mRNA_F-distichus_contig9836.19274.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig9836.19274.1 vs. uniprot
Match: D7FVZ9_ECTSI (Poly [ADP-ribose] polymerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVZ9_ECTSI) HSP 1 Score: 135 bits (341), Expect = 1.030e-34 Identity = 70/125 (56.00%), Postives = 86/125 (68.80%), Query Frame = 1
Query: 1 IQNERDLFHGAKSESIPNICTMGFDKRLAGSRNGAMYGKGCYFTQNAGVAARYMDSPN-RGQMIMAKVLVGRFTQGRKHMVRPPLIGDSDGHRSFDSTVDNVAQPKTFVTYMDWQAYPMYLITFG 372
I NE LFHGA+S +I I GF+KRLAGS NGA +G+GCYF ++A +AA+YM P GQMIMAKVLVG F +G M+ PP +G G R +D+T ++ P VTY DWQAYPMYLITF
Sbjct: 537 IGNEHMLFHGARSHAINTIMRTGFEKRLAGSTNGAKFGQGCYFARDALLAAQYMAKPPCGGQMIMAKVLVGEFVRGDASMLIPPKMGT--GERHYDTTTNDDYAPSLIVTYKDWQAYPMYLITFA 659
BLAST of mRNA_F-distichus_contig9836.19274.1 vs. uniprot
Match: C3Y5X3_BRAFL (Poly [ADP-ribose] polymerase n=2 Tax=Branchiostoma floridae TaxID=7739 RepID=C3Y5X3_BRAFL) HSP 1 Score: 108 bits (271), Expect = 9.750e-27 Identity = 59/124 (47.58%), Postives = 80/124 (64.52%), Query Frame = 1
Query: 10 ERDLFHGAKSESIPNICTMGFDKRLAGSRNGAMYGKGCYFTQNAGVAA--RYM--DSPNRGQMIMAKVLVGRFTQGRKHMVRPPLIGDSDGHRSFDSTVDNVAQPKTFVTYMDWQAYPMYLITF 369
E++L+HG +E+ I GF++R +G ++G YGKG YF NA +A RY D+ R +M +AKVL G +T GR+HM PP DS G S+DSTVD++ P T+V + D QAYP YLITF
Sbjct: 131 EKELWHGTNAEACREISPNGFNRRYSG-QHGTAYGKGTYFAVNASYSAHDRYSSPDAQGRKKMYLAKVLTGEYTSGRRHMFVPPRRQDSSG-LSYDSTVDDIKTPTTYVVFHDAQAYPQYLITF 252
BLAST of mRNA_F-distichus_contig9836.19274.1 vs. uniprot
Match: C3Y5X2_BRAFL (Poly [ADP-ribose] polymerase n=2 Tax=Branchiostoma floridae TaxID=7739 RepID=C3Y5X2_BRAFL) HSP 1 Score: 109 bits (273), Expect = 2.040e-26 Identity = 59/124 (47.58%), Postives = 81/124 (65.32%), Query Frame = 1
Query: 10 ERDLFHGAKSESIPNICTMGFDKRLAGSRNGAMYGKGCYFTQNAGVAA--RYM--DSPNRGQMIMAKVLVGRFTQGRKHMVRPPLIGDSDGHRSFDSTVDNVAQPKTFVTYMDWQAYPMYLITF 369
E++L+HG +E+ I GF++R +G ++G YGKG YF NA +A RY D+ R +M +AKVL G +T G++HMV PP DS G S+DSTVD++ P T+V + D QAYP YLITF
Sbjct: 206 EKELWHGTNAEACREISPNGFNRRYSG-QHGTAYGKGTYFAVNASYSAHDRYSSPDAQGRKKMYLAKVLTGEYTSGKRHMVVPPRRQDSSG-LSYDSTVDDIKTPTTYVVFHDAQAYPQYLITF 327
BLAST of mRNA_F-distichus_contig9836.19274.1 vs. uniprot
Match: A7T1E8_NEMVE (Poly [ADP-ribose] polymerase n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7T1E8_NEMVE) HSP 1 Score: 97.8 bits (242), Expect = 9.540e-24 Identity = 52/124 (41.94%), Postives = 68/124 (54.84%), Query Frame = 1
Query: 1 IQNERDLFHGAKSESIPNICTMGFDKRLAGSRNGAMYGKGCYFTQNAGVAARYMDSPNRGQ-MIMAKVLVGRFTQGRKHMVRPPLIGDSDGHRSFDSTVDNVAQPKTFVTYMDWQAYPMYLITF 369
I NE+ LFHG ++ +I T GF++ AG G YG G YF NA + Y G+ M +AKVLVG++TQGR+ ++ PP I S +DS D FV + D Q YP YLITF
Sbjct: 8 INNEKSLFHGTDGSNVTHINTQGFNRSFAGKARGTAYGNGVYFAANASYSEGYSPQSGNGRHMYVAKVLVGKYTQGRQGLLNPPCINASRPEILYDSVDDGGG--SIFVIFHDSQCYPEYLITF 129
BLAST of mRNA_F-distichus_contig9836.19274.1 vs. uniprot
Match: A0A852DE22_PASAF (Poly [ADP-ribose] polymerase (Fragment) n=1 Tax=Passerina amoena TaxID=142471 RepID=A0A852DE22_PASAF) HSP 1 Score: 99.0 bits (245), Expect = 1.390e-23 Identity = 52/122 (42.62%), Postives = 70/122 (57.38%), Query Frame = 1
Query: 7 NERDLFHGAKSESIPNICTMGFDKRLAGSRNGAMYGKGCYFTQNAGVAARYMDSP-NRGQMIMAKVLVGRFTQGRKHMVRPPLIGDSDGHRSFDSTVDNVAQPKTFVTYMDWQAYPMYLITF 369
+ER LFHG + I IC FD R+ G +G +YGKGCYF ++A + Y + N M +A+VLVG FT G H VRPP+ D + +DS V+N + P FV + Q YP YLI +
Sbjct: 60 DERFLFHGTSKKDIDAICQQNFDWRICGL-HGTVYGKGCYFARDASYSDNYCGADSNTKTMFLARVLVGEFTLGSSHYVRPPM---KDNQKFYDSCVNNSSNPSIFVIFEKQQIYPEYLIEY 177
BLAST of mRNA_F-distichus_contig9836.19274.1 vs. uniprot
Match: A0A8C4NAB3_EPTBU (Poly [ADP-ribose] polymerase n=1 Tax=Eptatretus burgeri TaxID=7764 RepID=A0A8C4NAB3_EPTBU) HSP 1 Score: 99.0 bits (245), Expect = 7.140e-23 Identity = 54/121 (44.63%), Postives = 77/121 (63.64%), Query Frame = 1
Query: 10 ERDLFHGAKSESIPNICTMGFDKRLAGSRNGAMYGKGCYFTQNAGVAARYM-DSPNRGQMIMAKVLVGRFTQGRKHMVRPPLIGDSDGHRSFDSTVDNVAQPKTFVTYMDWQAYPMYLITF 369
ER LFHG S SI IC M FD RL G ++GA+YGKG YF +NA + RY+ ++ QMI+A+VLVG + QG++ RPP + + +DS VD+++ P+ FV + Q YP YL+ +
Sbjct: 139 ERLLFHGTSSSSITGICNMNFDMRLHG-KHGALYGKGVYFAKNATYSDRYVTEAQFSKQMILARVLVGEYMQGKETYRRPP---EKAPNILYDSCVDDISNPEIFVIFEKDQMYPEYLLEY 255
BLAST of mRNA_F-distichus_contig9836.19274.1 vs. uniprot
Match: UPI0009B36880 (poly [ADP-ribose] polymerase 11-like n=1 Tax=Monopterus albus TaxID=43700 RepID=UPI0009B36880) HSP 1 Score: 97.1 bits (240), Expect = 1.760e-22 Identity = 55/124 (44.35%), Postives = 72/124 (58.06%), Query Frame = 1
Query: 10 ERDLFHGAKSESIPNICTMGFDKRLAGSRNGAMYGKGCYFTQNAGVAARYMD-SPN---RGQMIMAKVLVGRFTQGRKHMVRPPLIGDSDGHRSFDSTVDNVAQPKTFVTYMDWQAYPMYLITF 369
ER LFHG +S +I IC FD RL G R+G YGKG YF + A AA+Y SP G+++MA+VL+GR T G K ++P H DS VDN+A P+ +V + Q YP YLI +
Sbjct: 97 ERRLFHGTESGNIDGICKYNFDMRLVGRRHGHAYGKGIYFAKFASQAAKYSKRSPGDCGHGELLMARVLIGRPTLGAKEKLKPDHGALETTH---DSCVDNIANPRVYVIFDSNQIYPEYLIEY 217
BLAST of mRNA_F-distichus_contig9836.19274.1 vs. uniprot
Match: A0A8C5E4S0_9TELE (Poly [ADP-ribose] polymerase n=1 Tax=Gouania willdenowi TaxID=441366 RepID=A0A8C5E4S0_9TELE) HSP 1 Score: 96.7 bits (239), Expect = 1.940e-22 Identity = 53/130 (40.77%), Postives = 74/130 (56.92%), Query Frame = 1
Query: 10 ERDLFHGAKSESIPNICTMGFDKRLAGSRNGAMYGKGCYFTQNAGVAARY-----MDSPNRG----QMIMAKVLVGRFTQGRKHMVRPPLIGDSDGHRSFDSTVDNVAQPKTFVTYMDWQAYPMYLITFG 372
ER LFHG +E++ +IC FD RLAG +NG YGKG YF +NA A RY + + G M +A+V+VG+FT G +H ++P D + S+VDN+ P FV + +Q YP YLI +
Sbjct: 86 ERRLFHGTSTENMDSICKYNFDLRLAG-KNGHKYGKGIYFAKNASYADRYSRVGMLPGTSWGFSTKVMFLARVIVGKFTLGHRHFIKP------DDGNDYQSSVDNMTDPHIFVIFDSYQIYPEYLIEYS 208
BLAST of mRNA_F-distichus_contig9836.19274.1 vs. uniprot
Match: A0A3Q3JK05_MONAL (Poly [ADP-ribose] polymerase n=1 Tax=Monopterus albus TaxID=43700 RepID=A0A3Q3JK05_MONAL) HSP 1 Score: 97.1 bits (240), Expect = 6.240e-22 Identity = 55/124 (44.35%), Postives = 72/124 (58.06%), Query Frame = 1
Query: 10 ERDLFHGAKSESIPNICTMGFDKRLAGSRNGAMYGKGCYFTQNAGVAARYMD-SPN---RGQMIMAKVLVGRFTQGRKHMVRPPLIGDSDGHRSFDSTVDNVAQPKTFVTYMDWQAYPMYLITF 369
ER LFHG +S +I IC FD RL G R+G YGKG YF + A AA+Y SP G+++MA+VL+GR T G K ++P H DS VDN+A P+ +V + Q YP YLI +
Sbjct: 162 ERRLFHGTESGNIDGICKYNFDMRLVGRRHGHAYGKGIYFAKFASQAAKYSKRSPGDCGHGELLMARVLIGRPTLGAKEKLKPDHGALETTH---DSCVDNIANPRVYVIFDSNQIYPEYLIEY 282
BLAST of mRNA_F-distichus_contig9836.19274.1 vs. uniprot
Match: A0A7D9HUU5_PARCT (Poly [ADP-ribose] polymerase n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HUU5_PARCT) HSP 1 Score: 99.0 bits (245), Expect = 1.340e-21 Identity = 54/121 (44.63%), Postives = 70/121 (57.85%), Query Frame = 1
Query: 19 LFHGAKSESIPNICTMGFDKRLAGSRNGAMYGKGCYFTQNAGVAARYMDSPNRGQ----MIMAKVLVGRFTQGRKHMVRPPLIGDSDGHRSFDSTVDNVAQPKTFVTYMDWQAYPMYLITF 369
LFHG E+I I GFD+ AG +NG YG+G YF ++A + SP Q M AKVLVG +TQG +M+ P +D + +FDS VDN+A PK FV + D+ Y YLITF
Sbjct: 1463 LFHGTSRENIEKINAGGFDRSFAG-KNGKAYGRGVYFARDANYSCNTTFSPPDSQGLRYMYYAKVLVGEYTQGNPNMLVAPNKRSADPNETFDSVVDNIANPKIFVIFKDYVCYTEYLITF 1582 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig9836.19274.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig9836.19274.1 >prot_F-distichus_contig9836.19274.1 ID=prot_F-distichus_contig9836.19274.1|Name=mRNA_F-distichus_contig9836.19274.1|organism=Fucus distichus monoicous|type=polypeptide|length=125bp IQNERDLFHGAKSESIPNICTMGFDKRLAGSRNGAMYGKGCYFTQNAGVAback to top mRNA from alignment at F-distichus_contig9836:241..2041+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig9836.19274.1 ID=mRNA_F-distichus_contig9836.19274.1|Name=mRNA_F-distichus_contig9836.19274.1|organism=Fucus distichus monoicous|type=mRNA|length=1801bp|location=Sequence derived from alignment at F-distichus_contig9836:241..2041+ (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig9836:241..2041+ >mRNA_F-distichus_contig9836.19274.1 ID=mRNA_F-distichus_contig9836.19274.1|Name=mRNA_F-distichus_contig9836.19274.1|organism=Fucus distichus monoicous|type=CDS|length=750bp|location=Sequence derived from alignment at F-distichus_contig9836:241..2041+ (Fucus distichus monoicous)back to top |