prot_F-distichus_contig96362.19091.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig96362.19091.1
Unique Nameprot_F-distichus_contig96362.19091.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length103
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig96362.19091.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.1370.110coord: 38..102
e-value: 2.1E-8
score: 36.2
IPR002625Smr domainPFAMPF01713Smrcoord: 46..101
e-value: 1.1E-7
score: 32.1
IPR036063Smr domain superfamilySUPERFAMILY160443SMR domain-likecoord: 48..99

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.1370.110coord: 38..102
e-value: 2.1E-8
score: 36.2
IPR002625Smr domainPFAMPF01713Smrcoord: 46..101
e-value: 1.1E-7
score: 32.1
IPR036063Smr domain superfamilySUPERFAMILY160443SMR domain-likecoord: 48..99

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig96362contigF-distichus_contig96362:173..481 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig96362.19091.1mRNA_F-distichus_contig96362.19091.1Fucus distichus monoicousmRNAF-distichus_contig96362 11..723 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig96362.19091.1 ID=prot_F-distichus_contig96362.19091.1|Name=mRNA_F-distichus_contig96362.19091.1|organism=Fucus distichus monoicous|type=polypeptide|length=103bp
MPQPQAAAAAPTTVDDTDATYSSAAARGTDPRGEGKAGASSTPTYACKAF
SQLEVVVGRGSHSKTGVGRLKPVVLKYVTDRGFREEAVRGEQGGGVVSIS
LS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002625Smr_dom
IPR036063Smr_dom_sf