prot_F-distichus_contig104846.427.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-distichus_contig104846.427.1
Unique Name	prot_F-distichus_contig104846.427.1
Type	polypeptide
Organism	Fucus distichus monoicous (Fucus distichus monoicous)
Sequence length	71

Homology

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BLAST of mRNA_F-distichus_contig104846.427.1 vs. uniprot
Match: D7FSY5_ECTSI (Threonine--tRNA ligase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSY5_ECTSI)

HSP 1 Score: 139 bits (350), Expect = 1.150e-37
Identity = 66/68 (97.06%), Postives = 68/68 (100.00%), Query Frame = 0

Query:    3 RELPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQVEDEIISVLDLTEAILSRFGFDRR 70
            RELPIRWAE+GTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQ+EDEIISVLDLTEAILSRFGFDRR
Sbjct:  390 RELPIRWAEMGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLEDEIISVLDLTEAILSRFGFDRR 457

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BLAST of mRNA_F-distichus_contig104846.427.1 vs. uniprot
Match: A0A7R9WD93_9STRA (Threonine--tRNA ligase (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WD93_9STRA)

HSP 1 Score: 133 bits (335), Expect = 8.600e-37
Identity = 61/69 (88.41%), Postives = 68/69 (98.55%), Query Frame = 0

Query:    3 RELPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQVEDEIISVLDLTEAILSRFGFDRRD 71
            R+LPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLP+Q+EDEI++VLDLTE+ILSRFGFD+ D
Sbjct:  232 RDLPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPDQLEDEIVAVLDLTESILSRFGFDKYD 300

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BLAST of mRNA_F-distichus_contig104846.427.1 vs. uniprot
Match: A0A6H5JBI8_9PHAE (Threonine--tRNA ligase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBI8_9PHAE)

HSP 1 Score: 137 bits (345), Expect = 3.700e-36
Identity = 65/68 (95.59%), Postives = 67/68 (98.53%), Query Frame = 0

Query:    3 RELPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQVEDEIISVLDLTEAILSRFGFDRR 70
            R LPIRWAE+GTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQ+EDEIISVLDLTEAILSRFGFDRR
Sbjct:  389 RHLPIRWAEMGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLEDEIISVLDLTEAILSRFGFDRR 456

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BLAST of mRNA_F-distichus_contig104846.427.1 vs. uniprot
Match: A0A7S2G206_9STRA (Threonine--tRNA ligase (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G206_9STRA)

HSP 1 Score: 122 bits (306), Expect = 9.750e-35
Identity = 57/63 (90.48%), Postives = 60/63 (95.24%), Query Frame = 0

Query:    5 LPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQVEDEIISVLDLTEAILSRFGF 67
            LP RWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQ+ DEI+ VLDLTE+ILSRFGF
Sbjct:    1 LPKRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLTDEIVGVLDLTESILSRFGF 63

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BLAST of mRNA_F-distichus_contig104846.427.1 vs. uniprot
Match: A0A7S1GIN9_CYCTE (Threonine--tRNA ligase (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GIN9_CYCTE)

HSP 1 Score: 128 bits (321), Expect = 2.230e-34
Identity = 59/69 (85.51%), Postives = 64/69 (92.75%), Query Frame = 0

Query:    3 RELPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQVEDEIISVLDLTEAILSRFGFDRRD 71
            RELPIRW ELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQ++DEI+ VLDL E ILSRFGF++ D
Sbjct:   57 RELPIRWGELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLQDEIVGVLDLAEKILSRFGFNKYD 125

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BLAST of mRNA_F-distichus_contig104846.427.1 vs. uniprot
Match: A0A1Z5K8X1_FISSO (Threonine--tRNA ligase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K8X1_FISSO)

HSP 1 Score: 132 bits (331), Expect = 2.890e-34
Identity = 61/69 (88.41%), Postives = 65/69 (94.20%), Query Frame = 0

Query:    3 RELPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQVEDEIISVLDLTEAILSRFGFDRRD 71
            R+LP RWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQ+EDEI+ VLDLTE ILSRFGFD+ D
Sbjct:  373 RDLPFRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLEDEIVGVLDLTERILSRFGFDKYD 441

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BLAST of mRNA_F-distichus_contig104846.427.1 vs. uniprot
Match: B5Y5F7_PHATC (Threonine--tRNA ligase n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y5F7_PHATC)

HSP 1 Score: 131 bits (329), Expect = 5.660e-34
Identity = 60/69 (86.96%), Postives = 65/69 (94.20%), Query Frame = 0

Query:    3 RELPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQVEDEIISVLDLTEAILSRFGFDRRD 71
            R+LP RWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQ++DEI+ VLDLTE ILSRFGFD+ D
Sbjct:  379 RDLPFRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLQDEIVGVLDLTETILSRFGFDKYD 447

[Close]

BLAST of mRNA_F-distichus_contig104846.427.1 vs. uniprot
Match: A0A7S0D919_9EUKA (Threonine--tRNA ligase n=2 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0D919_9EUKA)

HSP 1 Score: 130 bits (327), Expect = 6.640e-34
Identity = 60/66 (90.91%), Postives = 64/66 (96.97%), Query Frame = 0

Query:    3 RELPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQVEDEIISVLDLTEAILSRFGFD 68
            RELPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLP Q+EDE++ VLDLTE+ILSRFGFD
Sbjct:  275 RELPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPNQLEDELVGVLDLTESILSRFGFD 340

[Close]

BLAST of mRNA_F-distichus_contig104846.427.1 vs. uniprot
Match: A0A7S3YRZ8_9EUKA (Threonine--tRNA ligase (Fragment) n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YRZ8_9EUKA)

HSP 1 Score: 127 bits (319), Expect = 6.200e-33
Identity = 58/65 (89.23%), Postives = 62/65 (95.38%), Query Frame = 0

Query:    3 RELPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQVEDEIISVLDLTEAILSRFGF 67
            RELPIRWAELGTVYRYERSGTLHGLMRVRGFTQDD HIFCLP Q+EDEI+ VLDLTE++LSRFGF
Sbjct:  295 RELPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDGHIFCLPSQLEDEIVGVLDLTESVLSRFGF 359

[Close]

BLAST of mRNA_F-distichus_contig104846.427.1 vs. uniprot
Match: A0A7S2MRP2_9STRA (Threonine--tRNA ligase n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MRP2_9STRA)

HSP 1 Score: 128 bits (321), Expect = 7.120e-33
Identity = 59/67 (88.06%), Postives = 64/67 (95.52%), Query Frame = 0

Query:    3 RELPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQVEDEIISVLDLTEAILSRFGFDR 69
            R+LPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQ+ DEI+ VLDLTE ILSRFGF++
Sbjct:  384 RDLPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQLTDEIVQVLDLTERILSRFGFEK 450

The following BLAST results are available for this feature:

BLAST of mRNA_F-distichus_contig104846.427.1 vs. uniprot

BLAST of mRNA_F-distichus_contig104846.427.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FSY5_ECTSI	1.150e-37	97.06	Threonine--tRNA ligase n=1 Tax=Ectocarpus siliculo...	[more]
A0A7R9WD93_9STRA	8.600e-37	88.41	Threonine--tRNA ligase (Fragment) n=1 Tax=Pseudict...	[more]
A0A6H5JBI8_9PHAE	3.700e-36	95.59	Threonine--tRNA ligase n=1 Tax=Ectocarpus sp. CCAP...	[more]
A0A7S2G206_9STRA	9.750e-35	90.48	Threonine--tRNA ligase (Fragment) n=1 Tax=Florenci...	[more]
A0A7S1GIN9_CYCTE	2.230e-34	85.51	Threonine--tRNA ligase (Fragment) n=1 Tax=Cyclopho...	[more]
A0A1Z5K8X1_FISSO	2.890e-34	88.41	Threonine--tRNA ligase n=2 Tax=Fistulifera solaris...	[more]
B5Y5F7_PHATC	5.660e-34	86.96	Threonine--tRNA ligase n=1 Tax=Phaeodactylum trico...	[more]
A0A7S0D919_9EUKA	6.640e-34	90.91	Threonine--tRNA ligase n=2 Tax=Amorphochlora amoeb...	[more]
A0A7S3YRZ8_9EUKA	6.200e-33	89.23	Threonine--tRNA ligase (Fragment) n=1 Tax=Lotharel...	[more]
A0A7S2MRP2_9STRA	7.120e-33	88.06	Threonine--tRNA ligase n=2 Tax=Dictyocha speculum ...	[more]

Pages

InterPro

Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002314	Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)	PFAM	PF00587	tRNA-synt_2b	coord: 4..68 e-value: 4.1E-18 score: 66.0
None	No IPR available	GENE3D	3.30.930.10		coord: 1..71 e-value: 5.5E-26 score: 93.4
None	No IPR available	PANTHER	PTHR11451:SF44	THREONINE--TRNA LIGASE, CHLOROPLASTIC/MITOCHONDRIAL 2	coord: 3..68
None	No IPR available	SUPERFAMILY	55681	Class II aaRS and biotin synthetases	coord: 3..69
IPR002320	Threonine-tRNA ligase, class IIa	PANTHER	PTHR11451	TRNA SYNTHETASE-RELATED	coord: 3..68
IPR006195	Aminoacyl-tRNA synthetase, class II	PROSITE	PS50862	AA_TRNA_LIGASE_II	coord: 1..71 score: 11.192

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002314	Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)	PFAM	PF00587	tRNA-synt_2b	coord: 4..68 e-value: 4.1E-18 score: 66.0
None	No IPR available	GENE3D	3.30.930.10		coord: 1..71 e-value: 5.5E-26 score: 93.4
None	No IPR available	PANTHER	PTHR11451:SF44	THREONINE--TRNA LIGASE, CHLOROPLASTIC/MITOCHONDRIAL 2	coord: 3..68
None	No IPR available	SUPERFAMILY	55681	Class II aaRS and biotin synthetases	coord: 3..69
IPR002320	Threonine-tRNA ligase, class IIa	PANTHER	PTHR11451	TRNA SYNTHETASE-RELATED	coord: 3..68
IPR006195	Aminoacyl-tRNA synthetase, class II	PROSITE	PS50862	AA_TRNA_LIGASE_II	coord: 1..71 score: 11.192

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-distichus_contig104846	contig	F-distichus_contig104846:1269..1481 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Fucus distichus monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-distichus_contig104846.427.1	mRNA_F-distichus_contig104846.427.1	Fucus distichus monoicous	mRNA	F-distichus_contig104846 1269..1481 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-distichus_contig104846.427.1 ID=prot_F-distichus_contig104846.427.1|Name=mRNA_F-distichus_contig104846.427.1|organism=Fucus distichus monoicous|type=polypeptide|length=71bp
MGRELPIRWAELGTVYRYERSGTLHGLMRVRGFTQDDAHIFCLPEQVEDE
IISVLDLTEAILSRFGFDRRD

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002314	aa-tRNA-synt_IIb
IPR002320	Thr-tRNA-ligase_IIa
IPR006195	aa-tRNA-synth_II