prot_F-distichus_contig1055.475.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig1055.475.1
Unique Nameprot_F-distichus_contig1055.475.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length710
Homology
BLAST of mRNA_F-distichus_contig1055.475.1 vs. uniprot
Match: D8LLH7_ECTSI (PINc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLH7_ECTSI)

HSP 1 Score: 266 bits (679), Expect = 7.460e-76
Identity = 160/344 (46.51%), Postives = 210/344 (61.05%), Query Frame = 0
Query:  381 DAVHGAR-TSGIKIPRDQDEDKLAEITSKIIALDLNTTTKSTVQEAPADVPS-------KAYMSLEEYKAAEKAGDVV-YKGKS--TVDELYASGKAYNSATRRWIKVENAKKKAAIDAAPALLANVAMLENTVKLLSQRSQLXXXXXXXXTEQSGRPTATLAAPTAPKLIVFDTNCFINSLCGIKCRVANIVATETDTSILIPKAVLTELDGLK---RNDTRGFMAREATRYLMSLLQT-LE-GREYPLARFQGDTELYRDDGHHKAPENLRGDASILNSCLFFAHGIKTPRKVTLVTGDNNFGMQAKANCFGVEGNPQCLAERCPRPFCPVKSRQQSLRGSF 708
            DA  GAR T+ +  P  + +D++AE+ S++ AL+++    S   E    V +       KAY+SLEEYK A  +G++  YKG    TVD+ YA G AYN  TRRWIKV   +KK AI+A PALLA + ++E+  KL +QRSQL         ++  + T +LA PTAP L+ FDTN  I+ L    CRV++I   + DTS+LIPKAVLTELD LK   R++     A++A RY   L++  LE GRE+P+ R Q DTEL+RD+GHH  PE L GD SILN C+FF  GI TPRKVTLVTGDNNF ++A A+     G PQC    C  P CP   R       +
Sbjct:  293 DASAGARATTALMSPEQERDDEIAELASQLTALEIDAGKGSVDDEGKEKVANGGDAGKGKAYLSLEEYKEATASGEIKPYKGTKYQTVDDRYADGWAYNPTTRRWIKVACQEKKDAIEALPALLARLELMESRDKLATQRSQLLETKVEEIKKK--KDTVSLAMPTAPVLVAFDTNWLIHRLADTMCRVSDIAGRQKDTSVLIPKAVLTELDRLKTRGRDEATRSSAQKANRYFRGLVEKPLERGREFPVVRVQEDTELFRDNGHHSRPEGLGGDDSILNCCMFFTQGIDTPRKVTLVTGDNNFAIRATAHGLTTTGRPQCDPGHCRMPLCPAPPRPSPFSRGY 634          
BLAST of mRNA_F-distichus_contig1055.475.1 vs. uniprot
Match: A0A6H5JRN9_9PHAE (PINc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRN9_9PHAE)

HSP 1 Score: 258 bits (658), Expect = 5.500e-71
Identity = 152/325 (46.77%), Postives = 199/325 (61.23%), Query Frame = 0
Query:  399 EDKLAEITSKIIALDLNTTTKSTVQEAPADVPS-------KAYMSLEEYKAAEKAGDVV-YKGKS--TVDELYASGKAYNSATRRWIKVENAKKKAAIDAAPALLANVAMLENTVKLLSQRSQLXXXXXXXXTEQSGRPTATLAAPTAPKLIVFDTNCFINSLCGIKCRVANIVATETDTSILIPKAVLTELDGLK---RNDTRGFMAREATRYLMSLLQT-LE-GREYPLARFQGDTELYRDDGHHKAPENLRGDASILNSCLFFAHGIKTPRKVTLVTGDNNFGMQAKANCFGVEGNPQCLAERCPRPFCPVKSRQQSLRGSF 708
            +D++AE+ S++ AL+L+    S   +    V         KAY+SL+EYK A  +G++  YKG    TVD+ YA G AYN  TRRWIKV   +KK AI+A PALLA + ++E+  KL +QRSQL         ++  + T +LA PTAP L+ FDTN  I+ L    CRV++I   + DTS+LIPKAVLTELD LK   R++     A++A RY   L++  LE GRE+P+ R Q DTEL+RD+GHH  PE L GD SILN C+FF  GI TPRKVTLVTGDNNF ++A A+     G PQC    C  P CP   R       +
Sbjct:  549 DDEIAELASQLTALELDAGKGSVADKGKEKVADGDDAGKGKAYLSLKEYKEATASGEIKPYKGTKYQTVDDRYADGWAYNPTTRRWIKVACQEKKDAIEALPALLARLELMESRDKLATQRSQLLETKVEEIKKK--KDTVSLAVPTAPVLVAFDTNWLIHRLADTMCRVSDIAGRQKDTSVLIPKAVLTELDRLKTRGRDEATRSSAQKANRYFRGLVEKPLERGREFPVVRVQDDTELFRDNGHHSRPEGLGGDDSILNCCMFFTQGIDTPRKVTLVTGDNNFAIRATAHGLTTTGRPQCDPGHCRMPLCPAPPRPSPFSRGY 871          
BLAST of mRNA_F-distichus_contig1055.475.1 vs. uniprot
Match: A0A162WQ14_PHYB8 (PINc domain-containing protein n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A162WQ14_PHYB8)

HSP 1 Score: 58.2 bits (139), Expect = 2.770e-5
Identity = 44/139 (31.65%), Postives = 70/139 (50.36%), Query Frame = 0
Query:  538 KLIVFDTNCFINSLCGIKCRVANIVATETDTSILIPKAVLTELDGLK----RNDTRGFMAREATRYLMSLLQTLEGREYPLARFQGDTELYRDDGHHKAPENLRGDASILNSCLFFAHGIKTPRKVTLVTGDNNFGMQA 672
            ++IV DTN  I++L  ++  +          ++++P AV+ ELDGLK    R+   G    E  R +M  L+     + P  R Q   E+Y      KA + L GD SIL+ C++F H +   + VTL + D N  ++A
Sbjct:   72 QVIVLDTNFLISNLGYLQSLLTKTALHPNVITLVVPWAVVRELDGLKYAKSRDKNGGATLGELARTVMRFLEKELRNKTPCLRGQKSNEIYDP----KAKKAL-GDDSILDCCMYFMHSVS--KYVTLFSNDRNLSIKA 203          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig1055.475.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LLH7_ECTSI7.460e-7646.51PINc domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5JRN9_9PHAE5.500e-7146.77PINc domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A162WQ14_PHYB82.770e-531.65PINc domain-containing protein n=1 Tax=Phycomyces ... [more]
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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 496..523
NoneNo IPR availableGENE3D3.40.50.1010coord: 534..685
e-value: 1.5E-18
score: 69.0
IPR002716PIN domainSMARTSM00670PIN_9coord: 538..670
e-value: 7.3E-8
score: 42.1
IPR002716PIN domainPFAMPF13638PIN_4coord: 540..675
e-value: 3.4E-14
score: 53.3
IPR029060PIN-like domain superfamilySUPERFAMILY88723PIN domain-likecoord: 537..674

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 496..523
NoneNo IPR availableGENE3D3.40.50.1010coord: 534..685
e-value: 1.5E-18
score: 69.0
IPR002716PIN domainSMARTSM00670PIN_9coord: 538..670
e-value: 7.3E-8
score: 42.1
IPR002716PIN domainPFAMPF13638PIN_4coord: 540..675
e-value: 3.4E-14
score: 53.3
IPR029060PIN-like domain superfamilySUPERFAMILY88723PIN domain-likecoord: 537..674

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig1055contigF-distichus_contig1055:3512..7905 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig1055.475.1mRNA_F-distichus_contig1055.475.1Fucus distichus monoicousmRNAF-distichus_contig1055 1775..8009 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig1055.475.1 ID=prot_F-distichus_contig1055.475.1|Name=mRNA_F-distichus_contig1055.475.1|organism=Fucus distichus monoicous|type=polypeptide|length=710bp
MTTKVSDPRLKYHRTRALSEIKNQSDVDKSGLRGIWFAAKSSRPKGQALT
NTYSPPPAAPYPPIPAAAPTSIDVTFSTENVVPQSGVKVVPGGGHLQSWP
QPPPRQPPLPQESANGRISTHYSSDARNVGSYHVYNPAGGRWNVWTPPPP
APYPPLPRSAPGPVLVPNFPEDNQSSRGSPSAPPPRTIQPRERDPRPENE
HWLPPLPPPPYWKHPPELGAAMRPAHRQATEAPHGAQKSVTHDDKNGGRS
HPRGHQPMYRQDHHYKPAEERAPPQRSSRPPQGGASNLRPGPTGVCGAGR
QATEAPRGTQNSVINHDKNGSRSHMGGHQQMYRQYDHYRPAEEKAPPQRS
PRPSQGGVSYRQPGLTKVCGAGRDFTSGNDDAVHGARTSGIKIPRDQDED
KLAEITSKIIALDLNTTTKSTVQEAPADVPSKAYMSLEEYKAAEKAGDVV
YKGKSTVDELYASGKAYNSATRRWIKVENAKKKAAIDAAPALLANVAMLE
NTVKLLSQRSQLLENKAEMLTEQSGRPTATLAAPTAPKLIVFDTNCFINS
LCGIKCRVANIVATETDTSILIPKAVLTELDGLKRNDTRGFMAREATRYL
MSLLQTLEGREYPLARFQGDTELYRDDGHHKAPENLRGDASILNSCLFFA
HGIKTPRKVTLVTGDNNFGMQAKANCFGVEGNPQCLAERCPRPFCPVKSR
QQSLRGSFP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002716PIN_dom
IPR029060PIN-like_dom_sf