prot_F-distichus_contig10634.541.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig10634.541.1
Unique Nameprot_F-distichus_contig10634.541.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length77
Homology
BLAST of mRNA_F-distichus_contig10634.541.1 vs. uniprot
Match: A0A085N6C0_9BILA (Uncharacterized protein n=1 Tax=Trichuris suis TaxID=68888 RepID=A0A085N6C0_9BILA)

HSP 1 Score: 68.2 bits (165), Expect = 1.350e-11
Identity = 31/64 (48.44%), Postives = 42/64 (65.62%), Query Frame = 0
Query:   11 LSKEGGPKTAREREEMRCIPYRVAVEALMWAVAMIRPDLSFAAQSLAFFCDDPGPVHWKAAKAL 74
            LSK+ GP T  ER EM  IPY+ AV +LM+ +   RPD+SF    ++ F +DPG +HWKA K +
Sbjct: 2474 LSKDMGPSTTDERNEMLKIPYKAAVGSLMFLMTCSRPDISFEPSKVSQFAEDPGLLHWKAVKRI 2537          
BLAST of mRNA_F-distichus_contig10634.541.1 vs. uniprot
Match: A0A5A7QRB1_STRAF (Gag-pol polyprotein n=2 Tax=Striga asiatica TaxID=4170 RepID=A0A5A7QRB1_STRAF)

HSP 1 Score: 67.4 bits (163), Expect = 2.500e-11
Identity = 31/65 (47.69%), Postives = 44/65 (67.69%), Query Frame = 0
Query:   10 PLSKEGGPKTAREREEMRCIPYRVAVEALMWAVAMIRPDLSFAAQSLAFFCDDPGPVHWKAAKAL 74
            PLSKE  PKT++E EEM+ +PY  AV +LM+A+   RPD+S+A   +A +  +PG  HW A K +
Sbjct: 1070 PLSKEMSPKTSKEIEEMKTVPYASAVGSLMYAMLCTRPDISYAVGMVARYQSNPGREHWSAVKHI 1134          
BLAST of mRNA_F-distichus_contig10634.541.1 vs. uniprot
Match: UPI001E1BCD31 (secreted RxLR effector protein 161-like n=1 Tax=Daphnia magna TaxID=35525 RepID=UPI001E1BCD31)

HSP 1 Score: 62.0 bits (149), Expect = 1.160e-9
Identity = 28/65 (43.08%), Postives = 41/65 (63.08%), Query Frame = 0
Query:   10 PLSKEGGPKTAREREEMRCIPYRVAVEALMWAVAMIRPDLSFAAQSLAFFCDDPGPVHWKAAKAL 74
            PL+    P+  +E+EEM+ IPY+ AV AL++     RPD+S+A   +A F  +PG  HWKA K +
Sbjct:   16 PLTSSMSPQQQKEKEEMKNIPYKEAVGALLYLSTTTRPDISYAVGQVAKFSQNPGIQHWKAVKRI 80          
BLAST of mRNA_F-distichus_contig10634.541.1 vs. uniprot
Match: A0A438G0F7_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Vitis vinifera TaxID=29760 RepID=A0A438G0F7_VITVI)

HSP 1 Score: 62.4 bits (150), Expect = 1.440e-9
Identity = 32/73 (43.84%), Postives = 43/73 (58.90%), Query Frame = 0
Query:    2 IPTVIDMKPLSKEGGPKTAREREEMRCIPYRVAVEALMWAVAMIRPDLSFAAQSLAFFCDDPGPVHWKAAKAL 74
            I  ++    LSK   P+   ERE+M+ IPY +AV +LM+A    RPD+SF    L  +  DPG  HWKAAK +
Sbjct:  781 IALILKGDKLSKMQCPRNNMEREQMKKIPYALAVGSLMYAQTCTRPDISFVVGMLGRYQSDPGFEHWKAAKKV 853          
BLAST of mRNA_F-distichus_contig10634.541.1 vs. uniprot
Match: UPI001E1BDE4E (secreted RxLR effector protein 161-like n=1 Tax=Daphnia magna TaxID=35525 RepID=UPI001E1BDE4E)

HSP 1 Score: 59.3 bits (142), Expect = 1.180e-8
Identity = 29/64 (45.31%), Postives = 40/64 (62.50%), Query Frame = 0
Query:   11 LSKEGGPKTAREREEMRCIPYRVAVEALMWAVAMIRPDLSFAAQSLAFFCDDPGPVHWKAAKAL 74
            LS    P+T +E EEM+ IPY+ AV AL++     RPD+S+A   +A F  +PG  HWKA K +
Sbjct:   17 LSLNMSPQTDKEVEEMKQIPYKEAVGALLYLSTTTRPDISYAVGQVAKFNHNPGVQHWKAVKRI 80          
BLAST of mRNA_F-distichus_contig10634.541.1 vs. uniprot
Match: A0A2P4WYY5_9STRA (Integrase catalytic core protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WYY5_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 1.250e-8
Identity = 28/71 (39.44%), Postives = 45/71 (63.38%), Query Frame = 0
Query:    2 IPTVIDMKPLSKEGGPKTAREREEMRCIPYRVAVEALMWAVAMIRPDLSFAAQSLAFFCDDPGPVHWKAAK 72
            +P+ +D+KP SK   P T  E+E M   PYR  + +LM+ +   RPDL++  +  + F ++PG +HW+AAK
Sbjct:  262 VPSAVDLKP-SKVMCPTTNEEKELMSGKPYRAVIGSLMYLMLDTRPDLAYLVRECSQFLENPGILHWRAAK 331          
BLAST of mRNA_F-distichus_contig10634.541.1 vs. uniprot
Match: A0A803PEQ2_CANSA (Uncharacterized protein n=1 Tax=Cannabis sativa TaxID=3483 RepID=A0A803PEQ2_CANSA)

HSP 1 Score: 57.0 bits (136), Expect = 1.490e-8
Identity = 25/62 (40.32%), Postives = 39/62 (62.90%), Query Frame = 0
Query:   11 LSKEGGPKTAREREEMRCIPYRVAVEALMWAVAMIRPDLSFAAQSLAFFCDDPGPVHWKAAK 72
            LSKE  PKT +E E M+ +PY  A+ ++++ +   RPDL +A   L+ + ++PG  HW A K
Sbjct:   17 LSKEQSPKTEKEIEAMKDVPYSNAIGSVIYLMVSTRPDLGYATSVLSKYMENPGKFHWLAMK 78          
BLAST of mRNA_F-distichus_contig10634.541.1 vs. uniprot
Match: UPI001E1BB9B0 (secreted RxLR effector protein 161-like n=1 Tax=Daphnia magna TaxID=35525 RepID=UPI001E1BB9B0)

HSP 1 Score: 58.2 bits (139), Expect = 1.490e-8
Identity = 27/58 (46.55%), Postives = 38/58 (65.52%), Query Frame = 0
Query:   17 PKTAREREEMRCIPYRVAVEALMWAVAMIRPDLSFAAQSLAFFCDDPGPVHWKAAKAL 74
            P+T +E EEM+ IPY+ AV AL++     RPD+S+A   +A F  +PG  HWKA K +
Sbjct:    3 PQTDKEVEEMKQIPYKEAVGALLYLSTTTRPDISYAVGQVAKFNHNPGVQHWKAVKRI 60          
BLAST of mRNA_F-distichus_contig10634.541.1 vs. uniprot
Match: UPI001E1BA9BB (uncharacterized protein LOC116922675 n=1 Tax=Daphnia magna TaxID=35525 RepID=UPI001E1BA9BB)

HSP 1 Score: 59.3 bits (142), Expect = 1.670e-8
Identity = 29/64 (45.31%), Postives = 40/64 (62.50%), Query Frame = 0
Query:   11 LSKEGGPKTAREREEMRCIPYRVAVEALMWAVAMIRPDLSFAAQSLAFFCDDPGPVHWKAAKAL 74
            LS    P+T +E EEM+ IPY+ AV AL++     RPD+S+A   +A F  +PG  HWKA K +
Sbjct:  260 LSLNMSPQTDKEVEEMKQIPYKEAVGALLYLSTTTRPDISYAVGQVAKFNHNPGVQHWKAVKRI 323          
BLAST of mRNA_F-distichus_contig10634.541.1 vs. uniprot
Match: A0A8J5FNJ9_ZINOF (Integrase catalytic domain-containing protein n=1 Tax=Zingiber officinale TaxID=94328 RepID=A0A8J5FNJ9_ZINOF)

HSP 1 Score: 58.9 bits (141), Expect = 2.370e-8
Identity = 26/64 (40.62%), Postives = 40/64 (62.50%), Query Frame = 0
Query:   11 LSKEGGPKTAREREEMRCIPYRVAVEALMWAVAMIRPDLSFAAQSLAFFCDDPGPVHWKAAKAL 74
            LSKE  PKT++E E+M+ +PY  AV + M+A+   RPD+ F    ++ +  +PG  HW A K +
Sbjct:  600 LSKEMSPKTSKEIEDMKAVPYASAVGSFMYAMLCTRPDICFVVGMVSRYQSNPGQGHWTAVKHI 663          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig10634.541.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A085N6C0_9BILA1.350e-1148.44Uncharacterized protein n=1 Tax=Trichuris suis Tax... [more]
A0A5A7QRB1_STRAF2.500e-1147.69Gag-pol polyprotein n=2 Tax=Striga asiatica TaxID=... [more]
UPI001E1BCD311.160e-943.08secreted RxLR effector protein 161-like n=1 Tax=Da... [more]
A0A438G0F7_VITVI1.440e-943.84Retrovirus-related Pol polyprotein from transposon... [more]
UPI001E1BDE4E1.180e-845.31secreted RxLR effector protein 161-like n=1 Tax=Da... [more]
A0A2P4WYY5_9STRA1.250e-839.44Integrase catalytic core protein n=1 Tax=Phytophth... [more]
A0A803PEQ2_CANSA1.490e-840.32Uncharacterized protein n=1 Tax=Cannabis sativa Ta... [more]
UPI001E1BB9B01.490e-846.55secreted RxLR effector protein 161-like n=1 Tax=Da... [more]
UPI001E1BA9BB1.670e-845.31uncharacterized protein LOC116922675 n=1 Tax=Daphn... [more]
A0A8J5FNJ9_ZINOF2.370e-840.63Integrase catalytic domain-containing protein n=1 ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig10634contigF-distichus_contig10634:1441..1671 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig10634.541.1mRNA_F-distichus_contig10634.541.1Fucus distichus monoicousmRNAF-distichus_contig10634 945..1905 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig10634.541.1 ID=prot_F-distichus_contig10634.541.1|Name=mRNA_F-distichus_contig10634.541.1|organism=Fucus distichus monoicous|type=polypeptide|length=77bp
MIPTVIDMKPLSKEGGPKTAREREEMRCIPYRVAVEALMWAVAMIRPDLS
FAAQSLAFFCDDPGPVHWKAAKALPY*
back to top