mRNA_F-distichus_contig10452.402.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig10452.402.1 vs. uniprot
Match: A0A6H5KXJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXJ8_9PHAE) HSP 1 Score: 357 bits (916), Expect = 3.290e-102 Identity = 371/907 (40.90%), Postives = 431/907 (47.52%), Query Frame = 1
Query: 10 KTLAVDVSIWLTQFIKAMRDDEGKVVKNAHIIGTLRRVVKLLFHRIRPVFVFDGGAPALKGRTLAARRKLRSEGTNASFRKTAQRILASQLKKHKVALNAAKRHADSAPTATFTPVYQSSDADLKASSEATTRNEGGKRKRESNNDASAKSVSRENEILATSKAFPVGRGIHEGGNGXXXXXXXXXXX-VDWEDGGGIEAGGDEDG--ALRADREAPKNNDGGESKGPSITLAETRGYGGGAENGTGRQGVAAT-------NAEKSEEDAPWAVDTDDEEGEEDG-DWEEVDLPEDDRDIDPEVIASLPDHMKKQVIEAAKRRQRMRSRAQYMPVAGDPALYSQTQLSNFLRGQKLNSQILRAHKQDDGEREGKKIASEAGRRYIMIPAAGSKGSGRTPTTG--LASRKQGYASPSKGQRRRIAGDDSDDFEEWSYDRSRSTASRKAHGSGGAGNAAPSVVXXXXXXXXXXXXXXXXXXXXXXXXXXAGGFLPQKPERGDNDSVLATSGQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVRAHGGDDGEESCIDGE--ENEGVEESKRSGCAPSSTKTTAVGKGSPFRFE---------------------------------------PGAADEVIARGLQEEEDRRAAMALRDE-DEIPSAGGVANERPAVLTVAFAPGADGSRGNNSGL-----TSNTSDIASTGGWRNQ----------GLSALHPPEHSELGHHEATRSP------GEVTSVVHV-----RPEPXXXXXXXXIDPSSLAGGSSRSEFWDLVGSDSAEAGARTGRQAKRNGCSDGGGRGGFFDDF------------EGHGAAPPQGQPSRTVPT-DVALKRSVGMASRMAGWAGRVVERVLKEH----------HRQASIKG 2418
KTLAVDVSIWLTQFIKAMRDD+GKVVKNAHIIGTLRRVVKLLFHRIRPVFVFDGGAPALK RTLAARRKLR EGT+ S RKTAQRILASQLKKHK A++AAKR + A F PVYQ D A+ G S +A++ XXXXXXXXXXX VDW D + GG EDG L A R+A ++DG E Y G G GR G AA A E A WAVDTD+EE E G WEEV+LPE + DIDPEVIASLPDH+KKQVIEAAKRRQRMRSRAQYMPVAG+PA+YSQTQLSNFLR +LN+QIL+A KQDD +R GK+IASEAGRRYIM PA S G G + G +S +RRRI D +DF+ WSY S A +GG P+ XXXXXXXXX GGFLP+ D G E +DG G + P + GKG R + GAAD IAR LQEEEDRRAAM L+DE D S GV FA DGS G+++G + +D+ G R + S++ + ++A ++P G +SV ID +L G R + +L S A G G SD FD F ++ Q + T T + AL+RSV MASRMAGWAGRVVERVLKEH HR AS G
Sbjct: 25 KTLAVDVSIWLTQFIKAMRDDDGKVVKNAHIIGTLRRVVKLLFHRIRPVFVFDGGAPALKARTLAARRKLRLEGTDCSVRKTAQRILASQLKKHKAAISAAKRASSQAAVPAFNPVYQGGDISSTATXXXXXXGTTGTG---SGGTTTARTTRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVDWADQEVEQGGGGEDGLGVLGAGRQAVVDSDGDEV------------YEGADRPGGGRGGGAAXVXXXXXXXAAGDVEAAAWAVDTDEEEEEGRGVAWEEVELPERNEDIDPEVIASLPDHVKKQVIEAAKRRQRMRSRAQYMPVAGNPAMYSQTQLSNFLRSNQLNAQILKAQKQDDSDRTGKRIASEAGRRYIMTPAGASGRIGAVSGAGGXXXXTRNGASSVGSSRRRRIT-DGGEDFKAWSY-----AGSAGAEENGGVVKTRPTAAPTNADTDXXXXXXXXX-----------GGFLPESE---DAPVARTRDGGTGAPPDEEPSGEFPSGGYVSEEGGRLLPPSEEEDSSGPEVPAVDGGTGRTRGRVQLPVHRPKPIGHDLASGGKGKRRRLQRLADXXXXXXXXXXXXXXXXXXXXXXXRPAARRARPRPDSGAAD-AIARVLQEEEDRRAAMTLQDEIDPSLSTAGV-----------FADNDDGSGGSSTGKGNLLPETGVNDLDPLGLLRTRKARSESPTATARSSISDGSEAAAAENKAAQTPRPSKSLGARSSVGDPYEGGGSSSGGDAEIEVEIDLKNLVAGGGRRDLMELFPSSGAATGDVGGGSGAVEEDSDX-----XFDGFVXXXXXXXXXXXXXRASSQVSAQGATTSYTNEAALQRSVDMASRMAGWAGRVVERVLKEHRKARKRPSFSHRAASASG 879
BLAST of mRNA_F-distichus_contig10452.402.1 vs. uniprot
Match: D7FZY4_ECTSI (DNA repair enzyme n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZY4_ECTSI) HSP 1 Score: 312 bits (799), Expect = 1.140e-86 Identity = 243/504 (48.21%), Postives = 272/504 (53.97%), Query Frame = 1
Query: 10 KTLAVDVSIWLTQFIKAMRDDEGKVVKNAHIIGTLRRVVKLLFHRIRPVFVFDGGAPALKGRTLAARRKLRSEGTNASFRKTAQRILASQLKKHKVALNAAKRHADSAPTATFTPVYQSSDADLKASSEATTRNEGGKRKRESNNDASAKSVSRENEILATSKAFPVGRGIHEGGNGXXXXXXXXXXXVDWEDGGGI-------EAGGDED----------------------------GALRADREAPKNNDGGESKGPSITLAETRGYGGGAENGTGRQ-----------------------GVAATNAEKSEEDAPWAVDTDDEEGEEDGDWEEVDLPEDDRDIDPEVIASLPDHMKKQVIEAAKRRQRMRSRAQYMPVAGDPALYSQTQLSNFLRGQKLNSQILRAHKQDDGEREGKKIASEAGRRYIMIPAAGSKGSGRTPTTGLASR--KQGYASPSKGQRRRIAGDDSDDFEEWSYDRSRSTASRKAHGSGGAGNAA 1341
KTLAVDVSIWLTQFIKAMRDD+GKVVKNAHIIGTLRRVVKLLFHRIRPVFVFDGGAPALK RTLAARRKLRSEGT++S RKTAQRILASQLKKHK A++AAKR + A F PVYQ D ++++ XXXXXXXXXXX E+GG + EA G G L A R A ++DG E + E RG GVA WEEV+LPE + DIDPEVIASLPDH+KKQVIEAAKRRQRMRSRAQYMPVAG+PA+YSQTQLSNFLR KLN+QIL+A KQDD +R GK+IASEAGRRYIM PA S SG G + G +S +RRRI DD DDF+ WSY S A G+GG G A
Sbjct: 25 KTLAVDVSIWLTQFIKAMRDDDGKVVKNAHIIGTLRRVVKLLFHRIRPVFVFDGGAPALKARTLAARRKLRSEGTDSSVRKTAQRILASQLKKHKAAISAAKRASSQAAVPAFNPVYQGGD-------------------------------------MSSAPXXXXXXXXXXXXXXXXXXXXXXXXXKQGEEGGVVQPLVSPEEAAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLGVLGAGRHAVVDSDGDEVYEGTNRPGEERGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGVA---------------------------WEEVELPERNEDIDPEVIASLPDHVKKQVIEAAKRRQRMRSRAQYMPVAGNPAMYSQTQLSNFLRSNKLNAQILKAQKQDDSDRTGKRIASEAGRRYIMTPAGASGRSGAVSGAGXXXXXXRNGASSVGSSRRRRIT-DDGDDFKAWSY-----AGSAGAEGNGGGGVTA 458
BLAST of mRNA_F-distichus_contig10452.402.1 vs. uniprot
Match: A0A7R9YE64_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YE64_9STRA) HSP 1 Score: 155 bits (392), Expect = 1.210e-37 Identity = 147/355 (41.41%), Postives = 191/355 (53.80%), Query Frame = 1
Query: 10 KTLAVDVSIWLTQFIKAMRDDEGKVVKNAHIIGTLRRVVKLLFHRIRPVFVFDGGAPALKGRTLAARRKLRSEGTNASFRKTAQRILASQLKKHKVALNAAKRHADSAPTATFTPVYQSSDADLKASSEATTRNEGGKR--KRESNNDASAKSVSRENEILATSKAFPVGRGIHEGGNGXXXXXXXXXXXVDWEDGGGIEAGG----DEDGALRADREAPKNNDGGESKGPSITLAETRGYGGGAENGTGRQGVAATNAEKSEEDAPWAVDTDDEEGEEDGDWEEVDLPEDDRDIDPEVIASLPDHMKKQVIEAAKRRQRMRSRAQYMPVAGDPALYSQTQLSNFLRGQKLNSQI 1056
KTLA+D+SIWLTQF+KAMRDD+G+++KNAH++GTLRR+ KLLFHRIRPV VFDG AP LK RTL RR +R E AS KTAQR+L +QL+K + A K D F P S+ A + + A + EG KR +R D S S ++ N P G+ GG XXXXXXXXXXX DED +D A + L TR Y D+D EG EDG + LP+ D+DP+++A+LP ++K++IEAA R +R++SR +Y+ VA P LYSQTQ+SNFL+ KLN I
Sbjct: 25 KTLAIDMSIWLTQFVKAMRDDDGRLLKNAHLLGTLRRLCKLLFHRIRPVMVFDGSAPTLKRRTLEKRRAMR-ERQEASVTKTAQRLLLAQLRKAREEAKAPKAPGDRGFQPGFRPPEASTAAKRREETGAEEK-EGPKRADQRFGEEDKSGSSSAKRN--------GPKGKSDQSGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEDVEWESDDAAEE----------KSVLVSTRRY--------------------------HDSDSDGSEGSEDG---VLVLPKT-GDMDPDMLANLPPLLRKEIIEAAHRERRVKSRQEYISVAERPLLYSQTQISNFLKHCKLNDNI 329
BLAST of mRNA_F-distichus_contig10452.402.1 vs. uniprot
Match: W7TX36_9STRA (Dna repair enzyme n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TX36_9STRA) HSP 1 Score: 161 bits (408), Expect = 2.230e-37 Identity = 139/366 (37.98%), Postives = 180/366 (49.18%), Query Frame = 1
Query: 1 MQEKTLAVDVSIWLTQFIKAMRDDEGKVVKNAHIIGTLRRVVKLLFHRIRPVFVFDGGAPALKGRTLAARRKLRSEGTNASFRKTAQRILASQLKKHKVALNAAKRHADSAPTATFTPVYQSSDADLKASSEATTRNEGGKRKRESNNDASAKSVSRENEILATSKAFPVGRGIHEGGNGXXXXXXXXXXXVDWEDGGGIEAGGDEDGALRADREAPKNNDGGESKGPSITLAETRGYGGGAENGTGRQGVAATNAEKSEEDAPWAVDTDDEEGEEDGDWEEVDLPEDDRDIDPEVIASLPDHMKKQVIEAAKRRQRMRSRAQYMPVAGDPALYSQTQLSNFLRGQKLNSQI--LRAHKQDDGERE 1092
++ KTLA+DVSIWLTQFIKAMRDDEGKVVKNAHIIGT RR+VKLLF+RIRP+FVFDGG P +K RT+ +R++ R E S RKTAQR+L +QLKK + L S+ T AS K+ ++ ++ PVG E G G E D A A RE DG + + G G + R AA G + D+ +D ++D V+ASLP ++K V+E+AKRRQRM SR +MPVAG+PALYSQ Q+SNFL+ +LN ++ LR DDG R+
Sbjct: 22 LERKTLAIDVSIWLTQFIKAMRDDEGKVVKNAHIIGTFRRIVKLLFYRIRPIFVFDGGTPEIKRRTVMSRKR-RREDQETSVRKTAQRLLLAQLKKQHI---------------------------LSGSTVLT--------------GASGKNKKQKADLE------PVGSLGAEAGFAAGFIP------------GAPEKAWDPPDAEVAGREEFVAGDGSQDARKGAEKVDGHGINGDGGSIRQRSAAAAFAQALPAXXXXXXXXXXXXXXXXSGTDDVGDILLEDDNVDVMVLASLPPELQKDVVESAKRRQRMLSRQAFMPVAGNPALYSQAQISNFLKSSRLNQKVSSLREVLGDDGNRD 327
BLAST of mRNA_F-distichus_contig10452.402.1 vs. uniprot
Match: A0A836CI30_9STRA (XPG N-terminal domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI30_9STRA) HSP 1 Score: 129 bits (324), Expect = 2.500e-31 Identity = 65/96 (67.71%), Postives = 80/96 (83.33%), Query Frame = 1
Query: 1 MQEKTLAVDVSIWLTQFIKAMRDDEGKVVKNAHIIGTLRRVVKLLFHRIRPVFVFDGGAPALKGRTLAARRKLRSEGTNASFRKTAQRILASQLKK 288
++ KTLAVDVSIWL +FIK MR D+G V+KNAHIIGTLRRV+KLL+HRIRPVFVFDGGAP+LK +TL ARR++R + + K AQRIL +QLK+
Sbjct: 22 LERKTLAVDVSIWLVKFIKTMRQDDGAVMKNAHIIGTLRRVIKLLYHRIRPVFVFDGGAPSLKEQTLRARRRMRQDA-EVNVTKQAQRILTAQLKR 116
BLAST of mRNA_F-distichus_contig10452.402.1 vs. uniprot
Match: A0A7S2SQL6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQL6_9STRA) HSP 1 Score: 124 bits (312), Expect = 8.580e-29 Identity = 63/92 (68.48%), Postives = 74/92 (80.43%), Query Frame = 1
Query: 10 KTLAVDVSIWLTQFIKAMRDDEGKVVKNAHIIGTLRRVVKLLFHRIRPVFVFDGGAPALKGRTLAARRKLRSEGTNASFRKTAQRILASQLK 285
KTLAVDVSIWL QFIKAMRD++GK++KNAH+IGT RR+ KLLFHRIRPVFVFDGG P LK RT+ RR+ R S RK A++IL +QLK
Sbjct: 1 KTLAVDVSIWLVQFIKAMRDEDGKMIKNAHLIGTFRRIAKLLFHRIRPVFVFDGGVPILKKRTIE-RRRARRNTQELSVRKQAEKILLNQLK 91
BLAST of mRNA_F-distichus_contig10452.402.1 vs. uniprot
Match: A0A059LFD6_9CHLO (XPG N-terminal domain-containing protein (Fragment) n=1 Tax=Helicosporidium sp. ATCC 50920 TaxID=1291522 RepID=A0A059LFD6_9CHLO) HSP 1 Score: 117 bits (292), Expect = 9.320e-26 Identity = 55/92 (59.78%), Postives = 75/92 (81.52%), Query Frame = 1
Query: 10 KTLAVDVSIWLTQFIKAMRDDEGKVVKNAHIIGTLRRVVKLLFHRIRPVFVFDGGAPALKGRTLAARRKLRSEGTNASFRKTAQRILASQLK 285
K LA+D S+W+ QFIKAMRD+ G++++NAH+IG RR+ KLLFHR+RP+FVFDG +PALK +T+AARR+ R E + FRK A+R+L SQL+
Sbjct: 25 KRLAIDASVWVYQFIKAMRDERGEMLRNAHLIGFFRRICKLLFHRVRPIFVFDGASPALKRQTIAARRRQR-EAQESRFRKAAERLLLSQLR 115
BLAST of mRNA_F-distichus_contig10452.402.1 vs. uniprot
Match: K3WLQ4_GLOUD (XPGN domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WLQ4_GLOUD) HSP 1 Score: 120 bits (300), Expect = 2.420e-25 Identity = 61/92 (66.30%), Postives = 73/92 (79.35%), Query Frame = 1
Query: 10 KTLAVDVSIWLTQFIKAMRDDEGKVVKNAHIIGTLRRVVKLLFHRIRPVFVFDGGAPALKGRTLAARRKLRSEGTNASFRKTAQRILASQLK 285
K LAVD SIWLTQF+KAMRDDEG ++KNAH+IGT RV KLLF+RI+PVFVFDG P +K RT A RRK R E A+ ++TAQRIL ++LK
Sbjct: 25 KVLAVDASIWLTQFVKAMRDDEGNMIKNAHVIGTFHRVAKLLFYRIKPVFVFDGQTPEIKKRTTARRRK-RQEHQAANLKQTAQRILINRLK 115
BLAST of mRNA_F-distichus_contig10452.402.1 vs. uniprot
Match: UPI0010366706 (DNA repair protein UVH3-like isoform X2 n=1 Tax=Camellia sinensis TaxID=4442 RepID=UPI0010366706) HSP 1 Score: 113 bits (282), Expect = 3.170e-25 Identity = 56/92 (60.87%), Postives = 72/92 (78.26%), Query Frame = 1
Query: 10 KTLAVDVSIWLTQFIKAMRDDEGKVVKNAHIIGTLRRVVKLLFHRIRPVFVFDGGAPALKGRTLAARRKLRSEGTNASFRKTAQRILASQLK 285
K LA+D SIW+ QF+KAMRDD+G++VKNAHI+G RR+ KLLF R +PVFVFDGG PALK RT+ ARR+ R E A RKTA+++L + L+
Sbjct: 25 KKLAIDASIWMIQFMKAMRDDKGEMVKNAHILGFFRRICKLLFLRTKPVFVFDGGTPALKRRTVIARRRQR-ENAQAKIRKTAEKLLLNHLR 115
BLAST of mRNA_F-distichus_contig10452.402.1 vs. uniprot
Match: A0A453IPY8_AEGTS (XPGN domain-containing protein n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A453IPY8_AEGTS) HSP 1 Score: 111 bits (278), Expect = 8.010e-25 Identity = 61/106 (57.55%), Postives = 79/106 (74.53%), Query Frame = 1
Query: 16 LAVDVSIWLTQFIKAMRDDEGKVVKNAHIIGTLRRVVKLLFHRIRPVFVFDGGAPALKGRTLAARRKLRSEGTNASFRKTAQRILASQLKKHKVALNAAKRHADSA 333
LAVD SIW+ QF++AMRDD+G +V++AHI+G LRR+ KLLF R RPVFVFDG PALK RTLAARR+ R + A RKTA+++L S LK ++ AA+ +D A
Sbjct: 1 LAVDASIWMVQFMRAMRDDKGDMVRDAHILGFLRRICKLLFLRARPVFVFDGATPALKRRTLAARRRNR-DAAQAKVRKTAEKLLISHLKASRLEELAAQIKSDRA 105 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10452.402.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig10452.402.1 >prot_F-distichus_contig10452.402.1 ID=prot_F-distichus_contig10452.402.1|Name=mRNA_F-distichus_contig10452.402.1|organism=Fucus distichus monoicous|type=polypeptide|length=811bp MQEKTLAVDVSIWLTQFIKAMRDDEGKVVKNAHIIGTLRRVVKLLFHRIRback to top mRNA from alignment at F-distichus_contig10452:1434..6806- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig10452.402.1 ID=mRNA_F-distichus_contig10452.402.1|Name=mRNA_F-distichus_contig10452.402.1|organism=Fucus distichus monoicous|type=mRNA|length=5373bp|location=Sequence derived from alignment at F-distichus_contig10452:1434..6806- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig10452:1434..6806- >mRNA_F-distichus_contig10452.402.1 ID=mRNA_F-distichus_contig10452.402.1|Name=mRNA_F-distichus_contig10452.402.1|organism=Fucus distichus monoicous|type=CDS|length=4866bp|location=Sequence derived from alignment at F-distichus_contig10452:1434..6806- (Fucus distichus monoicous)back to top |