prot_F-distichus_contig100846.68.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig100846.68.1
Unique Nameprot_F-distichus_contig100846.68.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length55
Homology
BLAST of mRNA_F-distichus_contig100846.68.1 vs. uniprot
Match: D8LGP5_ECTSI (Farnesyl pyrophosphate synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGP5_ECTSI)

HSP 1 Score: 93.6 bits (231), Expect = 5.240e-21
Identity = 38/52 (73.08%), Postives = 44/52 (84.62%), Query Frame = 0
Query:    2 QVCRGSVLGWAVEWLQAFFLVADDVMDKSLTRRGQPCWYKVCRLYFVVFNSG 53
            +VCRGS+LGW VEWLQAFFLVADDVMD+SLTRRGQPCWYKV ++  +  N  
Sbjct:  227 EVCRGSILGWCVEWLQAFFLVADDVMDRSLTRRGQPCWYKVPKVQEIAINDS 278          
BLAST of mRNA_F-distichus_contig100846.68.1 vs. uniprot
Match: A0A6H5L554_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L554_9PHAE)

HSP 1 Score: 91.3 bits (225), Expect = 3.630e-20
Identity = 38/43 (88.37%), Postives = 41/43 (95.35%), Query Frame = 0
Query:    2 QVCRGSVLGWAVEWLQAFFLVADDVMDKSLTRRGQPCWYKVCR 44
            +VCRGS+LGW VEWLQAFFLVADDVMD+SLTRRGQPCWYKV R
Sbjct:  237 EVCRGSILGWCVEWLQAFFLVADDVMDRSLTRRGQPCWYKVGR 279          
BLAST of mRNA_F-distichus_contig100846.68.1 vs. uniprot
Match: Q20CB4_VITVI (Farnesyl diphosphate synthase (Fragment) n=1 Tax=Vitis vinifera TaxID=29760 RepID=Q20CB4_VITVI)

HSP 1 Score: 80.1 bits (196), Expect = 1.730e-17
Identity = 30/53 (56.60%), Postives = 40/53 (75.47%), Query Frame = 0
Query:    2 QVCRGSVLGWAVEWLQAFFLVADDVMDKSLTRRGQPCWYKVCRLYFVVFNSGI 54
            +VC   VLGW +EWLQA+FLV DD+MD S TRRGQPCW++V ++  +  N G+
Sbjct:    7 EVCLACVLGWCIEWLQAYFLVLDDIMDNSHTRRGQPCWFRVPKVGMIAANDGV 59          
BLAST of mRNA_F-distichus_contig100846.68.1 vs. uniprot
Match: A0A7R9VDU2_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9VDU2_9CHLO)

HSP 1 Score: 82.4 bits (202), Expect = 2.860e-17
Identity = 32/52 (61.54%), Postives = 41/52 (78.85%), Query Frame = 0
Query:    3 VCRGSVLGWAVEWLQAFFLVADDVMDKSLTRRGQPCWYKVCRLYFVVFNSGI 54
            + + +VLGW +EWLQAFFLVADD+MD S+TRRGQPCWYK  ++  +  N GI
Sbjct:   80 IFKANVLGWCIEWLQAFFLVADDIMDGSITRRGQPCWYKQSKVGLLAVNDGI 131          
BLAST of mRNA_F-distichus_contig100846.68.1 vs. uniprot
Match: A0A7S3F4E0_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma singulare TaxID=676789 RepID=A0A7S3F4E0_9VIRI)

HSP 1 Score: 82.4 bits (202), Expect = 3.010e-17
Identity = 35/54 (64.81%), Postives = 41/54 (75.93%), Query Frame = 0
Query:    1 SQVCRGSVLGWAVEWLQAFFLVADDVMDKSLTRRGQPCWYKVCRLYFVVFNSGI 54
            SQ+ R  VLGW +EWLQAFFLVADD+MD S+TRRGQPCWYKV ++     N  I
Sbjct:   81 SQLRRACVLGWCIEWLQAFFLVADDIMDASITRRGQPCWYKVPKVELKACNDCI 134          
BLAST of mRNA_F-distichus_contig100846.68.1 vs. uniprot
Match: A0A022R2J6_ERYGU (Uncharacterized protein n=1 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022R2J6_ERYGU)

HSP 1 Score: 79.0 bits (193), Expect = 4.860e-17
Identity = 31/53 (58.49%), Postives = 39/53 (73.58%), Query Frame = 0
Query:    2 QVCRGSVLGWAVEWLQAFFLVADDVMDKSLTRRGQPCWYKVCRLYFVVFNSGI 54
            +V   S LGW +EWLQA+FLV DD+MD S TRRGQPCWY+V ++  +  N GI
Sbjct:   78 EVFLASALGWCIEWLQAYFLVLDDIMDNSQTRRGQPCWYRVPKVGMIAVNDGI 130          
BLAST of mRNA_F-distichus_contig100846.68.1 vs. uniprot
Match: A0A8B6GS04_MYTGA (Farnesyl diphosphate synthase n=1 Tax=Mytilus galloprovincialis TaxID=29158 RepID=A0A8B6GS04_MYTGA)

HSP 1 Score: 80.5 bits (197), Expect = 7.010e-17
Identity = 31/48 (64.58%), Postives = 38/48 (79.17%), Query Frame = 0
Query:    8 VLGWAVEWLQAFFLVADDVMDKSLTRRGQPCWYKVCRLYFVVFNSGIY 55
            +LGW +EWLQAFFLVADD+MDKS+TRRG+PCWYK   +  +  N  IY
Sbjct:   70 ILGWCIEWLQAFFLVADDIMDKSITRRGKPCWYKQNNVGLIAVNDAIY 117          
BLAST of mRNA_F-distichus_contig100846.68.1 vs. uniprot
Match: UPI0008787487 (farnesyl pyrophosphate synthase-like n=1 Tax=Nicotiana tomentosiformis TaxID=4098 RepID=UPI0008787487)

HSP 1 Score: 79.3 bits (194), Expect = 7.090e-17
Identity = 30/53 (56.60%), Postives = 40/53 (75.47%), Query Frame = 0
Query:    2 QVCRGSVLGWAVEWLQAFFLVADDVMDKSLTRRGQPCWYKVCRLYFVVFNSGI 54
            ++ + S LGW +EWLQA+FLV DD+MD S TRRGQPCWYK+ ++  +  N GI
Sbjct:   34 EIFQASALGWCIEWLQAYFLVLDDIMDNSHTRRGQPCWYKLPKVGMIAVNDGI 86          
BLAST of mRNA_F-distichus_contig100846.68.1 vs. uniprot
Match: A0A835Z5G4_9STRA (Farnesyl pyrophosphate synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5G4_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 9.190e-17
Identity = 33/50 (66.00%), Postives = 38/50 (76.00%), Query Frame = 0
Query:    4 CRGSVLGWAVEWLQAFFLVADDVMDKSLTRRGQPCWYKVCRLYFVVFNSG 53
            CR +VLGW +EWLQAFFLVADDVMD S TRRGQPCWY+V  +  +  N  
Sbjct:  235 CRAAVLGWCIEWLQAFFLVADDVMDDSHTRRGQPCWYRVPHVKQIAINDA 284          
BLAST of mRNA_F-distichus_contig100846.68.1 vs. uniprot
Match: UPI00145878CE (farnesyl pyrophosphate synthase-like n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI00145878CE)

HSP 1 Score: 80.9 bits (198), Expect = 1.160e-16
Identity = 33/55 (60.00%), Postives = 41/55 (74.55%), Query Frame = 0
Query:    1 SQVCRGSVLGWAVEWLQAFFLVADDVMDKSLTRRGQPCWYKVCRLYFVVFNSGIY 55
            S++ +  +LGW +EWLQAFFLVADDVMDKS+TRRG+PCWYK   +  V  N   Y
Sbjct:   91 SELRQARILGWCIEWLQAFFLVADDVMDKSITRRGKPCWYKKKDVGLVAVNDAFY 145          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig100846.68.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LGP5_ECTSI5.240e-2173.08Farnesyl pyrophosphate synthase n=1 Tax=Ectocarpus... [more]
A0A6H5L554_9PHAE3.630e-2088.37Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
Q20CB4_VITVI1.730e-1756.60Farnesyl diphosphate synthase (Fragment) n=1 Tax=V... [more]
A0A7R9VDU2_9CHLO2.860e-1761.54Hypothetical protein n=1 Tax=Chlamydomonas euryale... [more]
A0A7S3F4E0_9VIRI3.010e-1764.81Hypothetical protein n=1 Tax=Prasinoderma singular... [more]
A0A022R2J6_ERYGU4.860e-1758.49Uncharacterized protein n=1 Tax=Erythranthe guttat... [more]
A0A8B6GS04_MYTGA7.010e-1764.58Farnesyl diphosphate synthase n=1 Tax=Mytilus gall... [more]
UPI00087874877.090e-1756.60farnesyl pyrophosphate synthase-like n=1 Tax=Nicot... [more]
A0A835Z5G4_9STRA9.190e-1766.00Farnesyl pyrophosphate synthase n=1 Tax=Tribonema ... [more]
UPI00145878CE1.160e-1660.00farnesyl pyrophosphate synthase-like n=1 Tax=Pecte... [more]

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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008949Isoprenoid synthase domain superfamilyGENE3D1.10.600.10coord: 2..54
e-value: 1.7E-15
score: 58.6
IPR008949Isoprenoid synthase domain superfamilySUPERFAMILY48576Terpenoid synthasescoord: 8..44
IPR000092Polyprenyl synthetasePFAMPF00348polyprenyl_syntcoord: 7..42
e-value: 4.6E-17
score: 61.9
IPR039702Farnesyl pyrophosphate synthasePANTHERPTHR11525FARNESYL-PYROPHOSPHATE SYNTHETASEcoord: 4..46
IPR033749Polyprenyl synthetase, conserved sitePROSITEPS00723POLYPRENYL_SYNTHASE_1coord: 21..35
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.515

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008949Isoprenoid synthase domain superfamilyGENE3D1.10.600.10coord: 2..54
e-value: 1.7E-15
score: 58.6
IPR008949Isoprenoid synthase domain superfamilySUPERFAMILY48576Terpenoid synthasescoord: 8..44
IPR000092Polyprenyl synthetasePFAMPF00348polyprenyl_syntcoord: 7..42
e-value: 4.6E-17
score: 61.9
IPR039702Farnesyl pyrophosphate synthasePANTHERPTHR11525FARNESYL-PYROPHOSPHATE SYNTHETASEcoord: 4..46
IPR033749Polyprenyl synthetase, conserved sitePROSITEPS00723POLYPRENYL_SYNTHASE_1coord: 21..35
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..18
score: 0.515

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig100846contigF-distichus_contig100846:1710..1874 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig100846.68.1mRNA_F-distichus_contig100846.68.1Fucus distichus monoicousmRNAF-distichus_contig100846 1710..1874 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig100846.68.1 ID=prot_F-distichus_contig100846.68.1|Name=mRNA_F-distichus_contig100846.68.1|organism=Fucus distichus monoicous|type=polypeptide|length=55bp
SQVCRGSVLGWAVEWLQAFFLVADDVMDKSLTRRGQPCWYKVCRLYFVVF
NSGIY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008949Isoprenoid_synthase_dom_sf
IPR000092Polyprenyl_synt
IPR039702FPS1
IPR033749Polyprenyl_synt_CS