mRNA_F-distichus_contig106178.524.1 (mRNA) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig106178.524.1 vs. uniprot
Match: A0A6H5K8M2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8M2_9PHAE) HSP 1 Score: 152 bits (385), Expect = 1.390e-40 Identity = 87/153 (56.86%), Postives = 95/153 (62.09%), Query Frame = 1
Query: 28 FQIGELRKHQLLEVRVRCYALRHERLT--PMASDPKTKPNGGSEGDGF-------------------------------ASDHGAERQQQVYFQCHSMRLQHPDDELGGNLLLVLPQ---TVVHRIDAWSPMMPPPRWNSTHGLVHWGLHSDR 378
FQIGELRKHQLLE RVRCYALRHERLT P ++ G SE G A++ A QV+FQ HSMRLQHPDDELGGNLLLVLPQ TVVHRIDAWSPMMPPPRWNS+HG V WGLH+D+
Sbjct: 244 FQIGELRKHQLLETRVRCYALRHERLTYNPCGNNNNV---GSSESSGLGARSASVSSNIXXXXXXXXXXXXXXSTTVTSAAELAARMPDQVFFQSHSMRLQHPDDELGGNLLLVLPQARGTVVHRIDAWSPMMPPPRWNSSHGPVQWGLHTDK 393
BLAST of mRNA_F-distichus_contig106178.524.1 vs. uniprot
Match: A0A7S2JZ67_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JZ67_9STRA) HSP 1 Score: 102 bits (254), Expect = 5.610e-23 Identity = 52/110 (47.27%), Postives = 66/110 (60.00%), Query Frame = 1
Query: 28 FQIGELRKHQLLEVRVRCYALRHERLTPMASDPKTKPNGGSEGDGFASDHGAERQQQVYFQCHSMRLQHPDDELGGNLLLVLPQTVVHRIDAWSPMMPPPRWNSTHGLVH 357
FQ+ ELRKHQL+E VR Y +RHER ++D + + S E YFQ H+MRLQHPDD LGG LL+ LP VVHR+D +SP+MPP +W G +H
Sbjct: 250 FQLCELRKHQLVEAHVRVYCVRHEREHKESNDVEMRKESSS----XXXVDEEEEPDTCYFQTHAMRLQHPDDALGGFLLMALPNVVVHRLDKFSPLMPPAKWTDASGQIH 355
BLAST of mRNA_F-distichus_contig106178.524.1 vs. uniprot
Match: F2TZV9_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2TZV9_SALR5) HSP 1 Score: 87.8 bits (216), Expect = 9.020e-18 Identity = 51/112 (45.54%), Postives = 64/112 (57.14%), Query Frame = 1
Query: 28 FQIGELRKHQLLEVRVRCYALRHE------RLTPMASDPKTKPNGGSEGDGFASDHGAERQQQVYFQCHSMRLQHPDDELGGNLLLVLPQTVVHRIDAWSPMMPPPRWNSTH 345
FQ+ +L+K+ L+E VR YA+RH R P +S P + S H V+FQ H+MRL HP+DELGG LLL LP V+HRIDAWSP+MP P S H
Sbjct: 248 FQVCDLKKYALVEAHVRMYAIRHRTVSSGGRAVPRSSGP-ARTISSSSSPPLDPTH-------VWFQSHAMRLTHPNDELGGMLLLSLPDQVLHRIDAWSPLMPTPHDGSEH 351
BLAST of mRNA_F-distichus_contig106178.524.1 vs. uniprot
Match: K3WWT5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WWT5_GLOUD) HSP 1 Score: 87.4 bits (215), Expect = 1.170e-17 Identity = 48/110 (43.64%), Postives = 58/110 (52.73%), Query Frame = 1
Query: 28 FQIGELRKHQLLEVRVRCYALRHERLTPMASDPKTKPNGGSEGDGFASDHGAERQQQVYFQCHSMRLQHPDDELGGNLLLVLPQTVVHRIDAWSPMMPPPRWNSTHGLVH 357
FQ E+RKHQL+E VR YA+RH+ E Q YFQ H MR+QHPDD+LGG +LL LP VVHR+DAWSP+ P S G+ H
Sbjct: 228 FQACEMRKHQLVEAHVRMYAIRHD---------------------------VEFGQHYYFQSHPMRIQHPDDDLGGMMLLALPSVVVHRMDAWSPLCRPKSTPSLCGMHH 310
BLAST of mRNA_F-distichus_contig106178.524.1 vs. uniprot
Match: A0A3M6VL42_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VL42_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 2.630e-17 Identity = 48/110 (43.64%), Postives = 62/110 (56.36%), Query Frame = 1
Query: 28 FQIGELRKHQLLEVRVRCYALRHERLTPMASDPKTKPNGGSEGDGFASDHGAERQQQVYFQCHSMRLQHPDDELGGNLLLVLPQTVVHRIDAWSPMMPPPRWNSTHGLVH 357
FQ+ E+RKHQL+E VR YA+RH+ E ++ YFQ + MR+QHPDD+LGG LLL LP VVHR+DAWSP++ P + T GL H
Sbjct: 143 FQVCEMRKHQLVEAHVRMYAIRHDE---------------------------EFGERYYFQSYPMRIQHPDDDLGGMLLLALPSVVVHRMDAWSPLLRP-KSAETCGLHH 224
BLAST of mRNA_F-distichus_contig106178.524.1 vs. uniprot
Match: A0A3R7G2I9_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7G2I9_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 2.840e-17 Identity = 48/110 (43.64%), Postives = 62/110 (56.36%), Query Frame = 1
Query: 28 FQIGELRKHQLLEVRVRCYALRHERLTPMASDPKTKPNGGSEGDGFASDHGAERQQQVYFQCHSMRLQHPDDELGGNLLLVLPQTVVHRIDAWSPMMPPPRWNSTHGLVH 357
FQ+ E+RKHQL+E VR YA+RH+ E ++ YFQ + MR+QHPDD+LGG LLL LP VVHR+DAWSP++ P + T GL H
Sbjct: 209 FQVCEMRKHQLVEAHVRMYAVRHD---------------------------VEFGERYYFQSYPMRIQHPDDDLGGMLLLALPSVVVHRMDAWSPLLRP-KCAETCGLHH 290
BLAST of mRNA_F-distichus_contig106178.524.1 vs. uniprot
Match: A0A836CL18_9STRA (Inward rectifier potassium channel-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL18_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 5.560e-17 Identity = 46/84 (54.76%), Postives = 55/84 (65.48%), Query Frame = 1
Query: 28 FQIGELRKHQLLEVRVRCYALRHERLTPMASDPKTKPNGGSEGDGFASDHGAERQQQVYFQCHSMRLQHPDDELGGNLLLVLPQ 279
FQ+GELRKHQLLE +VRCYA+RH R P+ + G D A + V++Q H+MRLQHPDDELGG LLLVLPQ
Sbjct: 168 FQVGELRKHQLLETKVRCYAVRHHRTLPIDAA------------GCLDD--ANPPETVHYQTHNMRLQHPDDELGGALLLVLPQ 237
BLAST of mRNA_F-distichus_contig106178.524.1 vs. uniprot
Match: A0A2D4BP43_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BP43_PYTIN) HSP 1 Score: 85.1 bits (209), Expect = 7.820e-17 Identity = 46/99 (46.46%), Postives = 55/99 (55.56%), Query Frame = 1
Query: 28 FQIGELRKHQLLEVRVRCYALRHERLTPMASDPKTKPNGGSEGDGFASDHGAERQQQVYFQCHSMRLQHPDDELGGNLLLVLPQTVVHRIDAWSPMMPP 324
FQ+ E+RKHQL+E VR YA+RH+ E Q YFQ + MR+QHPDDELGG LLL LP VVHRID WSP++ P
Sbjct: 227 FQVCEMRKHQLVEGHVRMYAVRHD---------------------------VEXGQHYYFQSYPMRIQHPDDELGGMLLLALPSVVVHRIDPWSPLLRP 298
BLAST of mRNA_F-distichus_contig106178.524.1 vs. uniprot
Match: A0A6G0WFX3_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WFX3_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 8.320e-17 Identity = 46/99 (46.46%), Postives = 59/99 (59.60%), Query Frame = 1
Query: 28 FQIGELRKHQLLEVRVRCYALRHERLTPMASDPKTKPNGGSEGDGFASDHGAERQQQVYFQCHSMRLQHPDDELGGNLLLVLPQTVVHRIDAWSPMMPP 324
FQ+ E R+HQL+E VRCYA+R+ M++D +++ + FQ H MRLQ PDDELGG LL+ LPQ VVHRID WSP+ PP
Sbjct: 202 FQVCERRRHQLVEAHVRCYAVRNA----MSADGESE---------------------LLFQPHPMRLQQPDDELGGVLLMALPQMVVHRIDPWSPLFPP 275
BLAST of mRNA_F-distichus_contig106178.524.1 vs. uniprot
Match: H3GC74_PHYRM (Uncharacterized protein n=22 Tax=Phytophthora TaxID=4783 RepID=H3GC74_PHYRM) HSP 1 Score: 84.0 bits (206), Expect = 1.890e-16 Identity = 44/99 (44.44%), Postives = 56/99 (56.57%), Query Frame = 1
Query: 28 FQIGELRKHQLLEVRVRCYALRHERLTPMASDPKTKPNGGSEGDGFASDHGAERQQQVYFQCHSMRLQHPDDELGGNLLLVLPQTVVHRIDAWSPMMPP 324
FQ+ E+RKHQL+E VR YA+RH+ E + YFQ + MR+QHPDD+LGG LLL LP VVHR+DAWSP++ P
Sbjct: 207 FQVCEMRKHQLVEAHVRMYAIRHDE---------------------------EFGEHYYFQSYPMRIQHPDDDLGGMLLLALPSVVVHRMDAWSPLLRP 278 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig106178.524.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-distichus_contig106178.524.1 >prot_F-distichus_contig106178.524.1 ID=prot_F-distichus_contig106178.524.1|Name=mRNA_F-distichus_contig106178.524.1|organism=Fucus distichus monoicous|type=polypeptide|length=126bp MRRCAASSRFQIGELRKHQLLEVRVRCYALRHERLTPMASDPKTKPNGGSback to top mRNA from alignment at F-distichus_contig106178:243..1095+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-distichus_contig106178.524.1 ID=mRNA_F-distichus_contig106178.524.1|Name=mRNA_F-distichus_contig106178.524.1|organism=Fucus distichus monoicous|type=mRNA|length=853bp|location=Sequence derived from alignment at F-distichus_contig106178:243..1095+ (Fucus distichus monoicous)back to top Coding sequence (CDS) from alignment at F-distichus_contig106178:243..1095+ >mRNA_F-distichus_contig106178.524.1 ID=mRNA_F-distichus_contig106178.524.1|Name=mRNA_F-distichus_contig106178.524.1|organism=Fucus distichus monoicous|type=CDS|length=756bp|location=Sequence derived from alignment at F-distichus_contig106178:243..1095+ (Fucus distichus monoicous)back to top |