prot_F-distichus_contig10450.401.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig10450.401.1
Unique Nameprot_F-distichus_contig10450.401.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length60
Homology
BLAST of mRNA_F-distichus_contig10450.401.1 vs. uniprot
Match: A0A6H5J9E2_9PHAE (DDE-1 domain-containing protein (Fragment) n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9E2_9PHAE)

HSP 1 Score: 63.9 bits (154), Expect = 2.000e-10
Identity = 30/54 (55.56%), Postives = 38/54 (70.37%), Query Frame = 0
Query:    5 HNELVDARGQVKVMTCPPNCTSKHQPRDVGIIATTKRLYRSQLLATIVANASVA 58
            H +L+D  GQV+V+  PPNCTS HQP D+GIIA TK +YR +LL   V+   VA
Sbjct:  211 HGDLIDPVGQVEVVMYPPNCTSVHQPMDMGIIAATKVIYRRELLDAKVSTMLVA 264          
BLAST of mRNA_F-distichus_contig10450.401.1 vs. uniprot
Match: A0A6H5KWS4_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWS4_9PHAE)

HSP 1 Score: 61.2 bits (147), Expect = 1.760e-9
Identity = 30/54 (55.56%), Postives = 35/54 (64.81%), Query Frame = 0
Query:    5 HNELVDARGQVKVMTCPPNCTSKHQPRDVGIIATTKRLYRSQLLATIVANASVA 58
            H +LVD RGQV +   PPNCTS HQP D+GIIA TK  YR +LL    +   VA
Sbjct:  208 HGDLVDDRGQVTIKFYPPNCTSVHQPMDLGIIAETKCNYRKELLDVKTSTMLVA 261          
BLAST of mRNA_F-distichus_contig10450.401.1 vs. uniprot
Match: A0A6H5JB59_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB59_9PHAE)

HSP 1 Score: 60.8 bits (146), Expect = 2.380e-9
Identity = 29/54 (53.70%), Postives = 36/54 (66.67%), Query Frame = 0
Query:    5 HNELVDARGQVKVMTCPPNCTSKHQPRDVGIIATTKRLYRSQLLATIVANASVA 58
            H +LVD + QVK++  PPNCTSKHQP D GIIA  K  YR++LL   V   + A
Sbjct:  107 HADLVDPKEQVKILDLPPNCTSKHQPMDAGIIAAWKVRYRTKLLGIRVDTMTSA 160          
BLAST of mRNA_F-distichus_contig10450.401.1 vs. uniprot
Match: A0A6H5L4D9_9PHAE (DDE-1 domain-containing protein n=8 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4D9_9PHAE)

HSP 1 Score: 60.5 bits (145), Expect = 3.350e-9
Identity = 30/54 (55.56%), Postives = 35/54 (64.81%), Query Frame = 0
Query:    5 HNELVDARGQVKVMTCPPNCTSKHQPRDVGIIATTKRLYRSQLLATIVANASVA 58
            H +LVD RGQV +   PPNCTS HQP D+GIIA TK  YR +LL    +   VA
Sbjct:  281 HGDLVDDRGQVTIKFYPPNCTSVHQPVDLGIIAETKCNYRKELLDVKTSTMLVA 334          
BLAST of mRNA_F-distichus_contig10450.401.1 vs. uniprot
Match: A0A6H5K258_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K258_9PHAE)

HSP 1 Score: 59.7 bits (143), Expect = 5.690e-9
Identity = 27/44 (61.36%), Postives = 32/44 (72.73%), Query Frame = 0
Query:    5 HNELVDARGQVKVMTCPPNCTSKHQPRDVGIIATTKRLYRSQLL 48
            H +LVD + QVK+   PPNCTSKHQP D GIIA  K  YR++LL
Sbjct:  228 HADLVDTKEQVKIRELPPNCTSKHQPMDAGIIAAWKVRYRAKLL 271          
BLAST of mRNA_F-distichus_contig10450.401.1 vs. uniprot
Match: A0A6H5JM90_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM90_9PHAE)

HSP 1 Score: 58.5 bits (140), Expect = 1.150e-8
Identity = 26/44 (59.09%), Postives = 33/44 (75.00%), Query Frame = 0
Query:    5 HNELVDARGQVKVMTCPPNCTSKHQPRDVGIIATTKRLYRSQLL 48
            H +LVD + QVK++  PPNCTSKHQP D GIIA  K  +R++LL
Sbjct:  206 HADLVDPKEQVKILELPPNCTSKHQPMDAGIIAAWKVRHRTKLL 249          
BLAST of mRNA_F-distichus_contig10450.401.1 vs. uniprot
Match: A0A6H5KT98_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT98_9PHAE)

HSP 1 Score: 48.9 bits (115), Expect = 4.000e-5
Identity = 21/34 (61.76%), Postives = 26/34 (76.47%), Query Frame = 0
Query:   14 QVKVMTCPPNCTSKHQPRDVGIIATTKRLYRSQL 47
            +VK++  PPNCTSKHQP D GIIA  K  YR++L
Sbjct:  207 KVKILELPPNCTSKHQPMDAGIIAAWKVRYRTKL 240          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10450.401.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5J9E2_9PHAE2.000e-1055.56DDE-1 domain-containing protein (Fragment) n=2 Tax... [more]
A0A6H5KWS4_9PHAE1.760e-955.56DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JB59_9PHAE2.380e-953.70DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5L4D9_9PHAE3.350e-955.56DDE-1 domain-containing protein n=8 Tax=Ectocarpus... [more]
A0A6H5K258_9PHAE5.690e-961.36DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JM90_9PHAE1.150e-859.09HTH CENPB-type domain-containing protein n=1 Tax=E... [more]
A0A6H5KT98_9PHAE4.000e-561.76DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004875DDE superfamily endonuclease domainPFAMPF03184DDE_1coord: 11..54
e-value: 2.0E-6
score: 27.6

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004875DDE superfamily endonuclease domainPFAMPF03184DDE_1coord: 11..54
e-value: 2.0E-6
score: 27.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig10450contigF-distichus_contig10450:5860..6039 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig10450.401.1mRNA_F-distichus_contig10450.401.1Fucus distichus monoicousmRNAF-distichus_contig10450 5304..6125 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig10450.401.1 ID=prot_F-distichus_contig10450.401.1|Name=mRNA_F-distichus_contig10450.401.1|organism=Fucus distichus monoicous|type=polypeptide|length=60bp
MQLVHNELVDARGQVKVMTCPPNCTSKHQPRDVGIIATTKRLYRSQLLAT
IVANASVAK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004875DDE_SF_endonuclease_dom