683.482.1 vs. uniprot
Match: W4HAK2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HAK2_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 2.810e-18 Identity = 47/90 (52.22%), Postives = 61/90 (67.78%), Query Frame = 1
Query: 100 VELAKSQDLRSVVCCVRFSTDGTKVAAGSHSCVKVFDVLT-FRQLYVCRKQVQE--TQGDPEADPYVRAVCFSPDGLSIVAGMERNSARV 360
VE+ + D +SVVCCVRFS DGTK+A+G H +VFDV T R +V R ++E Q + D YVRAVCFSPDG +VAGM +N+ R+
Sbjct: 471 VEMFHTLDHQSVVCCVRFSADGTKLASGCHKTAQVFDVQTGARTFWVQRPAIKEGAAQANEAEDAYVRAVCFSPDGTKLVAGMPQNTIRI 560
BLAST of mRNA_F-distichus_contig105683.482.1 vs. uniprot
Match: A0A024UU52_9STRA (Tup_N domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UU52_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 4.900e-18 Identity = 47/90 (52.22%), Postives = 60/90 (66.67%), Query Frame = 1
Query: 100 VELAKSQDLRSVVCCVRFSTDGTKVAAGSHSCVKVFDVLT-FRQLYVCRKQVQETQG--DPEADPYVRAVCFSPDGLSIVAGMERNSARV 360
VE+ + D +SVVCCVRFS DGTK+A G H +VFDV T R +V R ++ET + D YVRAVCFSPDG +VAGM +N+ R+
Sbjct: 406 VEMFHTLDHQSVVCCVRFSADGTKLATGCHKTAQVFDVQTGARTFWVQRPAIKETAAPANEAEDAYVRAVCFSPDGTKLVAGMPQNTIRI 495
BLAST of mRNA_F-distichus_contig105683.482.1 vs. uniprot
Match: A0A485LC03_9STRA (Aste57867_18943 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LC03_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 4.960e-18 Identity = 45/91 (49.45%), Postives = 60/91 (65.93%), Query Frame = 1
Query: 97 AVELAKSQDLRSVVCCVRFSTDGTKVAAGSHSCVKVFDVLTFRQLYVCRKQVQE---TQGDPEADPYVRAVCFSPDGLSIVAGMERNSARV 360
AVE+ + D +SVVCCVRFS DGTK+A+G H +VFDV T + + ++ TQ + D YVRAVCFSPDG +VAGM +N+ R+
Sbjct: 493 AVEMFHTLDHQSVVCCVRFSADGTKLASGCHKTAQVFDVQTGARTFWVQRPANGANVTQANETEDAYVRAVCFSPDGTKLVAGMPQNTIRI 583
BLAST of mRNA_F-distichus_contig105683.482.1 vs. uniprot
Match: A0A418BA83_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418BA83_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 5.210e-18 Identity = 47/90 (52.22%), Postives = 60/90 (66.67%), Query Frame = 1
Query: 100 VELAKSQDLRSVVCCVRFSTDGTKVAAGSHSCVKVFDVLT-FRQLYVCRKQVQETQG--DPEADPYVRAVCFSPDGLSIVAGMERNSARV 360
VE+ + D +SVVCCVRFS DGTK+A G H +VFDV T R +V R ++ET + D YVRAVCFSPDG +VAGM +N+ R+
Sbjct: 470 VEMFHTLDHQSVVCCVRFSADGTKLATGCHKTAQVFDVQTGARTFWVQRPAIKETAAPANEAEDAYVRAVCFSPDGTKLVAGMPQNTIRI 559
BLAST of mRNA_F-distichus_contig105683.482.1 vs. uniprot
Match: A0A024US84_9STRA (Leucine-rich repeat and WD repeat-containing protein 1 n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024US84_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 5.240e-18 Identity = 47/90 (52.22%), Postives = 60/90 (66.67%), Query Frame = 1
Query: 100 VELAKSQDLRSVVCCVRFSTDGTKVAAGSHSCVKVFDVLT-FRQLYVCRKQVQETQG--DPEADPYVRAVCFSPDGLSIVAGMERNSARV 360
VE+ + D +SVVCCVRFS DGTK+A G H +VFDV T R +V R ++ET + D YVRAVCFSPDG +VAGM +N+ R+
Sbjct: 1351 VEMFHTLDHQSVVCCVRFSADGTKLATGCHKTAQVFDVQTGARTFWVQRPAIKETAAPANEAEDAYVRAVCFSPDGTKLVAGMPQNTIRI 1440
BLAST of mRNA_F-distichus_contig105683.482.1 vs. uniprot
Match: A0A067CVT3_SAPPC (Tup_N domain-containing protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CVT3_SAPPC) HSP 1 Score: 89.0 bits (219), Expect = 6.710e-18 Identity = 51/110 (46.36%), Postives = 67/110 (60.91%), Query Frame = 1
Query: 100 VELAKSQDLRSVVCCVRFSTDGTKVAAGSHSCVKVFDVLT-FRQLYVCRKQVQETQG---DPEADPYVRAVCFSPDGLSIVAGMERNSARVLLLEEGGGRQGPITLAGHE 417
VE+ + D +SVVCCVRFS DGTK+A+G H +VFDV T R +V R + G + D YVR+VCFSPDG +VAGM +N+ R+ + +GP L GHE
Sbjct: 430 VEMHHTLDHQSVVCCVRFSADGTKMASGCHKTAQVFDVATGARTFWVQRPAITNANGAQPNENEDAYVRSVCFSPDGTKLVAGMPQNTIRIWDIASN--EEGP-PLVGHE 536
BLAST of mRNA_F-distichus_contig105683.482.1 vs. uniprot
Match: A0A6A5ABM5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5ABM5_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 1.600e-17 Identity = 46/90 (51.11%), Postives = 60/90 (66.67%), Query Frame = 1
Query: 100 VELAKSQDLRSVVCCVRFSTDGTKVAAGSHSCVKVFDVLT-FRQLYVCRKQVQE--TQGDPEADPYVRAVCFSPDGLSIVAGMERNSARV 360
VE+ + D +SVVCCVRFS DGTK+A+G H +VFDV T R +V R ++E + D YVRAVCFSPDG +VAGM +N+ R+
Sbjct: 222 VEMFHTLDHQSVVCCVRFSADGTKLASGCHKTAQVFDVQTGARTFWVQRPAIKEGAAPANEAEDAYVRAVCFSPDGTKLVAGMPQNTIRI 311 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig105683.482.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig105683.482.1 >prot_F-distichus_contig105683.482.1 ID=prot_F-distichus_contig105683.482.1|Name=mRNA_F-distichus_contig105683.482.1|organism=Fucus distichus monoicous|type=polypeptide|length=139bp AIPAELSYEVRYEVDTGADRDRDRGRRGAGGLAVELAKSQDLRSVVCCVRback to top mRNA from alignment at F-distichus_contig105683:383..1956- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig105683.482.1 ID=mRNA_F-distichus_contig105683.482.1|Name=mRNA_F-distichus_contig105683.482.1|organism=Fucus distichus monoicous|type=mRNA|length=1574bp|location=Sequence derived from alignment at F-distichus_contig105683:383..1956- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig105683:383..1956- >mRNA_F-distichus_contig105683.482.1 ID=mRNA_F-distichus_contig105683.482.1|Name=mRNA_F-distichus_contig105683.482.1|organism=Fucus distichus monoicous|type=CDS|length=834bp|location=Sequence derived from alignment at F-distichus_contig105683:383..1956- (Fucus distichus monoicous)back to top |