prot_F-distichus_contig102144.182.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-distichus_contig102144.182.1
Unique Name	prot_F-distichus_contig102144.182.1
Type	polypeptide
Organism	Fucus distichus monoicous (Fucus distichus monoicous)
Sequence length	140

Homology

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BLAST of mRNA_F-distichus_contig102144.182.1 vs. uniprot
Match: A0A6H5L4U4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4U4_9PHAE)

HSP 1 Score: 189 bits (479), Expect = 6.260e-56
Identity = 86/140 (61.43%), Postives = 105/140 (75.00%), Query Frame = 0

Query:    1 QIVILPDTSGLLEGALLIGIALGVVGHFFAGVPSRSLAFVRSRGLWFVVSMACYLTGVGGMIFCIIRNPKAHGYNHTGGAAMFSPGGRDQFWYEGAVVALLYVGMSSAILGIYAGVGWKRAPSMARGVVVMACVTRPCYL 140
            ++VI+ D+SGLL  ALL+G+ LGV  HF A VPSR +  VR +GLWF VSM CY+TGVGGMI+CIIRNPK HGY+  G  AM SPGGRDQFWYEG VV++LY+ MS+AILG+Y    WKR P   R   V+AC+T  CY+
Sbjct:  190 RVVIVADSSGLLPAALLLGVILGVAAHFLAAVPSRVMTTVRHKGLWFAVSMGCYMTGVGGMIYCIIRNPKTHGYHQDGATAMMSPGGRDQFWYEGMVVSVLYLFMSAAILGVYYAASWKRVPYPLRTAAVLACITVLCYV 329

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BLAST of mRNA_F-distichus_contig102144.182.1 vs. uniprot
Match: D8LGN1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGN1_ECTSI)

HSP 1 Score: 185 bits (470), Expect = 5.410e-55
Identity = 86/139 (61.87%), Postives = 103/139 (74.10%), Query Frame = 0

Query:    2 IVILPDTSGLLEGALLIGIALGVVGHFFAGVPSRSLAFVRSRGLWFVVSMACYLTGVGGMIFCIIRNPKAHGYNHTGGAAMFSPGGRDQFWYEGAVVALLYVGMSSAILGIYAGVGWKRAPSMARGVVVMACVTRPCYL 140
            +VI+ D+SGLL  ALL+G  LGV  HF A VPSR +  VR +GLWF VS+ CY+TGVGGMI+CIIRNPK HGY+  G  AM S GGRDQFWYEG VVA+LY+ MS+AILG+Y    WKR PS  R   V+AC+T  CY+
Sbjct:  152 VVIVADSSGLLPAALLLGAILGVAAHFLADVPSRVMTTVRHKGLWFTVSLGCYMTGVGGMIYCIIRNPKTHGYHQDGATAMMSAGGRDQFWYEGMVVAVLYLFMSAAILGVYYAASWKRVPSPLRTAAVLACITVLCYV 290

[Close]

BLAST of mRNA_F-distichus_contig102144.182.1 vs. uniprot
Match: A0A836CKN7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKN7_9STRA)

HSP 1 Score: 114 bits (284), Expect = 1.300e-27
Identity = 59/140 (42.14%), Postives = 82/140 (58.57%), Query Frame = 0

Query:    1 QIVILPDTSGLLEGALLIGIALGVVGHFFAGVPSRSLAFVRSRGLWFVVSMACYLTGVGGMIFCIIRNPKAHGYNHTG------GAAMFSPGGRDQFWYEGAVVALLYVGMSSAILGIYAGVGWKRAPSMARGVVVMACV 134
             +V+L D + L     L    + V+ HF    P+R LA VRS+ LW +VS+A Y  GVGG+I+CIIRNP+ +G   TG         +FS   RDQ+W+EG VVA LY+ M+ A  GI + V W+RA  + R + V  C+
Sbjct:  122 SLVVLRDMTYLQLAVCLAAALVAVLAHFVVLEPTRMLALVRSKALWLMVSLATYTVGVGGLIYCIIRNPQEYGTKPTGINSTGHKVVLFSTNARDQWWWEGIVVAFLYLLMAGATWGITSAVQWRRAHPLLRNLAVCCCI 261

The following BLAST results are available for this feature:

BLAST of mRNA_F-distichus_contig102144.182.1 vs. uniprot

BLAST of mRNA_F-distichus_contig102144.182.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A6H5L4U4_9PHAE	6.260e-56	61.43	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LGN1_ECTSI	5.410e-55	61.87	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A836CKN7_9STRA	1.300e-27	42.14	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021149	Oligosaccharyl transferase complex, subunit OST3/OST6	PFAM	PF04756	OST3_OST6	coord: 18..134 e-value: 6.0E-16 score: 58.6
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 91..116
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 117..140
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 14..32
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 67..90
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 33..43
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..13
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 44..66
None	No IPR available	TMHMM	TMhelix		coord: 10..32
None	No IPR available	TMHMM	TMhelix		coord: 44..66
None	No IPR available	TMHMM	TMhelix		coord: 95..117

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021149	Oligosaccharyl transferase complex, subunit OST3/OST6	PFAM	PF04756	OST3_OST6	coord: 18..134 e-value: 6.0E-16 score: 58.6
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 91..116
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 117..140
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 14..32
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 67..90
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 33..43
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..13
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 44..66
None	No IPR available	TMHMM	TMhelix		coord: 10..32
None	No IPR available	TMHMM	TMhelix		coord: 44..66
None	No IPR available	TMHMM	TMhelix		coord: 95..117

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-distichus_contig102144	contig	F-distichus_contig102144:26..966 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Fucus distichus monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-distichus_contig102144.182.1	mRNA_F-distichus_contig102144.182.1	Fucus distichus monoicous	mRNA	F-distichus_contig102144 26..966 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-distichus_contig102144.182.1 ID=prot_F-distichus_contig102144.182.1|Name=mRNA_F-distichus_contig102144.182.1|organism=Fucus distichus monoicous|type=polypeptide|length=140bp
QIVILPDTSGLLEGALLIGIALGVVGHFFAGVPSRSLAFVRSRGLWFVVS
MACYLTGVGGMIFCIIRNPKAHGYNHTGGAAMFSPGGRDQFWYEGAVVAL
LYVGMSSAILGIYAGVGWKRAPSMARGVVVMACVTRPCYL

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR021149	OligosaccharylTrfase_OST3/OST6