mRNA_F-distichus_contig10634.541.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig10634.541.1 vs. uniprot
Match: A0A4S4LBP1_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4LBP1_9AGAM) HSP 1 Score: 112 bits (279), Expect = 6.300e-26 Identity = 68/179 (37.99%), Postives = 95/179 (53.07%), Query Frame = 1
Query: 7 IIVLYVNDLLLASKRKENEGRTLSDLSSCFKIEDLGEAEFCLGCHISKNREKRTLLFDQNIYAKTVAKRVSVTKSSMIPTVI-DMKPLSKEGGPKTAREREEMRCIPYRVAVEALMWAVAMIRPDLSFAAQSLAFFCDDPGPVHWKAAKAL-PY*WRTKNLAEERAISPRITTLFETLS 537
II +YV+D+ +A+K K+ + +L FK+ DLG F LG + ++R KR L Q Y + +R ++ + + T + D LSK PK A E M+ +PYR V ALM+ RPD+S+A LA F +PGP HWKAAK L Y TK++ A P LF T S
Sbjct: 133 IIPVYVDDMTIAAKSKDQDLFVKEELEKHFKLHDLGPTSFLLGVRVERDRSKRLLSLSQRQYIIDILERFEMSNCTTVTTPLPDGHRLSKAMAPKDAEEIAFMKTVPYRQLVGALMYLAVATRPDISYAVGVLARFSSNPGPSHWKAAKHLCRYLQGTKDMKLTYAPDPHAPELFTTFS 311
BLAST of mRNA_F-distichus_contig10634.541.1 vs. uniprot
Match: A0A4V3X9G3_9AGAM (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4V3X9G3_9AGAM) HSP 1 Score: 112 bits (279), Expect = 5.960e-25 Identity = 68/179 (37.99%), Postives = 95/179 (53.07%), Query Frame = 1
Query: 7 IIVLYVNDLLLASKRKENEGRTLSDLSSCFKIEDLGEAEFCLGCHISKNREKRTLLFDQNIYAKTVAKRVSVTKSSMIPTVI-DMKPLSKEGGPKTAREREEMRCIPYRVAVEALMWAVAMIRPDLSFAAQSLAFFCDDPGPVHWKAAKAL-PY*WRTKNLAEERAISPRITTLFETLS 537
II +YV+D+ +A+K K+ + +L FK+ DLG F LG + ++R KR L Q Y + +R ++ + + T + D LSK PK A E M+ +PYR V ALM+ RPD+S+A LA F +PGP HWKAAK L Y TK++ A P LF T S
Sbjct: 614 IIPVYVDDMTIAAKSKDQDLFVKEELEKHFKLHDLGPTSFLLGVRVERDRSKRLLSLSQRQYIIDILERFEMSNCTTVTTPLPDGHRLSKAMAPKDAEEIAFMKTVPYRQLVGALMYLAVATRPDISYAVGVLARFSSNPGPSHWKAAKHLCRYLQGTKDMKLTYAPDPHAPELFTTFS 792
BLAST of mRNA_F-distichus_contig10634.541.1 vs. uniprot
Match: A0A4S4K791_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4K791_9AGAM) HSP 1 Score: 110 bits (274), Expect = 9.620e-25 Identity = 68/179 (37.99%), Postives = 94/179 (52.51%), Query Frame = 1
Query: 7 IIVLYVNDLLLASKRKENEGRTLSDLSSCFKIEDLGEAEFCLGCHISKNREKRTLLFDQNIYAKTVAKRVSVTKSSMIPTVI-DMKPLSKEGGPKTAREREEMRCIPYRVAVEALMWAVAMIRPDLSFAAQSLAFFCDDPGPVHWKAAKAL-PY*WRTKNLAEERAISPRITTLFETLS 537
II +YV+D+ +A+K K+ +L FK+ DLG F LG + ++R KR L Q Y + +R ++ + + T + D LSK PK A E M+ +PYR V ALM+ RPD+S+A LA F +PGP HWKAAK L Y TK++ A P LF T S
Sbjct: 233 IIPVYVDDMTIAAKSKDQYLFVKEELEKHFKLHDLGPTSFLLGVRVERDRSKRLLSLSQRQYIIDILERFEMSNCTTVTTPLPDGHRLSKAMAPKDAEEIAFMKTVPYRQLVGALMYLAVATRPDISYAVGVLARFSSNPGPGHWKAAKHLCRYLQGTKDMKLTYAPDPHAPELFTTFS 411
BLAST of mRNA_F-distichus_contig10634.541.1 vs. uniprot
Match: A0A5A7QRB1_STRAF (Gag-pol polyprotein n=2 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7QRB1_STRAF) HSP 1 Score: 109 bits (273), Expect = 4.070e-24 Identity = 68/162 (41.98%), Postives = 95/162 (58.64%), Query Frame = 1
Query: 1 VTIIVLYVNDLLLASKRKENEGRTLSDLSSCFKIEDLGEAEFCLGCHISKNREKRTLLFDQNIYAKTVAKRVSV--TKSSMIPTVIDMKPLSKEGGPKTAREREEMRCIPYRVAVEALMWAVAMIRPDLSFAAQSLAFFCDDPGPVHWKAAK-ALPY*WRTK 477
V +VLYV+D+LL K+ LS F ++DLGEA LG + ++R+KR L Q+ Y TV R S+ +K M+P + PLSKE PKT++E EEM+ +PY AV +LM+A+ RPD+S+A +A + +PG HW A K L Y RTK
Sbjct: 982 VVFLVLYVDDILLIGNSKKELSDVKVWLSKQFDMKDLGEAGHILGIRLIRDRKKRMLCLSQSSYIDTVLARFSMQDSKKGMLPFRHGI-PLSKEMSPKTSKEIEEMKTVPYASAVGSLMYAMLCTRPDISYAVGMVARYQSNPGREHWSAVKHILKYLRRTK 1142
BLAST of mRNA_F-distichus_contig10634.541.1 vs. uniprot
Match: A0A4S4KQD1_9AGAM (DOMON domain-containing protein n=1 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4KQD1_9AGAM) HSP 1 Score: 108 bits (271), Expect = 4.820e-24 Identity = 67/179 (37.43%), Postives = 93/179 (51.96%), Query Frame = 1
Query: 7 IIVLYVNDLLLASKRKENEGRTLSDLSSCFKIEDLGEAEFCLGCHISKNREKRTLLFDQNIYAKTVAKRVSVTKSSMIPTVI-DMKPLSKEGGPKTAREREEMRCIPYRVAVEALMWAVAMIRPDLSFAAQSLAFFCDDPGPVHWKAAKAL-PY*WRTKNLAEERAISPRITTLFETLS 537
II +YV+D+ +A+K K+ +L FK+ DLG F LG + ++R KR L Q Y + +R ++ + + T + D LSK PK A E M+ +PYR V ALM+ RPD+S+A LA F +PGP HWKAAK L Y TK++ P LF T S
Sbjct: 210 IIPVYVDDMTIAAKSKDQYLFVKEELEKHFKLHDLGPTSFLLGVRVERDRSKRLLSLSQRQYIIDILERFEMSNCTTVTTPLPDGHRLSKAMAPKDAEEIAFMKTVPYRQLVGALMYLAVATRPDISYAVGVLARFSSNPGPSHWKAAKHLCRYLQGTKDMKLTYTPDPHAPELFTTFS 388
BLAST of mRNA_F-distichus_contig10634.541.1 vs. uniprot
Match: A0A4S4KX50_9AGAM (Integrase catalytic domain-containing protein n=2 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4KX50_9AGAM) HSP 1 Score: 109 bits (272), Expect = 5.450e-24 Identity = 68/179 (37.99%), Postives = 94/179 (52.51%), Query Frame = 1
Query: 7 IIVLYVNDLLLASKRKENEGRTLSDLSSCFKIEDLGEAEFCLGCHISKNREKRTLLFDQNIYAKTVAKRVSVTKSSMIPTVI-DMKPLSKEGGPKTAREREEMRCIPYRVAVEALMWAVAMIRPDLSFAAQSLAFFCDDPGPVHWKAAKAL-PY*WRTKNLAEERAISPRITTLFETLS 537
II +YV+D+ +A+K K+ +L FK+ DLG F LG + ++R KR L Q Y + +R ++ + + T + D LSK PK A E M+ +PYR V ALM+ RPD+S+A LA F +PGP HWKAAK L Y TK++ A P LF T S
Sbjct: 833 IIPVYVDDMTIAAKSKDQYLFVKEELEKHFKLHDLGPTSFLLGVRVERDRSKRLLSLSQRQYIIDILERFEMSNCTTVTTPLPDGHRLSKAMAPKDAEEIAFMKTVPYRQLVGALMYLAVATRPDISYAVGVLARFSSNPGPGHWKAAKHLCRYLQGTKDMKLTYAPDPYAPELFTTFS 1011
BLAST of mRNA_F-distichus_contig10634.541.1 vs. uniprot
Match: A0A182HAB7_AEDAL (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Aedes albopictus TaxID=7160 RepID=A0A182HAB7_AEDAL) HSP 1 Score: 107 bits (268), Expect = 5.470e-24 Identity = 55/150 (36.67%), Postives = 90/150 (60.00%), Query Frame = 1
Query: 10 IVLYVNDLLLASKRKENEGRTLSDLSSCFKIEDLGEAEFCLGCHISKNREKRTLLFDQNIYAKTVAKRVSVTKSSMIPTVIDMK-PLSKEGGPKTAREREEMRCIPYRVAVEALMWAVAMIRPDLSFAAQSLAFFCDDPGPVHWKAAKAL 456
+ +YV+D L+ + +E + + L+S FK++++GEA+FCLG I+++R L DQ Y K V KR ++ S + T +D L K GPKT E EM+ +P++ AV +L++A RPD++FA ++ F +PG HW+A K +
Sbjct: 97 VTIYVDDFLVFTNDEELKKKLKCYLNSRFKMKNIGEAKFCLGLQITRDRTNGKLFLDQQAYIKDVLKRFNMENSKPVATPMDSNVKLDKSRGPKTPEEMAEMKNVPFKEAVGSLLYAAQATRPDIAFAVNLVSQFSINPGRQHWEAVKRI 246
BLAST of mRNA_F-distichus_contig10634.541.1 vs. uniprot
Match: A0A4V3XD66_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4V3XD66_9AGAM) HSP 1 Score: 107 bits (267), Expect = 2.450e-23 Identity = 67/179 (37.43%), Postives = 93/179 (51.96%), Query Frame = 1
Query: 7 IIVLYVNDLLLASKRKENEGRTLSDLSSCFKIEDLGEAEFCLGCHISKNREKRTLLFDQNIYAKTVAKRVSVTKSSMIPTVI-DMKPLSKEGGPKTAREREEMRCIPYRVAVEALMWAVAMIRPDLSFAAQSLAFFCDDPGPVHWKAAKAL-PY*WRTKNLAEERAISPRITTLFETLS 537
II +YV+D+ +A+K K+ +L FK+ DLG F LG + ++R KR L Q Y + +R ++ + + T + D LSK PK A E M+ +PYR V ALM+ RPD+S+ LA F +PGP HWKAAK L Y TK++ A P LF T S
Sbjct: 305 IIPVYVDDMTIAAKSKDQYLFVKEELEKHFKLHDLGPTSFLLGVRVERDRSKRLLSLSQCQYIIDILERFEMSNCTTVTTPLPDGHRLSKAMAPKDAEEIAFMKTVPYRQLVGALMYLAVATRPDISYTVGVLARFSSNPGPGHWKAAKHLCHYLQGTKDMKLTYAPDPHAPELFTTFS 483
BLAST of mRNA_F-distichus_contig10634.541.1 vs. uniprot
Match: A0A4S4KQ60_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=4 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4KQ60_9AGAM) HSP 1 Score: 107 bits (266), Expect = 2.910e-23 Identity = 67/179 (37.43%), Postives = 93/179 (51.96%), Query Frame = 1
Query: 7 IIVLYVNDLLLASKRKENEGRTLSDLSSCFKIEDLGEAEFCLGCHISKNREKRTLLFDQNIYAKTVAKRVSVTKSSMIPTVI-DMKPLSKEGGPKTAREREEMRCIPYRVAVEALMWAVAMIRPDLSFAAQSLAFFCDDPGPVHWKAAKAL-PY*WRTKNLAEERAISPRITTLFETLS 537
II +YV+D+ +A+K K+ +L FK+ DLG F LG + ++R K L Q Y + +R ++ + + T + D LSK PK A E M+ +PYR V ALM+ RPD+S+A LA F +PGP HWKAAK L Y TK++ A P LF T S
Sbjct: 299 IIPVYVDDMTIAAKSKDQYLFVKEELEKHFKLHDLGPTSFLLGVRVERDRSKCLLSLSQRQYIIDILERFEMSNCTTVTTPLPDGHRLSKAMAPKDAEEIAFMKTVPYRQLVGALMYLAVATRPDISYAVGVLARFSSNPGPGHWKAAKHLCRYLQGTKDMKLTYAPDPHAPELFTTFS 477
BLAST of mRNA_F-distichus_contig10634.541.1 vs. uniprot
Match: A0A4S4KJ58_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Phellinidium pouzarii TaxID=167371 RepID=A0A4S4KJ58_9AGAM) HSP 1 Score: 104 bits (260), Expect = 1.970e-22 Identity = 59/151 (39.07%), Postives = 83/151 (54.97%), Query Frame = 1
Query: 7 IIVLYVNDLLLASKRKENEGRTLSDLSSCFKIEDLGEAEFCLGCHISKNREKRTLLFDQNIYAKTVAKRVSVTKSSMIPTVI-DMKPLSKEGGPKTAREREEMRCIPYRVAVEALMWAVAMIRPDLSFAAQSLAFFCDDPGPVHWKAAKAL 456
II +YV+D+ +A+K K+ +L FK+ DLG F LG + ++R KR L Q Y + +R ++ + + T + D LSK PK A E M+ +PYR V ALM+ RPD+S+A LA F +PGP HWKAAK L
Sbjct: 525 IIPVYVDDMTIAAKSKDQYLFVKEELEKHFKLHDLGPTSFLLGVRVERDRSKRLLSLSQRQYIIDILERFEMSNCTTVTTPLPDGHRLSKAMAPKDAEEIAFMKTVPYRQLVGALMYLAVATRPDISYAVGVLARFSSNPGPGHWKAAKHL 675 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10634.541.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig10634.541.1 >prot_F-distichus_contig10634.541.1 ID=prot_F-distichus_contig10634.541.1|Name=mRNA_F-distichus_contig10634.541.1|organism=Fucus distichus monoicous|type=polypeptide|length=77bp MIPTVIDMKPLSKEGGPKTAREREEMRCIPYRVAVEALMWAVAMIRPDLSback to top mRNA from alignment at F-distichus_contig10634:945..1905- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig10634.541.1 ID=mRNA_F-distichus_contig10634.541.1|Name=mRNA_F-distichus_contig10634.541.1|organism=Fucus distichus monoicous|type=mRNA|length=961bp|location=Sequence derived from alignment at F-distichus_contig10634:945..1905- (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig10634:945..1905- >mRNA_F-distichus_contig10634.541.1 ID=mRNA_F-distichus_contig10634.541.1|Name=mRNA_F-distichus_contig10634.541.1|organism=Fucus distichus monoicous|type=CDS|length=462bp|location=Sequence derived from alignment at F-distichus_contig10634:945..1905- (Fucus distichus monoicous)back to top |