mRNA_F-distichus_contig10376.335.1 (mRNA) Fucus distichus monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-distichus_contig10376.335.1
Unique NamemRNA_F-distichus_contig10376.335.1
TypemRNA
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Homology
BLAST of mRNA_F-distichus_contig10376.335.1 vs. uniprot
Match: A0A8K1CTN1_PYTOL (Uncharacterized protein n=2 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CTN1_PYTOL)

HSP 1 Score: 216 bits (550), Expect = 1.640e-62
Identity = 125/338 (36.98%), Postives = 186/338 (55.03%), Query Frame = 1
Query:    1 KCRFGAKGFHQIKGIHCQESSSPTPTQSSIRIALAVMALLDWKGRQLDVEMGFLEADVTEQLYVELPDGYRDSPSQVERLQKATDGLMHTGLLWSKKFSGELIASGFERSQTDPCVFCRKHLGKVGDIIVLYVDDLLVLSESKQDEHQVLEDLRSSFSIKDLGEISYYLGCHITRDRKARTVMFDQQRYAQTVNERFEIRKTSVIPVPTGKS-PLSKADGPQNDAGITEVHGIPYRETVGALLWVANMTRPDLAYTAHTLTKFGDNPGPEHWKTVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSGGAVMLGGGAISWFSRAQ 1011
            K R  A GF Q+ G+   E+ +   +  SIRI L+V     +   QLDV+  FL AD+ E +Y+E P+G +    +V +L KA  GL   G  W K   G LI  GF+   +D C++  +  G     I LYVDD++V   ++    +V + + + F IK+LG + + LG  I  DR  R +  +Q  Y +T+ ERF  +    +  P  +S  LSKADGP++D    E+   PYR  +G L +VA  TRPD+A+    L++F +NPGP HW   ++ L+YLK T   G++YGG  E+     + DAD  +  D RRSVSG  +M+ GG I + ++ Q
Sbjct:   58 KARLVALGFLQLFGVDFFETYAAVASMGSIRIFLSVCCAAGYILEQLDVDTAFLNADLKEDVYIEPPEGLKVDGDRVLKLNKALYGLKQAGNAWFKTIHGALIDLGFKPCGSDTCIYVGRAGGDT-TYICLYVDDMVVGGRTQTRVDEVKKLIAARFRIKELGPVKHLLGMEIVYDRVKRYLSINQAHYVKTLVERFNQQSCRDVTNPCEQSLKLSKADGPRDDQQKAEMSKRPYRSLIGCLQYVAQCTRPDIAFAVTHLSRFMENPGPRHWTAAIRVLRYLKSTRDYGISYGGDHEENTPVVFCDADWGTSVDDRRSVSGLVIMMNGGPIVFKAKYQ 394          
BLAST of mRNA_F-distichus_contig10376.335.1 vs. uniprot
Match: A0A0C3AKI0_9AGAM (Uncharacterized protein (Fragment) n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C3AKI0_9AGAM)

HSP 1 Score: 224 bits (570), Expect = 5.330e-62
Identity = 119/342 (34.80%), Postives = 195/342 (57.02%), Query Frame = 1
Query:    1 KCRFGAKGFHQIKGIHCQESSSPTPTQSSIRIALAVMALLDWKGRQLDVEMGFLEADVTEQLYVELPDGYRDSPSQVERLQKATDGLMHTGLLWSKKFSGELIASGFERSQTDPCVFCRKHLGKVGDIIVLYVDDLLVLSESKQDEHQVLEDLRSSFSIKDLGEISYYLGCHITRDRKARTVMFDQQRYAQTVNERFEIRKTSVIPVPTGKS-PLSKADGPQNDAGITEVHGIP-YRETVGALLWVANMTRPDLAYTAHTLTKFGDNPGPEHWKTVMKALQYLK--RTASLGVTYGGATE-DMKLSAWVDADHASCPDTRRSVSGGAVMLGGGAISWFSRAQ 1011
            K R  A+GF QI G+   ++ SP     ++R  +A+ A+ DW+ RQ+D++  +L  ++ E++++E P+G+ D   +V RL+    GL   G +W+KK + +L   GF R+  DPCV+     GK+  I+ ++VDD+++  +S+      +  L+  F +KDLGE    LG  I R+RK +T+   Q+ Y  T+ ERF   K + IP+P   +  L K D   ++    E H +  Y+  +G++++ +  T P LAY   TL++F  NPG EH   + +  +YL   R   +G+ YGG  +  + +  + DAD AS P+ R+S+SG   +LGGGAISW S+ Q
Sbjct:  919 KARLVAQGFSQIPGVDYTDNYSPVVRLDAVRACIALSAIKDWEMRQIDIKGAYLNGELEEEIFMEQPEGFNDGSGRVCRLKLPLYGLKQAGRMWNKKLNAQLTTLGFNRTNADPCVYYNNQDGKI-TILTVWVDDIILCGDSESRIDTTVSALKKIFEVKDLGEPKLLLGIQIIRNRKLKTITISQRNYINTILERFNYSKINPIPIPLDPNVTLRKRD---DEITPPEKHLVKEYQTKLGSIMYASIGTMPQLAYAVQTLSQFSSNPGAEHMSALKRVFKYLAHARDHEVGIVYGGTRQWPVDIIGYTDADWASNPNDRKSISGYVFLLGGGAISWSSKKQ 1256          
BLAST of mRNA_F-distichus_contig10376.335.1 vs. uniprot
Match: H3G9E3_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=4 Tax=Phytophthora ramorum TaxID=164328 RepID=H3G9E3_PHYRM)

HSP 1 Score: 211 bits (537), Expect = 9.890e-61
Identity = 121/340 (35.59%), Postives = 187/340 (55.00%), Query Frame = 1
Query:    1 KCRFGAKGFHQIKGIHCQESSSPTPTQSSIRIALAVMALLDWKGRQLDVEMGFLEADVTEQLYVELPDGYRD--SPSQVERLQKATDGLMHTGLLWSKKFSGELIASGFERSQTDPCVFCRKHLGKVGDIIVLYVDDLLVLSESKQDEHQVLEDLRSSFSIKDLGEISYYLGCHITRDRKARTVMFDQQRYAQTVNERFEIRKTSVIPVPTG-KSPLSKADGPQNDAGITEVHGIPYRETVGALLWVANMTRPDLAYTAHTLTKFGDNPGPEHWKTVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSGGAVMLGGGAISWFSRAQ 1011
            K R  AKG+ Q  GI   ++ +P   + SI  +LA  A  D +   +DV+  FL  DV E+LY++ PDG+ D  +P+    L++A  G       W+ K +  L   GF RS  DPCV+ R+   +   I+V+YVDDL++ S++K+    +   L+  FSIK+LGE+ Y LG  I R+R+ +T++ +Q+ Y + + E+F + K   +  P    S L K    + +A + +    PYRE VGAL+++A  TRPD+A     + KF +     HW    + L+YLK T  +G+ + GA +   +  + DA+ A   DTRRS +G    L G AISW S+ Q
Sbjct:   46 KARLVAKGYTQRPGIDFTDTFAPVAREESINASLATAAEEDMEAENVDVDTAFLYGDVEEELYMDQPDGFEDQSNPAMKCLLKQALYGTKQAARQWNSKLNKHLEDQGFRRSDADPCVYVRRSTDEYS-IVVIYVDDLMLFSKTKEHIESIKVALKKEFSIKELGELKYCLGIEIDRNREDKTILMNQRAYIKRLAEKFGVDKCKAVHTPADCNSKLVKMT--EEEAFVAKY---PYRELVGALMYLATCTRPDIAQAVGEVAKFCERYNKSHWVAAKRILKYLKTTQDMGIVFNGAIKGEPIG-YADANWAGDLDTRRSTTGYVFFLNGSAISWKSKRQ 378          
BLAST of mRNA_F-distichus_contig10376.335.1 vs. uniprot
Match: A0A4Y2Q6W6_ARAVE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2Q6W6_ARAVE)

HSP 1 Score: 208 bits (530), Expect = 2.840e-59
Identity = 118/344 (34.30%), Postives = 191/344 (55.52%), Query Frame = 1
Query:    1 KCRFGAKGFHQIKGIHCQESSSPTPTQSSIRIALAVMALLDWKGRQLDVEMGFLEADVTEQLYVELPDGYRDSPSQ-----VERLQKATDGLMHTGLLWSKKFSGELIASGFERSQTDPCVFCRKHLGKVGDIIVLYVDDLLVLSESKQDEHQVLEDLRSSFSIKDLGEISYYLGCHITRDRKARTVMFDQQRYAQTVNERFEIRKTSVI--PVPTGKSPLSKADGPQNDAGITEVHGIPYRETVGALLWVANMTRPDLAYTAHTLTKFGDNPGPEHWKTVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSGGAVMLGGGAISWFSRAQ 1011
            K R  AKGF QI+G+   E+ SP    +++R+ LA  A+ DW+  QLD  + F++  + E++Y+++P+G  +   +     V +L KA DGL  +G +W +     L+   F +S  D C + +    K   I+ +YVDDLL+ S S + ++ V E L S+F +KDLG  SY LG  I RDRK   V  +Q +Y + V  R+ + ++  +  P+ T KS ++K+      A + ++  +PY+  VG+LL+ A  TRPD+ YT + L +F  NP   HW  V + ++YL+ TA   + Y     D  +  + D+++       RS +G   M+GGGA+SW S+ Q
Sbjct:   88 KTRLVAKGFSQIEGVDYNETFSPVVRYATLRVLLAFAAIYDWEIDQLDAVIAFVQGTLDEEIYMKIPEGLNEYDQENLEGKVLKLNKALDGLKQSGRVWYQMLENGLVEMDFRQSSFDSCAYIKVDQNKDIVIVTIYVDDLLIFSNSVKLKNWVKEQLTSTFKMKDLGTASYCLGIKIERDRKNGYVSVNQTQYVEGVLRRYNMHESHPVTTPLDTNKS-ITKSI-----ANMEDLTHVPYQMAVGSLLYAAQATRPDIGYTVNLLCQFCSNPSRTHWTAVKRIMRYLRGTAETLLNYSRNNGDAVIG-YCDSNYGGDIADHRSTTGYVFMIGGGAVSWCSKRQ 424          
BLAST of mRNA_F-distichus_contig10376.335.1 vs. uniprot
Match: A0A146H2N5_MYCCL (Integrase catalytic domain-containing protein n=1 Tax=Mycena chlorophos TaxID=658473 RepID=A0A146H2N5_MYCCL)

HSP 1 Score: 214 bits (546), Expect = 8.690e-59
Identity = 122/340 (35.88%), Postives = 186/340 (54.71%), Query Frame = 1
Query:    1 KCRFGAKGFHQIKGIHCQESSSPTPTQSSIRIALAVMALLDWKGRQLDVEMGFLEADVTEQLYVELPDGY--RDSPSQVERLQKATDGLMHTGLLWSKKFSGELIASGFERSQTDPCVFCRKHLGKVGDIIVLYVDDLLVLSESKQDEHQVLEDLRSSFSIKDLGEISYYLGCHITRDRKARTVMFDQQRYAQTVNERFEIRKTSVIPVPTGKSPLSKADGPQNDAGITEVHGIPYRETVGALLWVANMTRPDLAYTAHTLTKFGDNPGPEHWKTVMKALQYLKRTASLGVTYGGATEDMKL-SAWVDADHASCPDTRRSVSGGAVMLGGGAISWFSRAQ 1011
            K R  A G HQ  G+   ++ +PTP  S++R  LA+ AL D +   +D+   FL  ++  ++Y+  P+G+  RDS S V +L K+  GL     +W KK    L   GF+R   +  V+  K  G+   I+ ++VDD+ + S+++    ++  DL+S+F ++DLG  S+ LG  + RDR  RT+   Q++Y   + ERF +   + +  P     L+   GP ++     +   PY    GAL ++AN+TRPD+AY    L +F  NPGP HWK V   ++YLK T  L +TY     + +L + + DADH   PD  RS SG  V +G GAISW SR Q
Sbjct:  972 KGRVVAMGNHQRPGLDFDDTFAPTPKWSALRAILAIAALEDLELESVDISSAFLNGEINSKVYMRQPEGFVERDS-SWVWKLIKSIYGLKQASRIWHKKLDETLRGLGFQRVSCEHSVWVWKR-GEDRVIVPVFVDDITIASKNQPAVAKLKNDLKSAFKLRDLGPTSFLLGVEVIRDRPNRTLSLSQRQYTLDILERFGLADCNPVTTPLDADKLAALAGPLSEEDANYMRDKPYVNATGALSYLANVTRPDIAYAVGVLCRFNANPGPRHWKAVKHLMKYLKGTVDLKLTYAPNPHNTELFTTYSDADHGGNPDNGRSTSGMVVKIGTGAISWHSRLQ 1309          
BLAST of mRNA_F-distichus_contig10376.335.1 vs. uniprot
Match: A0A4Y9ZKD1_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZKD1_9AGAM)

HSP 1 Score: 207 bits (526), Expect = 2.440e-58
Identity = 123/343 (35.86%), Postives = 187/343 (54.52%), Query Frame = 1
Query:    1 KCRFGAKGFHQIKGIHCQESSSPTPTQSSIRIALAVMALLDWKGRQLDVEMGFLEADVTEQLYVELPDGYRDSPSQ--VERLQKATDGLMHTGLLWSKKFSGELIASGFERSQTDPCVFCRKHLGKVGDIIVLYVDDLLVLSESKQDEHQVLEDLRSSFSIKDLGEISYYLGCHITRDRKARTVMFDQQRYAQTVNERFEIRKTSVIPVPTGKSP-LSKADGPQNDAGITEVHGIPYRETVGALLWVANMTRPDLAYTAHTLTKFGDNPGPEHWKTVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPD---TRRSVSGGAVMLGGGAISWFSRAQ 1011
            K R  AKGF Q+ G+   E+ SP     S R+AL + A  DW+  QLDV+  FL   + E++Y+E P G+ +   +  + RL K   GL   G  W+  F   +   G++R   + C++ R H      I+V++VDD+ V+++SK +  +V  +LRS F I +LG +S+ +G  + RDR ARTV   Q     +V  +F ++    +  P   +  L+ AD P +DA   E+  IPYRE +G+L+++A  +RPD+A+    L++F  NPG  HW       +YLK T + G+  GG  + + LS + DA     P     RRS+SG    LG GAISW S+ Q
Sbjct:  121 KARLVAKGFTQVPGVDFHETYSPVTRLKSQRLALHIGATHDWEMEQLDVKTAFLHGVLEEEVYMEQPPGFAEPGKEDFICRLLKGLYGLKQGGRAWNLLFDSIMQELGYKRLDCEWCIYYRTH-SSGRSIVVVHVDDMNVIADSKAEMARVKSELRSHFDIVELGPVSWLVGLAVARDRVARTVTITQTALVDSVITQFGLQDAHPVSTPLDPNVHLTHADCPSDDASRAEMSIIPYRELIGSLMYLAIGSRPDIAHAVQHLSQFNANPGHNHWHGAKHVARYLKGTRTHGLVLGGL-QPLALSGFSDASFGGQPGPAGARRSISGFVFTLGSGAISWSSKRQ 461          
BLAST of mRNA_F-distichus_contig10376.335.1 vs. uniprot
Match: H3H572_PHYRM (Uncharacterized protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H572_PHYRM)

HSP 1 Score: 213 bits (542), Expect = 2.930e-58
Identity = 118/339 (34.81%), Postives = 183/339 (53.98%), Query Frame = 1
Query:    1 KCRFGAKGFHQIKGIHCQESSSPTPTQSSIRIALAVMALLDWKGRQLDVEMGFLEADVTEQLYVELPDGYRDSPSQVERLQKATDGLMHTGLLWSKKFSGELIASGFERSQTDPCVFCRKHLGKVGDIIVLYVDDLLVLSESKQDEHQVLEDLRSSFSIKDLGEISYYLGCHITRDRKARTVMFDQQRYAQTVNERFEIR--KTSVIPVPTGKSPLSKADGPQNDAGITEVHGIPYRETVGALLWVANMTRPDLAYTAHTLTKFGDNPGPEHWKTVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSGGAVMLGGGAISWFSRAQ 1011
            K R  AKGF Q  G+   E+ SP    +SIR+ L+V+    +   QLD +  FL +D+ EQ+++E+P G  ++   + +L KA  GL      W +      +  GF     D CV+ +         + LYVDD+++ +++ ++  +V   L+S+F +K+LGE+ + LG  I  DR A T+M  Q RY   V  RF  +  K  V P  +G   L+K   P  +A   ++   PYR  +G LL++   TRPD+AY    L++F +NPG +HWK  ++ L+YLK T   G+ Y G    + + A+ DAD  S  D RRSVSG  +M+GG  + + S+ Q
Sbjct:  901 KARLVAKGFKQKFGVDFFETYSPVANMNSIRVVLSVVVAKAYVTEQLDADTAFLNSDLKEQVFMEVPYGILNAEHMMCKLDKAIYGLKQAASAWHQTIHAVFMKIGFHSCGADQCVYVKGTKDNYV-YVCLYVDDMIIAAKTNKEIDEVKMALKSAFKMKELGEVKFILGMEIDHDRTASTLMIKQTRYIDDVTSRFNQQDAKAVVNPCESGMK-LTKMQSPTTNAEREDMRNKPYRSLIGCLLYITTCTRPDVAYIVTQLSRFLENPGQQHWKAAIRVLRYLKTTKEFGIVYNGNNGKVAMEAYTDADWGSNLDDRRSVSGIMIMVGGAPVIFKSKYQ 1237          
BLAST of mRNA_F-distichus_contig10376.335.1 vs. uniprot
Match: A0A6H5GGZ1_9HEMI (Integrase catalytic domain-containing protein (Fragment) n=2 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5GGZ1_9HEMI)

HSP 1 Score: 210 bits (535), Expect = 2.500e-57
Identity = 119/342 (34.80%), Postives = 183/342 (53.51%), Query Frame = 1
Query:    1 KCRFGAKGFHQIKGIHCQESSSPTPTQSSIRIALAVMALLDWKGRQLDVEMGFLEADVTEQLYVELPDGYRDSPSQVERLQKATDGLMHTGLLWSKKFSGELIASGFERSQTDPCVFCRKHLGKVGDIIVLYVDDLLVLSESKQDEHQVLEDLRSSFSIKDLGEISYYLGCHITRDRKARTVMFDQQRYAQTVNERFEIRKTSVIPVPT-----GKSPLSKADGPQNDAGITEVHGIPYRETVGALLWVANMTRPDLAYTAHTLTKFGDNPGPEHWKTVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSGGAVMLGGGAISWFSRAQ 1011
            K R   +G  Q+ G+  QE+ SP    SS+R  +++ A+ DW    LDV+  +L  D+ E++YV  P  + +   QV RL+KA  GL   G  W++K +  L    F RS++DPC+F R     +  I+ L+VDD++V S++  ++ +V   L   F +KDLG I   LG ++TRDR  R +  DQ  Y + V +RF +     +  P      G +   K   P N+A       +PY+E +G LL+++ +TRPD+ +  +TL++F  N   +HW  V + ++YLK T    + Y  + E   L+A+ D+D       R SVSG  V L  G ISW SR Q
Sbjct:  892 KARLVVRGCAQVPGLDFQETYSPVVKYSSLRFLMSMAAVKDWDIDHLDVKTAYLYGDLNEEIYVRPPANFSEPDGQVWRLKKAVYGLKQAGRCWNEKITEVLAQMKFHRSKSDPCIFVRNTESAIV-IVALWVDDVIVFSDNAGEKSKVKSSLAHHFEMKDLGPIHRCLGMNVTRDRARRQLSIDQTHYIEQVLKRFSMENCKPVSTPMESDVKGLAMEQKDVQPYNEA-------VPYQEAIGCLLYISQITRPDIIFAVNTLSRFNRNFQLQHWSAVKRIMRYLKGTMYRKLAYSPSEETRNLTAYSDSDWGGVLTDRYSVSGLCVRLNNGLISWASRRQ 1225          
BLAST of mRNA_F-distichus_contig10376.335.1 vs. uniprot
Match: A0A2N9F135_FAGSY (CCHC-type domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9F135_FAGSY)

HSP 1 Score: 209 bits (531), Expect = 3.870e-57
Identity = 116/340 (34.12%), Postives = 191/340 (56.18%), Query Frame = 1
Query:    1 KCRFGAKGFHQIKGIHCQESSSPTPTQSSIRIALAVMALLDWKGRQLDVEMGFLEADVTEQLYVELPDGY--RDSPSQVERLQKATDGLMHTGLLWSKKFSGELIASGFERSQTDPCVFCRKHLGKVGDIIVLYVDDLLVLSESKQDEHQVLEDLRSSFSIKDLGEISYYLGCHITRDRKARTVMFDQQRYAQTVNERFEIRKTSVIPVPTGKS-PLSKADGPQNDAGITEVHGIPYRETVGALLWVANMTRPDLAYTAHTLTKFGDNPGPEHWKTVMKALQYLKRTASLGVTYGGATEDMKLSAWVDADHASCPDTRRSVSGGAVMLGGGAISWFSRAQ 1011
            K R  AKG+ Q KGI  +++ SP    +SIR+ L+++A  D +  Q+DV+  FL  ++ E++Y+  P G+  +    +V RL+++  GL  +   W  +F   + + GFE  + D CV+ ++    +  I+ LYVDD+L+            + L S+F +KD+GE ++ LG  ITRDR  + +   Q  Y + + ERF +  +  I  P  K   LS    P+ND    ++  +PY   +G+L++    TRPD+ +    ++++  NPGP HW+ V + L+YL+ T+   + Y G   D++L+ + DAD AS  D R+S SG A +LGGGA+SW S+ Q
Sbjct:  496 KARLVAKGYTQRKGIDYEDTFSPVVRFASIRLILSIVAKQDLELFQMDVKTAFLNGELDEEIYMAQPAGFEAKGHERKVCRLKRSIYGLKQSSRQWYLRFHDSITSFGFEMIEEDHCVYLKRSKRSIL-ILSLYVDDILLAGNDMDSIVTTKKWLSSTFEMKDMGEANFVLGVKITRDRSKKLLSLSQGTYIKKILERFHMHNSKPIDTPMEKGCTLSLDQCPKNDEEKNQMSKVPYASAIGSLMYAMLCTRPDICFAVGMVSRYQSNPGPAHWRAVKRILRYLRGTSDHALCYHGG--DLRLTGYSDADWASDKDERKSTSGYAFILGGGAVSWCSKKQ 832          
BLAST of mRNA_F-distichus_contig10376.335.1 vs. uniprot
Match: A0A284R853_ARMOS (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Armillaria ostoyae TaxID=47428 RepID=A0A284R853_ARMOS)

HSP 1 Score: 201 bits (510), Expect = 6.690e-57
Identity = 112/338 (33.14%), Postives = 185/338 (54.73%), Query Frame = 1
Query:    1 KCRFGAKGFHQIKGIHCQESSSPTPTQSSIRIALAVMALLDWKGRQLDVEMGFLEADVTEQLYVELPDGYRDSPSQVERLQKATDGLMHTGLLWSKKFSGELIASGFERSQTDPCVFCRKHLGKVGDIIVLYVDDLLVLSESKQDEHQVLEDLRSSFSIKDLGEISYYLGCHITRDRKARTVMFDQQRYAQTVNERFEIRKTSVIPVPTGKSPLSKADGPQNDAGITEVHGIPYRETVGALLWVANMTRPDLAYTAHTLTKFGDNPGPEHWKTVMKALQYLKRTASLGVTYGGATEDMKLSA-WVDADHASCPDTRRSVSGGAVMLGGGAISWFSRAQ 1011
            K R  A+G+ QI G+   E+ +P     S+  AL + A+ D +  Q+DV+  +L  ++ E++Y+  P+GY D   +V RL+K   GL  +G  W+ +F  +L + GF + + D CV+ R   G++  II ++VDDLL+ SE+ +D  +   +L + F +KDLGE    +G  I RDR+  T+   Q++Y + V  RF ++    +      + + K       A    V G  Y+  +G+LL+ A  TRPD+++    L +F  NPGPEHW  + +  +YL  T +L + +    E   +S  + DA  AS PD R+S+SG   ++GG + +W S+ Q
Sbjct:   36 KARLVAQGYSQIPGVDYNETFAPVVRLESVHAALGIAAIKDLEISQMDVKGAYLNGELEEEIYMRQPEGYDDGSGRVCRLRKTLYGLKQSGCEWNWEFDRKLTSIGFSKLEADHCVYKRIREGRM-TIITVWVDDLLIFSETIEDMMETKGELHNLFDVKDLGEPKKIIGIEIKRDRENGTISLSQKQYIEGVLTRFGMQNARPVSTLLDPNVILKKRTDDLIADPAMVGG--YQSVIGSLLYAARGTRPDISHAVQELGQFASNPGPEHWTALKRVCRYLAGTRNLELVFRANEEGEIISTGYSDASFASNPDDRKSISGYTYLIGGASFAWSSKKQ 370          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10376.335.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8K1CTN1_PYTOL1.640e-6236.98Uncharacterized protein n=2 Tax=Pythium oligandrum... [more]
A0A0C3AKI0_9AGAM5.330e-6234.80Uncharacterized protein (Fragment) n=1 Tax=Serendi... [more]
H3G9E3_PHYRM9.890e-6135.59Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A4Y2Q6W6_ARAVE2.840e-5934.30Retrovirus-related Pol polyprotein from transposon... [more]
A0A146H2N5_MYCCL8.690e-5935.88Integrase catalytic domain-containing protein n=1 ... [more]
A0A4Y9ZKD1_9AGAM2.440e-5835.86Reverse transcriptase Ty1/copia-type domain-contai... [more]
H3H572_PHYRM2.930e-5834.81Uncharacterized protein n=2 Tax=Phytophthora ramor... [more]
A0A6H5GGZ1_9HEMI2.500e-5734.80Integrase catalytic domain-containing protein (Fra... [more]
A0A2N9F135_FAGSY3.870e-5734.12CCHC-type domain-containing protein n=1 Tax=Fagus ... [more]
A0A284R853_ARMOS6.690e-5733.14Reverse transcriptase Ty1/copia-type domain-contai... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig10376contigF-distichus_contig10376:10037..11050 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score218.8
Seed ortholog evalue3.9e-54
Seed eggNOG ortholog67593.Physo133076
Hectar predicted targeting categoryother localisation
EggNOG free text desc.transposition, RNA-mediated
EggNOG OGs3QGIS@4776,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Exons1
Model size1014
Cds size1014
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928957.2129197-CDS-F-distichus_contig10376:10036..110501622928957.2129197-CDS-F-distichus_contig10376:10036..11050Fucus distichus monoicousCDSF-distichus_contig10376 10037..11050 -
1690885081.6769812-CDS-F-distichus_contig10376:10036..110501690885081.6769812-CDS-F-distichus_contig10376:10036..11050Fucus distichus monoicousCDSF-distichus_contig10376 10037..11050 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig10376.335.1prot_F-distichus_contig10376.335.1Fucus distichus monoicouspolypeptideF-distichus_contig10376 10037..11050 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-distichus_contig10376.335.1

>prot_F-distichus_contig10376.335.1 ID=prot_F-distichus_contig10376.335.1|Name=mRNA_F-distichus_contig10376.335.1|organism=Fucus distichus monoicous|type=polypeptide|length=338bp
KCRFGAKGFHQIKGIHCQESSSPTPTQSSIRIALAVMALLDWKGRQLDVE
MGFLEADVTEQLYVELPDGYRDSPSQVERLQKATDGLMHTGLLWSKKFSG
ELIASGFERSQTDPCVFCRKHLGKVGDIIVLYVDDLLVLSESKQDEHQVL
EDLRSSFSIKDLGEISYYLGCHITRDRKARTVMFDQQRYAQTVNERFEIR
KTSVIPVPTGKSPLSKADGPQNDAGITEVHGIPYRETVGALLWVANMTRP
DLAYTAHTLTKFGDNPGPEHWKTVMKALQYLKRTASLGVTYGGATEDMKL
SAWVDADHASCPDTRRSVSGGAVMLGGGAISWFSRAQ*
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mRNA from alignment at F-distichus_contig10376:10037..11050-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-distichus_contig10376.335.1 ID=mRNA_F-distichus_contig10376.335.1|Name=mRNA_F-distichus_contig10376.335.1|organism=Fucus distichus monoicous|type=mRNA|length=1014bp|location=Sequence derived from alignment at F-distichus_contig10376:10037..11050- (Fucus distichus monoicous)
AAGTGCCGCTTCGGGGCCAAGGGTTTCCATCAGATCAAGGGGATTCATTG CCAAGAGTCATCGTCGCCGACACCTACACAGTCGAGCATCCGGATAGCGC TGGCGGTGATGGCGCTGTTGGACTGGAAGGGGCGGCAGCTTGACGTAGAA ATGGGGTTTCTCGAGGCGGATGTTACGGAGCAGCTCTACGTTGAGCTCCC CGACGGGTATCGAGACTCGCCGAGTCAGGTTGAACGACTGCAGAAGGCCA CGGACGGGCTGATGCACACCGGACTACTGTGGTCGAAGAAGTTCAGCGGA GAGTTGATAGCGAGCGGATTCGAGAGGTCCCAAACCGATCCCTGTGTGTT CTGTCGGAAGCATCTAGGGAAGGTCGGCGACATTATTGTGCTCTACGTCG ACGATCTACTAGTGCTGAGCGAATCAAAGCAGGACGAGCATCAGGTGCTG GAAGACCTTCGATCAAGCTTCTCAATCAAGGATCTAGGCGAGATCTCGTA CTACCTGGGATGTCACATTACTCGGGATCGCAAGGCCAGGACGGTGATGT TCGATCAGCAGCGTTACGCGCAGACGGTAAACGAGCGATTCGAAATTCGG AAGACCAGCGTGATCCCTGTTCCTACGGGAAAATCGCCACTTTCGAAGGC AGACGGGCCGCAAAACGACGCTGGGATCACAGAGGTGCATGGCATCCCGT ATCGCGAGACAGTGGGGGCACTGTTATGGGTAGCCAACATGACTCGGCCT GACCTAGCTTACACCGCGCACACGCTCACCAAGTTCGGGGACAACCCCGG GCCCGAGCACTGGAAGACAGTAATGAAAGCGCTACAATACCTGAAACGAA CGGCGAGCCTAGGGGTAACATATGGAGGCGCGACGGAGGACATGAAGCTA TCGGCATGGGTGGACGCCGATCACGCATCATGCCCTGATACGCGCCGTTC GGTATCGGGGGGCGCGGTGATGCTCGGTGGAGGAGCAATCAGTTGGTTTT CGCGGGCGCAGTGA
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Coding sequence (CDS) from alignment at F-distichus_contig10376:10037..11050-

>mRNA_F-distichus_contig10376.335.1 ID=mRNA_F-distichus_contig10376.335.1|Name=mRNA_F-distichus_contig10376.335.1|organism=Fucus distichus monoicous|type=CDS|length=2028bp|location=Sequence derived from alignment at F-distichus_contig10376:10037..11050- (Fucus distichus monoicous)
AAGTGCCGCTTCGGGGCCAAGGGTTTCCATCAGATCAAGGGGATTCATTG
CCAAGAGTCATCGTCGCCGACACCTACACAGTCGAGCATCCGGATAGCGC
TGGCGGTGATGGCGCTGTTGGACTGGAAGGGGCGGCAGCTTGACGTAGAA
ATGGGGTTTCTCGAGGCGGATGTTACGGAGCAGCTCTACGTTGAGCTCCC
CGACGGGTATCGAGACTCGCCGAGTCAGGTTGAACGACTGCAGAAGGCCA
CGGACGGGCTGATGCACACCGGACTACTGTGGTCGAAGAAGTTCAGCGGA
GAGTTGATAGCGAGCGGATTCGAGAGGTCCCAAACCGATCCCTGTGTGTT
CTGTCGGAAGCATCTAGGGAAGGTCGGCGACATTATTGTGCTCTACGTCG
ACGATCTACTAGTGCTGAGCGAATCAAAGCAGGACGAGCATCAGGTGCTG
GAAGACCTTCGATCAAGCTTCTCAATCAAGGATCTAGGCGAGATCTCGTA
CTACCTGGGATGTCACATTACTCGGGATCGCAAGGCCAGGACGGTGATGT
TCGATCAGCAGCGTTACGCGCAGACGGTAAACGAGCGATTCGAAATTCGG
AAGACCAGCGTGATCCCTGTTCCTACGGGAAAATCGCCACTTTCGAAGGC
AGACGGGCCGCAAAACGACGCTGGGATCACAGAGGTGCATGGCATCCCGT
ATCGCGAGACAGTGGGGGCACTGTTATGGGTAGCCAACATGACTCGGCCT
GACCTAGCTTACACCGCGCACACGCTCACCAAGTTCGGGGACAACCCCGG
GCCCGAGCACTGGAAGACAGTAATGAAAGCGCTACAATACCTGAAACGAA
CGGCGAGCCTAGGGGTAACATATGGAGGCGCGACGGAGGACATGAAGCTA
TCGGCATGGGTGGACGCCGATCACGCATCATGCCCTGATACGCGCCGTTC
GGTATCGGGGGGCGCGGTGATGCTCGGTGGAGGAGCAATCAGTTGGTTTT
CGCGGGCGCAGTGAAAGTGCCGCTTCGGGGCCAAGGGTTTCCATCAGATC
AAGGGGATTCATTGCCAAGAGTCATCGTCGCCGACACCTACACAGTCGAG
CATCCGGATAGCGCTGGCGGTGATGGCGCTGTTGGACTGGAAGGGGCGGC
AGCTTGACGTAGAAATGGGGTTTCTCGAGGCGGATGTTACGGAGCAGCTC
TACGTTGAGCTCCCCGACGGGTATCGAGACTCGCCGAGTCAGGTTGAACG
ACTGCAGAAGGCCACGGACGGGCTGATGCACACCGGACTACTGTGGTCGA
AGAAGTTCAGCGGAGAGTTGATAGCGAGCGGATTCGAGAGGTCCCAAACC
GATCCCTGTGTGTTCTGTCGGAAGCATCTAGGGAAGGTCGGCGACATTAT
TGTGCTCTACGTCGACGATCTACTAGTGCTGAGCGAATCAAAGCAGGACG
AGCATCAGGTGCTGGAAGACCTTCGATCAAGCTTCTCAATCAAGGATCTA
GGCGAGATCTCGTACTACCTGGGATGTCACATTACTCGGGATCGCAAGGC
CAGGACGGTGATGTTCGATCAGCAGCGTTACGCGCAGACGGTAAACGAGC
GATTCGAAATTCGGAAGACCAGCGTGATCCCTGTTCCTACGGGAAAATCG
CCACTTTCGAAGGCAGACGGGCCGCAAAACGACGCTGGGATCACAGAGGT
GCATGGCATCCCGTATCGCGAGACAGTGGGGGCACTGTTATGGGTAGCCA
ACATGACTCGGCCTGACCTAGCTTACACCGCGCACACGCTCACCAAGTTC
GGGGACAACCCCGGGCCCGAGCACTGGAAGACAGTAATGAAAGCGCTACA
ATACCTGAAACGAACGGCGAGCCTAGGGGTAACATATGGAGGCGCGACGG
AGGACATGAAGCTATCGGCATGGGTGGACGCCGATCACGCATCATGCCCT
GATACGCGCCGTTCGGTATCGGGGGGCGCGGTGATGCTCGGTGGAGGAGC
AATCAGTTGGTTTTCGCGGGCGCAGTGA
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