mRNA_F-distichus_contig106585.559.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig106585.559.1 vs. uniprot
Match: D8LN66_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN66_ECTSI) HSP 1 Score: 258 bits (660), Expect = 7.830e-80 Identity = 157/276 (56.88%), Postives = 186/276 (67.39%), Query Frame = 1
Query: 16 SIKINFQGEAHDVTLNTRPPPTLAGLQAAVSSTFCADLPARSRGGAA--DEDLRFTYKDSEGDDIVFDKDAELSLALRLSPESLEISAARKVESKTKPHDPD-RIYKVAARNLREYHGVPSMTPDKLTSTLDLLKLCPRRLTKQGLAPKKLLREMM-------KDKRVPLADNETDEDLAETVCADMELMAVEDDTKRFNDDFVE-GVADKSSSEEEIGEGATDEQPQCRVKMPIHMTFIAAGIKLHPREVRPLLVALGVHPRHFVKLGLIDAKDL 810
SIKINFQG + DV N P TLA LQA +++ F A+LP RS GG A D DL FTYKD +GDDIVFDKD+EL LA+RL P SLEISAA K + + D + R+YK+AARNLREY+GVPSMTP KL TL LKL P+RL KQGLAPK LL M K +VPL D + +EDLAE+V A MELM++EDD K +ND FV AD SS + + E P+ + + IH FIA GI+L PREVRPLLVAL V P KLGL+D KDL
Sbjct: 21 SIKINFQGASRDV--NVPAPVTLASLQAVIAAAFDAELPVRSPGGEAAKDTDLSFTYKDPDGDDIVFDKDSELKLAMRLCPGSLEISAAGKEKKAAEMPDSEARLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKNLLPRMKAEAANNAKVSKVPLGDGKNNEDLAESVAAGMELMSLEDDKKEWNDGFVSVEPADTSSPDNDNEEKNDAVAPEVKKNL-IHKAFIAGGIQLRPREVRPLLVALDVRPCRLAKLGLVDGKDL 293
BLAST of mRNA_F-distichus_contig106585.559.1 vs. uniprot
Match: A0A6H5KAY7_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAY7_9PHAE) HSP 1 Score: 254 bits (648), Expect = 5.500e-78 Identity = 156/276 (56.52%), Postives = 184/276 (66.67%), Query Frame = 1
Query: 16 SIKINFQGEAHDVTLNTRPPPTLAGLQAAVSSTFCADLPARSRGGAA--DEDLRFTYKDSEGDDIVFDKDAELSLALRLSPESLEISAARKVESKTK-PHDPDRIYKVAARNLREYHGVPSMTPDKLTSTLDLLKLCPRRLTKQGLAPKKLLREMMKD-------KRVPLADNETDEDLAETVCADMELMAVEDDTKRFNDDFVE-GVADKSSSEEEIGEGATDEQPQCRVKMPIHMTFIAAGIKLHPREVRPLLVALGVHPRHFVKLGLIDAKDL 810
SIKINFQG + DV++ P TLA LQAA+++ F +LP RS G A D DL FTYKD +GDDIVFDKD+EL+LALRL P SLEISAA K TK P + +YK+AARNLREY+GVPSMTP KL TL LKL P+RL KQGLAPK LL M + +V L D + +EDLAE V A ME M+VEDD K +ND FV A+ SSS+ E D P+ + + IH FIA GI+L PREVRPLLVAL V P KLGL+D KDL
Sbjct: 32 SIKINFQGASRDVSVPA--PATLARLQAAIAAVFEVELPVRSLTGEAAKDTDLSFTYKDPDGDDIVFDKDSELNLALRLCPGSLEISAAGKENKATKMPDSEETLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKMLLARMKAETANNAKLSKVRLGDGKNNEDLAEWVAAGMEFMSVEDDKKEWNDGFVSVEPAETSSSDNGNEEENDDAAPEVKQNL-IHKAFIAGGIQLRPREVRPLLVALDVRPWRLAKLGLVDGKDL 304
BLAST of mRNA_F-distichus_contig106585.559.1 vs. uniprot
Match: D8LN68_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN68_ECTSI) HSP 1 Score: 254 bits (649), Expect = 1.900e-77 Identity = 157/276 (56.88%), Postives = 184/276 (66.67%), Query Frame = 1
Query: 16 SIKINFQGEAHDVTLNTRPPPTLAGLQAAVSSTFCADLPARSRGGAA--DEDLRFTYKDSEGDDIVFDKDAELSLALRLSPESLEISAARKVESKTKPHDPD-RIYKVAARNLREYHGVPSMTPDKLTSTLDLLKLCPRRLTKQGLAPKKLLREMM-------KDKRVPLADNETDEDLAETVCADMELMAVEDDTKRFNDDFVE-GVADKSSSEEEIGEGATDEQPQCRVKMPIHMTFIAAGIKLHPREVRPLLVALGVHPRHFVKLGLIDAKDL 810
SIKINFQG + DV N P TLA LQAA++ F A+LP RS G A D DL FTYKD +GDDIVFDKD+EL+LA+RL P SLEISAA K DP+ R+YK+AARNLREY+GVPSMTP KL TL L+L P+RL KQGLAPK LL M K +VPL D + +EDLAE+V A MELM+VEDD K +ND FV AD SS + E P+ + + IH FIA GI+L PREVRPLLVAL V P KLGL++ KDL
Sbjct: 5 SIKINFQGTSRDV--NVPVPVTLASLQAAIAGAFDAELPVRSPAGEAAKDTDLSFTYKDPDGDDIVFDKDSELNLAVRLCPGSLEISAAGKENKPANKPDPEARLYKIAARNLREYNGVPSMTPLKLVKTLAFLELNPQRLVKQGLAPKVLLARMKAEAANNAKVSKVPLGDGKNNEDLAESVAAGMELMSVEDDKKEWNDGFVSVEPADTSSPGNDNEEKNDAVAPEVKKNL-IHKAFIAGGIQLRPREVRPLLVALDVRPCRLAKLGLVNGKDL 277
BLAST of mRNA_F-distichus_contig106585.559.1 vs. uniprot
Match: A0A6H5JPU3_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPU3_9PHAE) HSP 1 Score: 252 bits (644), Expect = 2.310e-77 Identity = 153/275 (55.64%), Postives = 180/275 (65.45%), Query Frame = 1
Query: 16 SIKINFQGEAHDVTLNTRPPPTLAGLQAAVSSTFCADLPARSRGGAA--DEDLRFTYKDSEGDDIVFDKDAELSLALRLSPESLEISAARKVESKTK-PHDPDRIYKVAARNLREYHGVPSMTPDKLTSTLDLLKLCPRRLTKQGLAPKKLLREMM-------KDKRVPLADNETDEDLAETVCADMELMAVEDDTKRFNDDFVEGVADKSSSEEEIGEGATDEQPQCRVKMPIHMTFIAAGIKLHPREVRPLLVALGVHPRHFVKLGLIDAKDL 810
SIKI FQG + DV N R P LA LQAA+++ F +LPARS G A D DL FTYKD +GDDIVFDK++EL LALRL P SLEISAA K T+ P +++YK+AARNLREY+GVPSMTP KL TL LKL P+RL KQGLAPK LL M K +VPL D + +EDLAE+V A MELM+VED K +ND FV + S E D P+ + + IH FIA GI+L PREVRPLLVAL V P KLGL+ KDL
Sbjct: 23 SIKITFQGASRDV--NVRVPVMLASLQAAIAAAFDVELPARSSAGEAANDTDLSFTYKDPDGDDIVFDKESELQLALRLCPGSLEISAAGKENKATRMPDSEEKLYKIAARNLREYNGVPSMTPPKLVKTLAFLKLNPQRLVKQGLAPKVLLARMKAEAANNAKVSKVPLGDGKNNEDLAESVAAGMELMSVEDGKKEWNDGFVSVEPAEISFPANDNEEKNDAAPEAKKNL-IHKAFIAGGIQLRPREVRPLLVALDVLPYRLAKLGLVGGKDL 294
BLAST of mRNA_F-distichus_contig106585.559.1 vs. uniprot
Match: A0A6H5JQ17_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ17_9PHAE) HSP 1 Score: 254 bits (649), Expect = 2.650e-77 Identity = 155/286 (54.20%), Postives = 185/286 (64.69%), Query Frame = 1
Query: 16 SIKINFQGEAHDVTLNTRPPPTLAGLQAAVSSTFCADLPARSRGGAA--DEDLRFTYKDSEGDDIVFDKDAELSLALRLSPESLEISAARKVESKTKPHDPD-RIYKVAARNLREYHGVPSMTPDKLTSTLDLLKLCPRRLTKQGLAPKKLLREMM-------KDKRVPLADNETDEDLAETVCADMELMAVEDDTKRFNDDFVEGVADKSSS-----------EEEIGEGATDEQPQCRVKMPIHMTFIAAGIKLHPREVRPLLVALGVHPRHFVKLGLIDAKDL 810
SIKINFQG + DV N P +LA LQAA+++ F A+LP RS G A D DL FTYKD +GDDIVFDKD+EL LA+RL P SLEISA K K DP+ R+YK+AARNLREY+GVPSMT KL TL LKL P+RL KQGLAPK LL M K +VPL D + +EDLAE+V A MELM+VEDD K +ND FV +D S++ + + E D P+ + + IH FI GI+L PREVRPLLVAL V P KLGL+D KDL
Sbjct: 23 SIKINFQGASRDV--NVPAPVSLASLQAAIAAAFDAELPVRSPAGEAAKDTDLSFTYKDPDGDDIVFDKDSELKLAVRLCPSSLEISATLKESEPAKKPDPEARLYKIAARNLREYNGVPSMTAPKLIKTLAFLKLNPQRLVKQGLAPKVLLARMKAEAANNAKVSKVPLGDGKNNEDLAESVAAGMELMSVEDDKKEWNDGFVSAESDASAAAVPITAKTSTPDNDNEEENNDAAPETKKDL-IHKAFITGGIQLRPREVRPLLVALDVRPCRLAKLGLVDGKDL 305
BLAST of mRNA_F-distichus_contig106585.559.1 vs. uniprot
Match: A0A6H5KB69_9PHAE (PB1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KB69_9PHAE) HSP 1 Score: 250 bits (639), Expect = 1.560e-75 Identity = 156/285 (54.74%), Postives = 183/285 (64.21%), Query Frame = 1
Query: 16 SIKINFQGEAHDVTLNTRPPPTLAGLQAAVSSTFCADLPARSRGGAA--DEDLRFTYKDSEGDDIVFDKDAELSLALRLSPESLEISAARKVESKTKPHDPD-RIYKVAARNLREYHGVPSMTPDKLTSTLDLLKLCPRRLTKQGLAPKKLLREM-------MKDKRVPLADNETDEDLAETVCADMELMAVEDDTKRFNDDFVEGVAD----------KSSSEEEIGEGATDEQPQCRVKMPIHMTFIAAGIKLHPREVRPLLVALGVHPRHFVKLGLIDAKDL 810
SIKINFQG + +V N + P TLA LQA +++ F A+LP RS G A D DL FTYKD +GDDIVFDKD+EL+LA+RL P+SLEISAA K DP+ R+YK+AARNLREY+GVPSMT KL TL LKL PRRL KQGLAPK LL M MK +V L D E +EDLAE+V A MELM+VEDD K N+ FV D K+SS + E D+ K IH FIA GI+L PREVRPLLVAL V P KLGL++ K L
Sbjct: 5 SIKINFQGTSRNV--NVQAPFTLASLQATIAAAFDAELPVRSPAGEATKDTDLSFTYKDPDGDDIVFDKDSELNLAVRLCPDSLEISAAGKENKPDNKPDPEGRLYKIAARNLREYNGVPSMTAPKLIKTLAFLKLNPRRLVKQGLAPKNLLARMKAEAANNMKVSKVTLGDGENNEDLAESVAAGMELMSVEDDKKECNNGFVSAKPDASAAAVPITAKTSSPDNDNEEENDDAAPEVKKNLIHTAFIAGGIQLRPREVRPLLVALDVRPWRLAKLGLVNGKYL 287
BLAST of mRNA_F-distichus_contig106585.559.1 vs. uniprot
Match: D8LN82_ECTSI (PB1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN82_ECTSI) HSP 1 Score: 218 bits (554), Expect = 1.930e-65 Identity = 139/265 (52.45%), Postives = 166/265 (62.64%), Query Frame = 1
Query: 1 MANVRSIKINFQGEAHDVTLNTRPPPTLAGLQAAVSSTFCADLPARSRGGAA--DEDLRFTYKDSEGDDIVFDKDAELSLALRLSPESLEISAARKVESKTKPHDPD-RIYKVAARNLREYHGVPSMTPDKLTSTLDLLKLCPRRLTKQGLAPKKLLREMM-------KDKRVPLADNETDEDLAETVCADMELMAVEDDTKRFNDDFVEG-----------VADKSSSEEEIGEGATDEQPQCRVKMPIHMTFIAAGIKLHPRE 732
M SIKINFQG + DV N P TL LQAA+++ F A+LP RS G A D DL FTYKD +GDDIVFDKD+EL LA+RL P SLEISAA K DP+ R+YK+AARNLREY+GVPSMTP KL TL LKL P+RL KQGLAPK LL M K +VPL D + +EDLA++V A MELM+VED K +ND FV A+ SS + + E D P+ + + IH FIA GI+L PRE
Sbjct: 15 MMTTSSIKINFQGASRDV--NVPAPVTLDSLQAAIAAAFDAELPVRSPAGEAAKDTDLSFTYKDPDGDDIVFDKDSELKLAVRLCPSSLEISAALKESKPANKPDPEARLYKIAARNLREYNGVPSMTPPKLIKTLAFLKLNPQRLVKQGLAPKVLLARMKAEAANNAKVSKVPLGDGKNNEDLADSVAAGMELMSVED-KKEWNDGFVSAESDAPAAAAPITAETSSPDNDKEEENDDAAPEVKKNL-IHKAFIAGGIQLRPRE 275
BLAST of mRNA_F-distichus_contig106585.559.1 vs. uniprot
Match: A0A6H5KVV7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVV7_9PHAE) HSP 1 Score: 110 bits (274), Expect = 2.010e-23 Identity = 76/188 (40.43%), Postives = 96/188 (51.06%), Query Frame = 1
Query: 319 IYKVAARNLREYHGVPSMTPDKLTSTLDLLKLCPRRLTKQGLAPKKLLREMMKDKRVPLADNETDEDLAETVCADMELMAVEDDTKRFNDDFVEGVADKSSSEEEI--GEGATDEQPQCRVKMPIHMTFIAAGIKLHPREVRPLLVALGVHPRHFVKLGLIDAKDLPRPPHHGRGRHGGKPCGPMRRR 876
+YK ARNLREYHGVPSMT D L T+ LL+L P RL QGLAP+KLL K AD D + + E+ + D + +DD +E + + + R K P+H +AAGI L PRE RPLL ALGV P VKLGL+ ++L R R GG+ GP R
Sbjct: 26 LYKATARNLREYHGVPSMTADNLEKTMVLLRLRPGRLVVQGLAPEKLL------KGFSAADAHADT-TDSSGSSGSEVEPEQADDNQVSDDXXXXXXXSGDTEHDNIRKHNSLGFETNKRSKHPVHAALVAAGITLRPRETRPLLRALGVGPHRLVKLGLVQREEL------RRSRPGGRRGGPSHLR 200
BLAST of mRNA_F-distichus_contig106585.559.1 vs. uniprot
Match: A0A6H5JCG1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCG1_9PHAE) HSP 1 Score: 77.4 bits (189), Expect = 3.880e-12 Identity = 58/148 (39.19%), Postives = 77/148 (52.03%), Query Frame = 1
Query: 319 IYKVAARNLREYHGVPSMTPDKLTSTLDLLKLCPRRLTKQGLAPKKLLREMMKDKRVPLADNETDEDLAETVCADMELMAVEDDTKRFNDDFVEGVADKSSSEEEIGEGATDEQP----QCRV-KMPIHMTFIAAGIKLHPREVRPLL 747
++K AARNLREYHGVPS+TP L +T+ LL+L P RL QGLAPK LL+ N T A++ A E+ + N+ F ++ SS + G Q + R K PI F+A G++L PRE RPLL
Sbjct: 41 MFKAAARNLREYHGVPSITPGGLETTMVLLELRPARLVAQGLAPKILLK-----------GNSTAGVDADSTDGSGGFEAEEE---QANNQFSHDLSSNSSDGGDTGNDNIVTQNSIGFEARASKHPIQAVFVAVGVQLRPRETRPLL 174
BLAST of mRNA_F-distichus_contig106585.559.1 vs. uniprot
Match: A0A6H5K3J2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3J2_9PHAE) HSP 1 Score: 76.3 bits (186), Expect = 3.900e-12 Identity = 59/156 (37.82%), Postives = 77/156 (49.36%), Query Frame = 1
Query: 319 IYKVAARNLREYHGVPSMTPDKLTSTLDLLKLCPRRLTKQGLAPKKLLR-----------EMMKDKRVPLADNETDEDLAETVCADMELMAVEDDTKRFNDDFVEGVADKSSSEE--EIGEGATDEQPQCRVKMPIHMTFIAAGIKLHPREVRPLL 747
+YK AARNL EYHGVPSMT L T+ LL+L P RL QGLAPK+LL E D + A+ V DD+ + D + D ++++ +I GA+ K PIH F+AAG++L PRE RPLL
Sbjct: 51 LYKAAARNLCEYHGVPSMTAGGLEKTMVLLQLRPGRLVAQGLAPKQLLEGKSAAGDAXXXXXXXXXXXXXXXXEVDPEQADN-------NQVSDDSNTNSRDGTDIEHDHVATQDSIDIETGAS--------KHPIHAVFVAAGVQLRPRETRPLL 191 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig106585.559.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig106585.559.1 >prot_F-distichus_contig106585.559.1 ID=prot_F-distichus_contig106585.559.1|Name=mRNA_F-distichus_contig106585.559.1|organism=Fucus distichus monoicous|type=polypeptide|length=330bp MANVRSIKINFQGEAHDVTLNTRPPPTLAGLQAAVSSTFCADLPARSRGGback to top mRNA from alignment at F-distichus_contig106585:2..1922- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig106585.559.1 ID=mRNA_F-distichus_contig106585.559.1|Name=mRNA_F-distichus_contig106585.559.1|organism=Fucus distichus monoicous|type=mRNA|length=1921bp|location=Sequence derived from alignment at F-distichus_contig106585:2..1922- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig106585:2..1922- >mRNA_F-distichus_contig106585.559.1 ID=mRNA_F-distichus_contig106585.559.1|Name=mRNA_F-distichus_contig106585.559.1|organism=Fucus distichus monoicous|type=CDS|length=1980bp|location=Sequence derived from alignment at F-distichus_contig106585:2..1922- (Fucus distichus monoicous)back to top |