prot_F-distichus_contig99983.19427.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig99983.19427.1
Unique Nameprot_F-distichus_contig99983.19427.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length198
Homology
BLAST of mRNA_F-distichus_contig99983.19427.1 vs. uniprot
Match: A0A8J5A0W8_9CHEL (RNA-directed DNA polymerase n=2 Tax=Nymphon striatum TaxID=424472 RepID=A0A8J5A0W8_9CHEL)

HSP 1 Score: 112 bits (281), Expect = 2.450e-25
Identity = 63/196 (32.14%), Postives = 99/196 (50.51%), Query Frame = 0
Query:    3 DGTRLIVKDETEILIPKAIREEMIRVLHLSHSGDIAMVTQARNKIFWPGMKRDLKKIYDECPTCQENKPSKASEHNEISQDDIFENFIPGQMVELDYAQKGSNDYLMIICALTGFMQAYKTSNKGTDEAIKCLRTWSSQYGKPYTAKSDEGPAFRVTWEEELAQLGVRVAHSSCYNPQSNGLVERSVRTLKEILAK 198
            D   L++     I++P+ IR E++R+LHL H G +     AR   +WPG+   +  + D C TC E +PS++  H  + +  I   ++P   V +D        Y++++   +GF+   K +N  T    K L  W   +G P   +SD GP FR  + E   Q  ++   SS YNP SNGL E +V+  K +L K
Sbjct:  991 DKHTLVLLSGHRIVVPRDIRSEILRMLHLPHQGLVKTKQLARQCYYWPGINASITNLIDGCLTCLEFQPSQS--HEPLLESTIP--YVPMTHVGVDLFDALGKSYVVMVDRFSGFLFVSKITNSSTSTVTKILLKWFCDFGYPDVIRSDGGPCFRSEFSEICNQYFIKHELSSAYNPSSNGLAEAAVKNAKILLQK 1182          
BLAST of mRNA_F-distichus_contig99983.19427.1 vs. uniprot
Match: UPI001ED869F4 (uncharacterized protein K02A2.6-like n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED869F4)

HSP 1 Score: 102 bits (255), Expect = 7.380e-22
Identity = 58/185 (31.35%), Postives = 101/185 (54.59%), Query Frame = 0
Query:   15 ILIPKAIREEMIRVLHLSHSGDIAMVTQARNKIFWPGMKRDLKKIYDECPTCQENKPSKASEHNEISQDDIFENFIPGQMVELDYAQKGSNDYLMIICALTGFMQAYKTSNKGTDEAIKCLRTWSSQYGKPYTAKSDEGPAFRVTWEEELAQL-GVRVAHSSCYNPQSNGLVERSVRTLKEILAK 198
            ++IP A+R +++R+LH  H G   M  QAR++++WPG+ +D+++I   C TCQ  + + +     +S         P + + LD+     ++ L+++ + + +++ +  S       I  LR + + +G P    +D GP F+     E  +  G++V  S  Y+P SNGL ERSVRTLKE L K
Sbjct:  940 VVIPLALRGQVLRLLHDQHIGIARMKLQARSQVWWPGIDKDVEEIATNCETCQATQANISKGKYLVSWPKTNS---PWERIHLDFCHFQGHEILVLVDSFSRWIETWVMSRTNAQNTILKLRGFMAVFGIPQEIVTDNGPPFQSREFLEFCEKNGIKVTKSPPYHPASNGLAERSVRTLKESLGK 1121          
BLAST of mRNA_F-distichus_contig99983.19427.1 vs. uniprot
Match: A0A6M2D637_RHIMP (RNA-directed DNA polymerase (Fragment) n=1 Tax=Rhipicephalus microplus TaxID=6941 RepID=A0A6M2D637_RHIMP)

HSP 1 Score: 100 bits (248), Expect = 4.880e-21
Identity = 58/182 (31.87%), Postives = 100/182 (54.95%), Query Frame = 0
Query:   15 ILIPKAIREEMIRVLHLSHSGDIAMVTQARNKIFWPGMKRDLKKIYDECPTCQENKPSKASEHNEISQDDIFENFIPGQMVELDYAQKGSNDYLMIIC-ALTGFMQAYKTSNKGTDEAIKCLRTWSSQYGKPYTAKSDEGPAFR-VTWEEELAQLGVRVAHSSCYNPQSNGLVERSVRTLKE 194
            ++IP+  RE+++++LH SH G   M T+AR   +WPG+ +D+++   +C  C +  P    E N +S     E +     +  DYA   SN  L++I  A + +++A   S    +  +  +RT  S++G P+T  +D G  F    + + + + G+    +  Y+PQSNGL ER+VRTLK+
Sbjct:  195 VVIPRTAREKLLKLLHESHQGASTMKTRARVSFWWPGLDQDIQRAASDCKNCVQALPM-PPERNRVSWPISRERW---SRLHADYAGPISNKMLLVIVDAHSNWIEAIPVSRATANATVDSMRTLFSRFGLPHTIVTDNGTPFTGAEFAQFVQKNGIEHIRTPPYHPQSNGLAERAVRTLKD 372          
BLAST of mRNA_F-distichus_contig99983.19427.1 vs. uniprot
Match: UPI00188832B2 (uncharacterized protein K02A2.6-like n=1 Tax=Rhipicephalus microplus TaxID=6941 RepID=UPI00188832B2)

HSP 1 Score: 98.6 bits (244), Expect = 1.330e-20
Identity = 56/185 (30.27%), Postives = 101/185 (54.59%), Query Frame = 0
Query:   16 LIPKAIREEMIRVLHLSHSGDIAMVTQARNKIFWPGMKRDLKKIYDECPTCQENKPSKASEHNEISQDDIFENFIPGQMVELDYAQKGSNDYLMIIC-ALTGFMQAYKTSNKGTDEAIKCLRTWSSQYGKPYTAKSDEGPAFRVT-WEEELAQLGVRVAHSSCYNPQSNGLVERSVRTLKEILAK 198
            ++P A R +++R+LH +H G   M  +AR+  +WPG+++D++++   C  C +  P   +    ++  +  E +     + +DYA       L+I+  A T +++A   S   +   ++ LRT  S++G P T  SD G  F    +E+ + + G+    +  Y+PQSNGL ER+VRT+K+ L K
Sbjct:  125 VVPTAARGKLLRLLHEAHQGISTMKAKARSLFWWPGVEQDIERVAATCQNCVQALPMAQAAKEPVNWPETHERW---SRLHVDYAGPVKGKMLLIVVDAHTKWIEALPVSQANSHSTVEALRTIFSRFGIPRTVVSDNGTPFTAREFEQFMERNGIAHIRTPPYHPQSNGLAERAVRTIKDGLKK 306          
BLAST of mRNA_F-distichus_contig99983.19427.1 vs. uniprot
Match: UPI001ED894FB (uncharacterized protein K02A2.6-like n=1 Tax=Ischnura elegans TaxID=197161 RepID=UPI001ED894FB)

HSP 1 Score: 99.0 bits (245), Expect = 1.410e-20
Identity = 55/185 (29.73%), Postives = 99/185 (53.51%), Query Frame = 0
Query:   15 ILIPKAIREEMIRVLHLSHSGDIAMVTQARNKIFWPGMKRDLKKIYDECPTCQENKPSKASEHNEISQDDIFENFIPGQMVELDYAQKGSNDYLMIICALTGFMQAYKTSNKGTDEAIKCLRTWSSQYGKPYTAKSDEGPAFR-VTWEEELAQLGVRVAHSSCYNPQSNGLVERSVRTLKEILAK 198
            +++P+ +R +++++LH  H G + M   AR  I+WPG+++D++ +   C TC   +   + +   +   +  +   P + V LD      +  L+++ + + +M+A+        + I  LR + + +G P    SD GP F+ V +     Q  ++V  S  Y+PQSNGL ER VRT+KE LAK
Sbjct:  295 VVVPRVLRGKVLQMLHEQHIGIVRMKLLARQTIWWPGVEKDIEDVIVNCETCLVTQTRVSQQKYLVPWSETMQ---PWERVHLDLLSFQGHHILVLVDSYSKWMEAWLMEGTSAQKVILKLREFMAVFGIPQEIVSDNGPPFQSVEFTLFCKQNNIKVTKSPPYHPQSNGLAERGVRTIKENLAK 476          
BLAST of mRNA_F-distichus_contig99983.19427.1 vs. uniprot
Match: UPI000C6D37D9 (LOW QUALITY PROTEIN: uncharacterized protein K02A2.6-like n=1 Tax=Centruroides sculpturatus TaxID=218467 RepID=UPI000C6D37D9)

HSP 1 Score: 98.2 bits (243), Expect = 2.950e-20
Identity = 56/185 (30.27%), Postives = 96/185 (51.89%), Query Frame = 0
Query:   15 ILIPKAIREEMIRVLHLSHSGDIAMVTQARNKIFWPGMKRDLKKIYDECPTCQENKPSKASEHNEISQDDIFENFIPGQMVELDYAQKGSNDYLMIICALTGFMQAYKTSNKGTDEAIKCLRTWSSQYGKPYTAKSDEGPAFR-VTWEEELAQLGVRVAHSSCYNPQSNGLVERSVRTLKEILAK 198
            I+IP+  R  +++ +H +H G  A +++ARNK++WPGM RD+++    C  CQ  +P++  E     +   +    P Q    D     S+ YL+I+   + + + YK  +    + I   +   S++G P    +D GP F  V +     +  ++ + SS   PQSNG +ER V+T+K IL K
Sbjct:  928 IIIPEKQRTRVLQQIHAAHLGINASLSRARNKVYWPGMNRDIEEAVKSCRQCQRFRPAQTKEPLIPHRIPTY----PWQEATADIFYLASSPYLLIVDRYSAYPEVYKMPSTDASKVIPKFKETFSRFGSPEILMTDNGPPFSSVAFNRFCDKWSIKHSTSSPRYPQSNGHIERHVQTIKNILKK 1108          
BLAST of mRNA_F-distichus_contig99983.19427.1 vs. uniprot
Match: UPI001EAFE025 (uncharacterized protein K02A2.6-like n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI001EAFE025)

HSP 1 Score: 97.4 bits (241), Expect = 5.330e-20
Identity = 60/196 (30.61%), Postives = 96/196 (48.98%), Query Frame = 0
Query:    8 IVKDETEILIPKAIREEMIRVLHLSHSGDIAMVTQARNKIFWPGMKRDLKKIYDECPTC----QENKPSKASEHNEISQDDIFENFIPGQMVELDYAQKGSNDYLMIICALTGFMQAYKTSNKGTDEAIKCLRTWSSQYGKPYTAKSDEGPAFRVTWEEELA-QLGVRVAHSSCYNPQSNGLVERSVRTLKEILAK 198
            +V     I++PK +R+ M++ +H  H G      +AR  +FWP M  D+  +   C TC      ++P   S H   +Q        P Q V  D  +  S DYL+++ A + F +     N+ +   IK LR+  +++G P    SD GP +      + A +   + + SS   PQSNGL ER+V+T+K I+ K
Sbjct:  704 VVFKGNRIVVPKGMRKLMLQKIHAGHLGQEKCKQRAREVLFWPRMNHDVDVMVSGCETCLNYRHRHQPEPLSPHPVATQ--------PWQYVSTDLFELYSKDYLLVVDAYSNFPEVIALPNQSSQAVIKALRSIFARHGSPVELFSDNGPCYASAEFADFAVEWDFKHSTSSPKYPQSNGLAERTVQTVKNIMKK 891          
BLAST of mRNA_F-distichus_contig99983.19427.1 vs. uniprot
Match: UPI001EAF9A05 (uncharacterized protein K02A2.6-like n=4 Tax=Haliotis rufescens TaxID=6454 RepID=UPI001EAF9A05)

HSP 1 Score: 97.1 bits (240), Expect = 7.190e-20
Identity = 60/196 (30.61%), Postives = 96/196 (48.98%), Query Frame = 0
Query:    8 IVKDETEILIPKAIREEMIRVLHLSHSGDIAMVTQARNKIFWPGMKRDLKKIYDECPTC----QENKPSKASEHNEISQDDIFENFIPGQMVELDYAQKGSNDYLMIICALTGFMQAYKTSNKGTDEAIKCLRTWSSQYGKPYTAKSDEGPAFRVTWEEELA-QLGVRVAHSSCYNPQSNGLVERSVRTLKEILAK 198
            +V     I++PK +R+ M++ +H  H G      +AR  +FWP M  D+  +   C TC      ++P   S H   +Q        P Q V  D  +  S DYL+++ A + F +     N+ +   IK LR+  +++G P    SD GP +      + A +   + + SS   PQSNGL ER+V+T+K I+ K
Sbjct:  648 VVFKGNRIVVPKGMRKLMLQKIHAGHLGQEKCKQRAREVLFWPRMNHDVDVMVSGCETCLNYRHRHQPEPLSPHPVATQ--------PWQHVSTDLFELYSKDYLLVVDAYSNFPEVIALPNQSSQAVIKALRSIFARHGSPVELFSDNGPCYASAEFADFAVEWDFKHSTSSPKYPQSNGLAERTVQTVKNIMKK 835          
BLAST of mRNA_F-distichus_contig99983.19427.1 vs. uniprot
Match: UPI00165B1E81 (uncharacterized protein K02A2.6-like n=1 Tax=Fundulus heteroclitus TaxID=8078 RepID=UPI00165B1E81)

HSP 1 Score: 97.1 bits (240), Expect = 7.420e-20
Identity = 59/188 (31.38%), Postives = 101/188 (53.72%), Query Frame = 0
Query:   15 ILIPKAIREEMIRVLHLSHSGDIAMVTQARNKIFWPGMKRDLKKIYDECPTCQENKPSKASEHNEISQDDIFENFIPGQ---MVELDYAQKGSNDYLMIICALTGFMQAYKTSNKGTDEAIKCLRTWSSQYGKPYTAKSDEGPAFRVTWEEELAQ-LGVRVAHSSCYNPQSNGLVERSVRTLKEILAK 198
            ++IPK++R +++  LH  H G      +A+  ++WPG+ +DL K+ D C TC       A E  + +++ +  + +P +    V  D  Q G N YL+++   + F +  K S+  ++  I   ++  +++G P   +SD GP F     +E AQ  G     SS + PQSNG VER++RT+K +L K
Sbjct:  936 LVIPKSLRLDILNKLHEGHLGITKCRERAKQSVWWPGLSKDLSKLVDNCDTC-------ACERIQ-NKETMLASDLPSRPWCKVGADLFQLGKNQYLVLVDYFSRFFEIAKLSSTTSEAVIDHCKSIFARHGIPEIVRSDNGPQFASVAFQEFAQNWGFSHVTSSPHFPQSNGEVERAIRTIKSLLKK 1115          
BLAST of mRNA_F-distichus_contig99983.19427.1 vs. uniprot
Match: A0A267E4F1_9PLAT (RNA-directed DNA polymerase (Fragment) n=6 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267E4F1_9PLAT)

HSP 1 Score: 97.1 bits (240), Expect = 7.430e-20
Identity = 60/189 (31.75%), Postives = 97/189 (51.32%), Query Frame = 0
Query:    8 IVKDETEILIPKAIREEMIRVLHLSHSGDIAMVTQARNKIFWPGMKRDLKKIYDECPTCQENKPSKASEHNEISQDDIFENFIPGQMVELDYAQKGSNDYLMIIC-ALTGFMQAYKTSNKGTDEAIKCLRTWSSQYGKPYTAKSDEGPAF-RVTWEEELAQLGVRVAHSSCYNPQSNGLVERSVRTLKE 194
            +V  E  +++PK +R   ++  H +H G     +  R + +WPG+ RD+K++   C TC   K  KAS  N +       +   G+ V  D+A      YL+++  A++ + + + T+N  +   I  LR   SQ+G P T  +D GP+F      + L  +G     +  Y+PQSNGL ER VRT+KE
Sbjct:  979 VVLREMRVILPKTLRLSAVQTAHSTHLGIGRTKSLLRAQFWWPGLDRDVKQLIGNCKTC---KMVKASNRNYLKSWPTAMD--AGERVHADFAGPIDGQYLLVLVDAMSNYPEVHLTANMESSTVISRLRRTFSQWGVPRTLVTDNGPSFVSAETTQWLKAIGCSHVTTPPYHPQSNGLAERFVRTMKE 1162          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig99983.19427.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8J5A0W8_9CHEL2.450e-2532.14RNA-directed DNA polymerase n=2 Tax=Nymphon striat... [more]
UPI001ED869F47.380e-2231.35uncharacterized protein K02A2.6-like n=1 Tax=Ischn... [more]
A0A6M2D637_RHIMP4.880e-2131.87RNA-directed DNA polymerase (Fragment) n=1 Tax=Rhi... [more]
UPI00188832B21.330e-2030.27uncharacterized protein K02A2.6-like n=1 Tax=Rhipi... [more]
UPI001ED894FB1.410e-2029.73uncharacterized protein K02A2.6-like n=1 Tax=Ischn... [more]
UPI000C6D37D92.950e-2030.27LOW QUALITY PROTEIN: uncharacterized protein K02A2... [more]
UPI001EAFE0255.330e-2030.61uncharacterized protein K02A2.6-like n=1 Tax=Halio... [more]
UPI001EAF9A057.190e-2030.61uncharacterized protein K02A2.6-like n=4 Tax=Halio... [more]
UPI00165B1E817.420e-2031.38uncharacterized protein K02A2.6-like n=1 Tax=Fundu... [more]
A0A267E4F1_9PLAT7.430e-2031.75RNA-directed DNA polymerase (Fragment) n=6 Tax=Mac... [more]

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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041588Integrase zinc-binding domainPFAMPF17921Integrase_H2C2coord: 17..72
e-value: 2.9E-14
score: 52.9
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 102..194
e-value: 1.0E-13
score: 51.5
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 87..198
score: 17.555
NoneNo IPR availableGENE3D1.10.340.70coord: 2..70
e-value: 6.3E-11
score: 44.3
NoneNo IPR availablePANTHERPTHR24559:SF275coord: 11..197
NoneNo IPR availablePANTHERPTHR24559FAMILY NOT NAMEDcoord: 11..197
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 87..198
e-value: 3.0E-21
score: 77.5
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 93..197

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR041588Integrase zinc-binding domainPFAMPF17921Integrase_H2C2coord: 17..72
e-value: 2.9E-14
score: 52.9
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 102..194
e-value: 1.0E-13
score: 51.5
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 87..198
score: 17.555
NoneNo IPR availableGENE3D1.10.340.70coord: 2..70
e-value: 6.3E-11
score: 44.3
NoneNo IPR availablePANTHERPTHR24559:SF275coord: 11..197
NoneNo IPR availablePANTHERPTHR24559FAMILY NOT NAMEDcoord: 11..197
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 87..198
e-value: 3.0E-21
score: 77.5
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 93..197

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig99983contigF-distichus_contig99983:486..1079 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig99983.19427.1mRNA_F-distichus_contig99983.19427.1Fucus distichus monoicousmRNAF-distichus_contig99983 486..1079 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig99983.19427.1 ID=prot_F-distichus_contig99983.19427.1|Name=mRNA_F-distichus_contig99983.19427.1|organism=Fucus distichus monoicous|type=polypeptide|length=198bp
MTDGTRLIVKDETEILIPKAIREEMIRVLHLSHSGDIAMVTQARNKIFWP
GMKRDLKKIYDECPTCQENKPSKASEHNEISQDDIFENFIPGQMVELDYA
QKGSNDYLMIICALTGFMQAYKTSNKGTDEAIKCLRTWSSQYGKPYTAKS
DEGPAFRVTWEEELAQLGVRVAHSSCYNPQSNGLVERSVRTLKEILAK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR041588Integrase_H2C2
IPR001584Integrase_cat-core
IPR036397RNaseH_sf
IPR012337RNaseH-like_sf