prot_F-distichus_contig105683.482.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-distichus_contig105683.482.1
Unique Name	prot_F-distichus_contig105683.482.1
Type	polypeptide
Organism	Fucus distichus monoicous (Fucus distichus monoicous)
Sequence length	139

Homology

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BLAST of mRNA_F-distichus_contig105683.482.1 vs. uniprot
Match: D8LEC5_ECTSI (Tup_N domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEC5_ECTSI)

HSP 1 Score: 211 bits (536), Expect = 1.020e-60
Identity = 111/145 (76.55%), Postives = 121/145 (83.45%), Query Frame = 0

Query:    1 AIPAELSYEVRYEVDTGADRDRDRGRRGAG--GLAVELAKSQDLRSVVCCVRFSTDGTKVAAGSHSCVKVFDVLTFRQLYVCRKQVQETQGDPEA----DPYVRAVCFSPDGLSIVAGMERNSARVLLLEEGGGRQGPITLAGHE 139
            AIPAELSY+VRYE + G       GR  A   GLAVELAKSQDLRSVVCCVRFSTDGTK+AAGSHSCVKVFDV +F+QLYVCRKQVQE QG P+     DPYVRAVCFSPDGLSIVAGME+NSA+VL+LEE GGRQG ITL+GHE
Sbjct:  446 AIPAELSYQVRYEAEEGEG-----GRAAAAKDGLAVELAKSQDLRSVVCCVRFSTDGTKIAAGSHSCVKVFDVNSFKQLYVCRKQVQEEQGAPQTADGGDPYVRAVCFSPDGLSIVAGMEKNSAKVLVLEEEGGRQGAITLSGHE 585

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BLAST of mRNA_F-distichus_contig105683.482.1 vs. uniprot
Match: A0A835Z1H0_9STRA (TUP1-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1H0_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 8.900e-21
Identity = 57/111 (51.35%), Postives = 64/111 (57.66%), Query Frame = 0

Query:   33 AVELAKSQDLRSVVCCVRFSTDGTKVAAGSHSCVKVFDVLTFRQLYVCRKQVQETQG----DPEADPYVRAVCFSPDGLSIVAGMERNSARVLLLEEGGGRQGPITLAGHE 139
            AVEL     L SVVCCVRFS DG+++A GSH CVKVFDV T      C              P  DPYVR+VC SPDG  + A ME NSARVL L E G    P+ L GH+
Sbjct:    9 AVELEGCLSLGSVVCCVRFSPDGSRLATGSHGCVKVFDVATG-----CSPAPPSPPPLVPLPPPKDPYVRSVCMSPDGERVAAVMENNSARVLSLMEDG--PAPLDLVGHQ 112

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BLAST of mRNA_F-distichus_contig105683.482.1 vs. uniprot
Match: A0A6G0WAY6_9STRA (Tup_N domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WAY6_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 1.840e-18
Identity = 52/136 (38.24%), Postives = 74/136 (54.41%), Query Frame = 0

Query:    4 AELSYEVRYEVDTGADRDRDRGRRGAGGLAVELAKSQDLRSVVCCVRFSTDGTKVAAGSHSCVKVFDVLT-FRQLYVCRKQVQETQGDPEADPYVRAVCFSPDGLSIVAGMERNSARVLLLEEGGGRQGPITLAGH 138
            +++ +   Y     +D   D G R A    ++L  + D  SVVCCVRFS+DG  +A GSH   +VFDV +  R  +  R          E D YVRAVCFSPDG  +VAGM +++ R+  + +  G   P++L GH
Sbjct:  233 SKIKWTFTYASRPSSDSSNDPGDRPA----LDLVHTIDHTSVVCCVRFSSDGRYLATGSHETAQVFDVQSGARTFWAQRPXXXXXXXXSEEDAYVRAVCFSPDGTKLVAGMPQHTVRLWDMHKDEGSSSPLSLVGH 364

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BLAST of mRNA_F-distichus_contig105683.482.1 vs. uniprot
Match: W4HAK2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HAK2_9STRA)

HSP 1 Score: 90.1 bits (222), Expect = 2.810e-18
Identity = 47/90 (52.22%), Postives = 61/90 (67.78%), Query Frame = 0

Query:   34 VELAKSQDLRSVVCCVRFSTDGTKVAAGSHSCVKVFDVLT-FRQLYVCRKQVQE--TQGDPEADPYVRAVCFSPDGLSIVAGMERNSARV 120
            VE+  + D +SVVCCVRFS DGTK+A+G H   +VFDV T  R  +V R  ++E   Q +   D YVRAVCFSPDG  +VAGM +N+ R+
Sbjct: 1196 VEMFHTLDHQSVVCCVRFSADGTKLASGCHKTAQVFDVQTGARTFWVQRPAIKEGAAQANEAEDAYVRAVCFSPDGTKLVAGMPQNTIRI 1285

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BLAST of mRNA_F-distichus_contig105683.482.1 vs. uniprot
Match: A0A024UU52_9STRA (Tup_N domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UU52_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 4.900e-18
Identity = 47/90 (52.22%), Postives = 60/90 (66.67%), Query Frame = 0

Query:   34 VELAKSQDLRSVVCCVRFSTDGTKVAAGSHSCVKVFDVLT-FRQLYVCRKQVQETQG--DPEADPYVRAVCFSPDGLSIVAGMERNSARV 120
            VE+  + D +SVVCCVRFS DGTK+A G H   +VFDV T  R  +V R  ++ET    +   D YVRAVCFSPDG  +VAGM +N+ R+
Sbjct:  406 VEMFHTLDHQSVVCCVRFSADGTKLATGCHKTAQVFDVQTGARTFWVQRPAIKETAAPANEAEDAYVRAVCFSPDGTKLVAGMPQNTIRI 495

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BLAST of mRNA_F-distichus_contig105683.482.1 vs. uniprot
Match: A0A485LC03_9STRA (Aste57867_18943 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LC03_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 4.960e-18
Identity = 45/91 (49.45%), Postives = 60/91 (65.93%), Query Frame = 0

Query:   33 AVELAKSQDLRSVVCCVRFSTDGTKVAAGSHSCVKVFDVLTFRQLYVCRKQVQE---TQGDPEADPYVRAVCFSPDGLSIVAGMERNSARV 120
            AVE+  + D +SVVCCVRFS DGTK+A+G H   +VFDV T  + +  ++       TQ +   D YVRAVCFSPDG  +VAGM +N+ R+
Sbjct:  493 AVEMFHTLDHQSVVCCVRFSADGTKLASGCHKTAQVFDVQTGARTFWVQRPANGANVTQANETEDAYVRAVCFSPDGTKLVAGMPQNTIRI 583

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BLAST of mRNA_F-distichus_contig105683.482.1 vs. uniprot
Match: A0A418BA83_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418BA83_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 5.210e-18
Identity = 47/90 (52.22%), Postives = 60/90 (66.67%), Query Frame = 0

Query:   34 VELAKSQDLRSVVCCVRFSTDGTKVAAGSHSCVKVFDVLT-FRQLYVCRKQVQETQG--DPEADPYVRAVCFSPDGLSIVAGMERNSARV 120
            VE+  + D +SVVCCVRFS DGTK+A G H   +VFDV T  R  +V R  ++ET    +   D YVRAVCFSPDG  +VAGM +N+ R+
Sbjct: 1225 VEMFHTLDHQSVVCCVRFSADGTKLATGCHKTAQVFDVQTGARTFWVQRPAIKETAAPANEAEDAYVRAVCFSPDGTKLVAGMPQNTIRI 1314

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BLAST of mRNA_F-distichus_contig105683.482.1 vs. uniprot
Match: A0A024US84_9STRA (Leucine-rich repeat and WD repeat-containing protein 1 n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024US84_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 5.240e-18
Identity = 47/90 (52.22%), Postives = 60/90 (66.67%), Query Frame = 0

Query:   34 VELAKSQDLRSVVCCVRFSTDGTKVAAGSHSCVKVFDVLT-FRQLYVCRKQVQETQG--DPEADPYVRAVCFSPDGLSIVAGMERNSARV 120
            VE+  + D +SVVCCVRFS DGTK+A G H   +VFDV T  R  +V R  ++ET    +   D YVRAVCFSPDG  +VAGM +N+ R+
Sbjct: 1351 VEMFHTLDHQSVVCCVRFSADGTKLATGCHKTAQVFDVQTGARTFWVQRPAIKETAAPANEAEDAYVRAVCFSPDGTKLVAGMPQNTIRI 1440

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BLAST of mRNA_F-distichus_contig105683.482.1 vs. uniprot
Match: A0A067CVT3_SAPPC (Tup_N domain-containing protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CVT3_SAPPC)

HSP 1 Score: 89.0 bits (219), Expect = 6.710e-18
Identity = 51/110 (46.36%), Postives = 67/110 (60.91%), Query Frame = 0

Query:   34 VELAKSQDLRSVVCCVRFSTDGTKVAAGSHSCVKVFDVLT-FRQLYVCRKQVQETQG---DPEADPYVRAVCFSPDGLSIVAGMERNSARVLLLEEGGGRQGPITLAGHE 139
            VE+  + D +SVVCCVRFS DGTK+A+G H   +VFDV T  R  +V R  +    G   +   D YVR+VCFSPDG  +VAGM +N+ R+  +      +GP  L GHE
Sbjct:  430 VEMHHTLDHQSVVCCVRFSADGTKMASGCHKTAQVFDVATGARTFWVQRPAITNANGAQPNENEDAYVRSVCFSPDGTKLVAGMPQNTIRIWDIASN--EEGP-PLVGHE 536

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BLAST of mRNA_F-distichus_contig105683.482.1 vs. uniprot
Match: A0A6A5ABM5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5ABM5_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 1.600e-17
Identity = 46/90 (51.11%), Postives = 60/90 (66.67%), Query Frame = 0

Query:   34 VELAKSQDLRSVVCCVRFSTDGTKVAAGSHSCVKVFDVLT-FRQLYVCRKQVQE--TQGDPEADPYVRAVCFSPDGLSIVAGMERNSARV 120
            VE+  + D +SVVCCVRFS DGTK+A+G H   +VFDV T  R  +V R  ++E     +   D YVRAVCFSPDG  +VAGM +N+ R+
Sbjct:  222 VEMFHTLDHQSVVCCVRFSADGTKLASGCHKTAQVFDVQTGARTFWVQRPAIKEGAAPANEAEDAYVRAVCFSPDGTKLVAGMPQNTIRI 311

The following BLAST results are available for this feature:

BLAST of mRNA_F-distichus_contig105683.482.1 vs. uniprot

BLAST of mRNA_F-distichus_contig105683.482.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LEC5_ECTSI	1.020e-60	76.55	Tup_N domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A835Z1H0_9STRA	8.900e-21	51.35	TUP1-like protein (Fragment) n=1 Tax=Tribonema min...	[more]
A0A6G0WAY6_9STRA	1.840e-18	38.24	Tup_N domain-containing protein n=1 Tax=Aphanomyce...	[more]
W4HAK2_9STRA	2.810e-18	52.22	Uncharacterized protein n=1 Tax=Aphanomyces astaci...	[more]
A0A024UU52_9STRA	4.900e-18	52.22	Tup_N domain-containing protein n=1 Tax=Aphanomyce...	[more]
A0A485LC03_9STRA	4.960e-18	49.45	Aste57867_18943 protein n=1 Tax=Aphanomyces stella...	[more]
A0A418BA83_9STRA	5.210e-18	52.22	Uncharacterized protein n=1 Tax=Aphanomyces invada...	[more]
A0A024US84_9STRA	5.240e-18	52.22	Leucine-rich repeat and WD repeat-containing prote...	[more]
A0A067CVT3_SAPPC	6.710e-18	46.36	Tup_N domain-containing protein n=4 Tax=Saprolegni...	[more]
A0A6A5ABM5_9STRA	1.600e-17	51.11	Uncharacterized protein n=1 Tax=Aphanomyces astaci...	[more]

Pages

InterPro

Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 26..139 e-value: 1.1E-17 score: 65.7
None	No IPR available	PANTHER	PTHR42968	FAMILY NOT NAMED	coord: 32..138
None	No IPR available	PANTHER	PTHR42968:SF17	GENERAL TRANSCRIPTIONAL COREPRESSOR TUP1	coord: 32..138
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 38..124

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 26..139 e-value: 1.1E-17 score: 65.7
None	No IPR available	PANTHER	PTHR42968	FAMILY NOT NAMED	coord: 32..138
None	No IPR available	PANTHER	PTHR42968:SF17	GENERAL TRANSCRIPTIONAL COREPRESSOR TUP1	coord: 32..138
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 38..124

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-distichus_contig105683	contig	F-distichus_contig105683:383..1956 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Fucus distichus monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-distichus_contig105683.482.1	mRNA_F-distichus_contig105683.482.1	Fucus distichus monoicous	mRNA	F-distichus_contig105683 383..1956 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-distichus_contig105683.482.1 ID=prot_F-distichus_contig105683.482.1|Name=mRNA_F-distichus_contig105683.482.1|organism=Fucus distichus monoicous|type=polypeptide|length=139bp
AIPAELSYEVRYEVDTGADRDRDRGRRGAGGLAVELAKSQDLRSVVCCVR
FSTDGTKVAAGSHSCVKVFDVLTFRQLYVCRKQVQETQGDPEADPYVRAV
CFSPDGLSIVAGMERNSARVLLLEEGGGRQGPITLAGHE

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR036322	WD40_repeat_dom_sf