prot_F-distichus_contig99784.19414.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig99784.19414.1
Unique Nameprot_F-distichus_contig99784.19414.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length200
Homology
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BLAST of mRNA_F-distichus_contig99784.19414.1 vs. uniprot
Match: D7FZR7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR7_ECTSI)

HSP 1 Score: 180 bits (457), Expect = 6.780e-51
Identity = 93/140 (66.43%), Postives = 114/140 (81.43%), Query Frame = 0 
Query:   52 MDFTLARFALNTAMASGRTTPEVMLNSGATALLGGMLSNSNAAVVGPAVMALSQMARHPACQRSLGLAGVIPPMVLLCFSSQSPVVLIQTCIALAQLSRYIPNKAIVAGKGGVAAILPLLKGYTREERITVEVLERGLLA 191
            MDFT ARFALN A+AS RT PEVML +GA A L GML+N N  V GPAV+ALSQMA H ACQR+LGLAG IPP+VLLCF+SQSP VL+Q CI++AQLSRY PN+AI+A KGGVAA++ LL+G+ RE+ +T +V+ + L A
Sbjct:    1 MDFTFARFALNMAIASSRTEPEVMLKAGAPAFLVGMLTNPNELVTGPAVLALSQMAHHEACQRALGLAGGIPPLVLLCFTSQSPAVLVQACISIAQLSRYPPNRAIIAAKGGVAAMVRLLEGFRREDHVTEQVIGQALTA 140
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig99784.19414.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FZR7_ECTSI6.780e-5166.43Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 3..191
e-value: 2.1E-12
score: 48.8
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 73..173

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 3..191
e-value: 2.1E-12
score: 48.8
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 73..173

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig99784contigF-distichus_contig99784:259..1913 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig99784.19414.1mRNA_F-distichus_contig99784.19414.1Fucus distichus monoicousmRNAF-distichus_contig99784 259..1913 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig99784.19414.1 ID=prot_F-distichus_contig99784.19414.1|Name=mRNA_F-distichus_contig99784.19414.1|organism=Fucus distichus monoicous|type=polypeptide|length=200bp
RRLCDETDKKGKRMARAAKRIADSEREEKTVLCQWLNGFLVCPSSDLSLS
SMDFTLARFALNTAMASGRTTPEVMLNSGATALLGGMLSNSNAAVVGPAV
MALSQMARHPACQRSLGLAGVIPPMVLLCFSSQSPVVLIQTCIALAQLSR
YIPNKAIVAGKGGVAAILPLLKGYTREERITVEVLERGLLARFLRYRWD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR016024ARM-type_fold