mRNA_F-distichus_contig10335.295.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig10335.295.1 vs. uniprot
Match: D7FS12_ECTSI (Putative NIN-like transcription factor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS12_ECTSI) HSP 1 Score: 72.0 bits (175), Expect = 6.850e-13 Identity = 37/70 (52.86%), Postives = 47/70 (67.14%), Query Frame = 1
Query: 34 KRQTAQDVVAKLPLERLEGAFRKTLKNASAMLGVSTSTLKKLCRERGVSRWPYRQVISLDRKILSIEQKL 243
KRQT++DV A+LPLE LE + L A+ L VS + LKKLCR GV RWP+RQV SLD+ +E K+
Sbjct: 464 KRQTSEDVAARLPLEVLECFYHVPLNVAAQQLNVSLTMLKKLCRAYGVKRWPHRQVSSLDKTTSKLEDKI 533
BLAST of mRNA_F-distichus_contig10335.295.1 vs. uniprot
Match: A0A6H5KE17_9PHAE (RWP-RK domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE17_9PHAE) HSP 1 Score: 72.0 bits (175), Expect = 6.930e-13 Identity = 37/70 (52.86%), Postives = 47/70 (67.14%), Query Frame = 1
Query: 34 KRQTAQDVVAKLPLERLEGAFRKTLKNASAMLGVSTSTLKKLCRERGVSRWPYRQVISLDRKILSIEQKL 243
KRQT++DV A+LPLE LE + L A+ L VS + LKKLCR GV RWP+RQV SLD+ +E K+
Sbjct: 464 KRQTSEDVAARLPLEVLECFYHVPLNVAAQQLNVSLTMLKKLCRAYGVKRWPHRQVSSLDKTTSKLEDKI 533
BLAST of mRNA_F-distichus_contig10335.295.1 vs. uniprot
Match: A0A7S0M8M4_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0M8M4_9CRYP) HSP 1 Score: 58.2 bits (139), Expect = 1.280e-8 Identity = 25/56 (44.64%), Postives = 38/56 (67.86%), Query Frame = 1
Query: 55 VVAKLPLERLEGAFRKTLKNASAMLGVSTSTLKKLCRERGVSRWPYRQVISLDRKI 222
++AKLP ERL+ + + LG+ ++LKK+CR G+SRWPYR++ SL RK+
Sbjct: 88 LLAKLPAERLQHYLHLPARQVALSLGICLTSLKKICRHHGISRWPYRRIKSLSRKM 143
BLAST of mRNA_F-distichus_contig10335.295.1 vs. uniprot
Match: F2DK96_HORVV (Predicted protein n=3 Tax=Hordeum vulgare subsp. vulgare TaxID=112509 RepID=F2DK96_HORVV) HSP 1 Score: 59.7 bits (143), Expect = 1.480e-8 Identity = 25/70 (35.71%), Postives = 47/70 (67.14%), Query Frame = 1
Query: 28 RTKRQTAQDVVAKLPLERLEGAFRKTLKNASAMLGVSTSTLKKLCRERGVSRWPYRQVISLDRKILSIEQ 237
+TK++T + + L L+G F +LK+A+ LGV +T+K++CR+ G+SRWP+R++ ++R + I +
Sbjct: 486 KTKKKTGRKAGRPISLNELQGYFSGSLKDAARSLGVCPTTMKRICRQHGISRWPFRKISKVNRALGKIRR 555
BLAST of mRNA_F-distichus_contig10335.295.1 vs. uniprot
Match: A0A8K1C321_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C321_PYTOL) HSP 1 Score: 58.9 bits (141), Expect = 1.760e-8 Identity = 24/54 (44.44%), Postives = 40/54 (74.07%), Query Frame = 1
Query: 82 LEGAFRKTLKNASAMLGVSTSTLKKLCRERGVSRWPYRQVISLDRKILSIEQKL 243
L+ F K L++A+ G+ T+ LKK+CR+ G++ WPYRQ+I L++ I S+EQ++
Sbjct: 84 LQEHFHKPLRDAAQHFGICTTLLKKICRKNGITSWPYRQIIGLEKSISSMEQQV 137
BLAST of mRNA_F-distichus_contig10335.295.1 vs. uniprot
Match: A0A0Q3PUU3_BRADI (Uncharacterized protein n=2 Tax=Brachypodium distachyon TaxID=15368 RepID=A0A0Q3PUU3_BRADI) HSP 1 Score: 58.5 bits (140), Expect = 3.790e-8 Identity = 27/78 (34.62%), Postives = 49/78 (62.82%), Query Frame = 1
Query: 4 GSGKTGSDRTKRQTAQDVVAKLPLERLEGAFRKTLKNASAMLGVSTSTLKKLCRERGVSRWPYRQVISLDRKILSIEQ 237
G G S K++T + + L+ L+G F +LK+A+ LGV +T+K++CR+ G+SRWP+R++ ++R + I +
Sbjct: 490 GVGDGVSQPEKKKTGRKAGKPVGLKELQGYFSGSLKDAARSLGVCPTTMKRICRQHGISRWPFRKISKVNRALSKIRR 567
BLAST of mRNA_F-distichus_contig10335.295.1 vs. uniprot
Match: A0A4D8ZYZ6_SALSN (Uncharacterized protein n=2 Tax=Salvia splendens TaxID=180675 RepID=A0A4D8ZYZ6_SALSN) HSP 1 Score: 57.8 bits (138), Expect = 7.100e-8 Identity = 26/70 (37.14%), Postives = 49/70 (70.00%), Query Frame = 1
Query: 34 KRQTAQDVVAKLPLERLEGAFRKTLKNASAMLGVSTSTLKKLCRERGVSRWPYRQVISLDRKILSIEQKL 243
KR T++ ++ L L+ F ++LK+A++ LGV ++TLK++CR+ G++RWP+R++ +DR + I+ L
Sbjct: 459 KRNTSEKNIS---LNVLQKYFSRSLKDAASSLGVCSTTLKRICRQHGIARWPFRKIKKVDRSLKKIQGML 525
BLAST of mRNA_F-distichus_contig10335.295.1 vs. uniprot
Match: A0A6P8EGQ1_PUNGR (protein NLP9-like n=3 Tax=Punica granatum TaxID=22663 RepID=A0A6P8EGQ1_PUNGR) HSP 1 Score: 57.8 bits (138), Expect = 7.150e-8 Identity = 30/81 (37.04%), Postives = 48/81 (59.26%), Query Frame = 1
Query: 1 MGSGKTGSDRTKRQTAQDVVAKLPLERLEGAFRKTLKNASAMLGVSTSTLKKLCRERGVSRWPYRQVISLDRKILSIEQKL 243
M SG KR TA+ V+ L L+ F +LK+A+ +GV +TLK++CR+ G+SRWP R++ ++R + I+ L
Sbjct: 557 MASGSNRQQEKKRSTAEKTVS---LSVLQQYFSGSLKDAAKSIGVCPTTLKRICRQHGISRWPSRKINKVNRSLRKIQTVL 634
BLAST of mRNA_F-distichus_contig10335.295.1 vs. uniprot
Match: A0A3N7H6Q5_POPTR (Uncharacterized protein n=2 Tax=Populus trichocarpa TaxID=3694 RepID=A0A3N7H6Q5_POPTR) HSP 1 Score: 57.0 bits (136), Expect = 1.300e-7 Identity = 28/79 (35.44%), Postives = 48/79 (60.76%), Query Frame = 1
Query: 1 MGSGKTGSDRTKRQTAQDVVAKLPLERLEGAFRKTLKNASAMLGVSTSTLKKLCRERGVSRWPYRQVISLDRKILSIEQ 237
+GS KTG K++ + + + LE L F +LK+AS LGV ++TLK++CR+ G+ RWP R++ + + ++Q
Sbjct: 210 LGSRKTG----KKRRTKTAIQTISLEVLRRYFAGSLKDASQSLGVCSTTLKRICRQHGIKRWPSRKINKVGHSLRKLQQ 284
BLAST of mRNA_F-distichus_contig10335.295.1 vs. uniprot
Match: A0A0P0VEJ5_ORYSJ (Os02g0136000 protein n=11 Tax=Oryza TaxID=4527 RepID=A0A0P0VEJ5_ORYSJ) HSP 1 Score: 56.6 bits (135), Expect = 1.810e-7 Identity = 26/72 (36.11%), Postives = 47/72 (65.28%), Query Frame = 1
Query: 7 SGKTGSDRTKRQTAQDVVAKLPLERLEGAFRKTLKNASAMLGVSTSTLKKLCRERGVSRWPYRQVISLDRKI 222
+ + G ++TKR A+ V LE L+ F +LK+A+ LGV +T+K++CR+ G+ RWP+R++ ++R +
Sbjct: 477 TSQVGKNKTKRGKAEKSVT---LEELQKHFSGSLKDAARSLGVCPTTMKRICRQHGIPRWPFRKISKVNRSL 545 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10335.295.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig10335.295.1 >prot_F-distichus_contig10335.295.1 ID=prot_F-distichus_contig10335.295.1|Name=mRNA_F-distichus_contig10335.295.1|organism=Fucus distichus monoicous|type=polypeptide|length=81bp MGSGKTGSDRTKRQTAQDVVAKLPLERLEGAFRKTLKNASAMLGVSTSTLback to top mRNA from alignment at F-distichus_contig10335:6375..6617- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig10335.295.1 ID=mRNA_F-distichus_contig10335.295.1|Name=mRNA_F-distichus_contig10335.295.1|organism=Fucus distichus monoicous|type=mRNA|length=243bp|location=Sequence derived from alignment at F-distichus_contig10335:6375..6617- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig10335:6375..6617- >mRNA_F-distichus_contig10335.295.1 ID=mRNA_F-distichus_contig10335.295.1|Name=mRNA_F-distichus_contig10335.295.1|organism=Fucus distichus monoicous|type=CDS|length=486bp|location=Sequence derived from alignment at F-distichus_contig10335:6375..6617- (Fucus distichus monoicous)back to top |