prot_F-distichus_contig99478.19391.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig99478.19391.1
Unique Nameprot_F-distichus_contig99478.19391.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length238
Homology
BLAST of mRNA_F-distichus_contig99478.19391.1 vs. uniprot
Match: A0A6H5JIA6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIA6_9PHAE)

HSP 1 Score: 99.8 bits (247), Expect = 6.080e-21
Identity = 46/51 (90.20%), Postives = 49/51 (96.08%), Query Frame = 0
Query:  182 KAPPRGNNLLVVGLGNPGKQYKFTRHNAGFLVAEELARRHGGTLKIRTAFQ 232
            KAPPRG+NLLVVGLGNPG +YK TRHNAGFLVAEELARRHGGTLKI+TAFQ
Sbjct:  168 KAPPRGDNLLVVGLGNPGDKYKMTRHNAGFLVAEELARRHGGTLKIKTAFQ 218          
BLAST of mRNA_F-distichus_contig99478.19391.1 vs. uniprot
Match: A0A4D9CWV7_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CWV7_9STRA)

HSP 1 Score: 70.9 bits (172), Expect = 2.000e-10
Identity = 31/48 (64.58%), Postives = 37/48 (77.08%), Query Frame = 0
Query:  185 PRGNNLLVVGLGNPGKQYKFTRHNAGFLVAEELARRHGGTLKIRTAFQ 232
            PR  NLL+VGLGNPGK+Y  TRHNAGFL  + LARR G   ++R+AFQ
Sbjct:  742 PRSKNLLIVGLGNPGKEYAMTRHNAGFLAVDLLARRLGADFRLRSAFQ 789          
BLAST of mRNA_F-distichus_contig99478.19391.1 vs. uniprot
Match: A0A536NUD2_9CHLR (Peptidyl-tRNA hydrolase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A536NUD2_9CHLR)

HSP 1 Score: 68.2 bits (165), Expect = 2.170e-10
Identity = 29/47 (61.70%), Postives = 37/47 (78.72%), Query Frame = 0
Query:  184 PPRGNNLLVVGLGNPGKQYKFTRHNAGFLVAEELARRHGGTLKIRTA 230
            PP  +  LV+GLGNPG++Y+ +RHN GFLVA+ELARRHGG +  R A
Sbjct:    9 PPAADRWLVIGLGNPGREYERSRHNLGFLVADELARRHGGRISDRAA 55          
BLAST of mRNA_F-distichus_contig99478.19391.1 vs. uniprot
Match: A0A535HAL7_9CHLR (Peptidyl-tRNA hydrolase n=2 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535HAL7_9CHLR)

HSP 1 Score: 65.1 bits (157), Expect = 2.830e-9
Identity = 28/47 (59.57%), Postives = 35/47 (74.47%), Query Frame = 0
Query:  184 PPRGNNLLVVGLGNPGKQYKFTRHNAGFLVAEELARRHGGTLKIRTA 230
            PP G+  LV+GLGNPG+ Y+ +RHN GFLV +ELARRHG  +  R A
Sbjct:    8 PPAGDRWLVIGLGNPGRDYERSRHNLGFLVVDELARRHGARVTDRAA 54          
BLAST of mRNA_F-distichus_contig99478.19391.1 vs. uniprot
Match: A0A2E8LHH6_9ACTN (Peptidyl-tRNA hydrolase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E8LHH6_9ACTN)

HSP 1 Score: 64.7 bits (156), Expect = 4.630e-9
Identity = 28/37 (75.68%), Postives = 32/37 (86.49%), Query Frame = 0
Query:  190 LLVVGLGNPGKQYKFTRHNAGFLVAEELARRHGGTLK 226
            LLVVGLGNPG++Y+ TRHN GF   EELARRHGG+LK
Sbjct:   21 LLVVGLGNPGREYEGTRHNVGFAAVEELARRHGGSLK 57          
BLAST of mRNA_F-distichus_contig99478.19391.1 vs. uniprot
Match: A0A2W4QA11_9PROT (Peptidyl-tRNA hydrolase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4QA11_9PROT)

HSP 1 Score: 64.3 bits (155), Expect = 5.480e-9
Identity = 25/45 (55.56%), Postives = 36/45 (80.00%), Query Frame = 0
Query:  191 LVVGLGNPGKQYKFTRHNAGFLVAEELARRHGGTLKIRTAFQVDI 235
            L+VGLGNPG++Y+ TRHNAGF + +ELARRHGG  ++   F+ ++
Sbjct:    8 LIVGLGNPGREYEATRHNAGFWLVDELARRHGGAFRLEPRFRAEL 52          
BLAST of mRNA_F-distichus_contig99478.19391.1 vs. uniprot
Match: A0A7W0N1G4_9ACTN (Peptidyl-tRNA hydrolase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7W0N1G4_9ACTN)

HSP 1 Score: 63.9 bits (154), Expect = 8.650e-9
Identity = 26/38 (68.42%), Postives = 34/38 (89.47%), Query Frame = 0
Query:  189 NLLVVGLGNPGKQYKFTRHNAGFLVAEELARRHGGTLK 226
            +LLV GLGNPG++Y+ TRHN GF+VA+ELARRHGG+ +
Sbjct:   14 DLLVAGLGNPGREYERTRHNVGFMVADELARRHGGSFR 51          
BLAST of mRNA_F-distichus_contig99478.19391.1 vs. uniprot
Match: A0A7W0P6Y8_9ACTN (Peptidyl-tRNA hydrolase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7W0P6Y8_9ACTN)

HSP 1 Score: 63.5 bits (153), Expect = 1.040e-8
Identity = 28/45 (62.22%), Postives = 37/45 (82.22%), Query Frame = 0
Query:  189 NLLVVGLGNPGKQYKFTRHNAGFLVAEELARRHGGTLKIRTAFQV 233
            +LLV GLGNPG+ Y+ TRHN G+LVA+ELARRHGG+ + + A +V
Sbjct:   15 DLLVAGLGNPGRSYESTRHNIGWLVADELARRHGGSFRSKFAGRV 59          
BLAST of mRNA_F-distichus_contig99478.19391.1 vs. uniprot
Match: A0A023X0V5_9ACTN (Peptidyl-tRNA hydrolase n=2 Tax=Rubrobacter radiotolerans TaxID=42256 RepID=A0A023X0V5_9ACTN)

HSP 1 Score: 63.5 bits (153), Expect = 1.140e-8
Identity = 29/49 (59.18%), Postives = 38/49 (77.55%), Query Frame = 0
Query:  185 PRGNNLLVVGLGNPGKQYKFTRHNAGFLVAEELARRHGGTLKIRTAFQV 233
            PR    +VVGLGNPG++Y+ TRHN GFLVA+ELARR+GG+ + R   +V
Sbjct:   25 PRRKLPVVVGLGNPGRRYERTRHNVGFLVADELARRYGGSWRARKRSEV 73          
BLAST of mRNA_F-distichus_contig99478.19391.1 vs. uniprot
Match: A0A1A6C0D8_9GAMM (Peptidyl-tRNA hydrolase n=1 Tax=Acidihalobacter prosperus TaxID=160660 RepID=A0A1A6C0D8_9GAMM)

HSP 1 Score: 63.2 bits (152), Expect = 1.280e-8
Identity = 28/45 (62.22%), Postives = 33/45 (73.33%), Query Frame = 0
Query:  191 LVVGLGNPGKQYKFTRHNAGFLVAEELARRHGGTLKIRTAFQVDI 235
            L+VGLGNPG QY  TRHNAGF   +ELARRHG TL+  T F  ++
Sbjct:    7 LIVGLGNPGPQYDRTRHNAGFWFLDELARRHGATLRAETRFSGEV 51          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig99478.19391.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JIA6_9PHAE6.080e-2190.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A4D9CWV7_9STRA2.000e-1064.58Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A536NUD2_9CHLR2.170e-1061.70Peptidyl-tRNA hydrolase n=1 Tax=Chloroflexi bacter... [more]
A0A535HAL7_9CHLR2.830e-959.57Peptidyl-tRNA hydrolase n=2 Tax=Chloroflexi bacter... [more]
A0A2E8LHH6_9ACTN4.630e-975.68Peptidyl-tRNA hydrolase n=2 Tax=Acidimicrobiaceae ... [more]
A0A2W4QA11_9PROT5.480e-955.56Peptidyl-tRNA hydrolase n=1 Tax=Proteobacteria bac... [more]
A0A7W0N1G4_9ACTN8.650e-968.42Peptidyl-tRNA hydrolase n=1 Tax=Actinomycetia bact... [more]
A0A7W0P6Y8_9ACTN1.040e-862.22Peptidyl-tRNA hydrolase n=1 Tax=Actinomycetia bact... [more]
A0A023X0V5_9ACTN1.140e-859.18Peptidyl-tRNA hydrolase n=2 Tax=Rubrobacter radiot... [more]
A0A1A6C0D8_9GAMM1.280e-862.22Peptidyl-tRNA hydrolase n=1 Tax=Acidihalobacter pr... [more]

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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001328Peptidyl-tRNA hydrolasePFAMPF01195Pept_tRNA_hydrocoord: 191..221
e-value: 5.0E-10
score: 39.6
IPR036416Peptidyl-tRNA hydrolase superfamilyGENE3D3.40.50.1470coord: 187..237
e-value: 2.7E-12
score: 48.7
IPR036416Peptidyl-tRNA hydrolase superfamilySUPERFAMILY53178Peptidyl-tRNA hydrolase-likecoord: 190..232
IPR018171Peptidyl-tRNA hydrolase, conserved sitePROSITEPS01195PEPT_TRNA_HYDROL_1coord: 202..215
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..237
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..30
score: 0.486

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001328Peptidyl-tRNA hydrolasePFAMPF01195Pept_tRNA_hydrocoord: 191..221
e-value: 5.0E-10
score: 39.6
IPR036416Peptidyl-tRNA hydrolase superfamilyGENE3D3.40.50.1470coord: 187..237
e-value: 2.7E-12
score: 48.7
IPR036416Peptidyl-tRNA hydrolase superfamilySUPERFAMILY53178Peptidyl-tRNA hydrolase-likecoord: 190..232
IPR018171Peptidyl-tRNA hydrolase, conserved sitePROSITEPS01195PEPT_TRNA_HYDROL_1coord: 202..215
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 22..30
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 31..237
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..30
score: 0.486

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig99478contigF-distichus_contig99478:1267..1980 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig99478.19391.1mRNA_F-distichus_contig99478.19391.1Fucus distichus monoicousmRNAF-distichus_contig99478 1201..2117 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig99478.19391.1 ID=prot_F-distichus_contig99478.19391.1|Name=mRNA_F-distichus_contig99478.19391.1|organism=Fucus distichus monoicous|type=polypeptide|length=238bp
MRGQRHFPSVFLVVMSSSYLLRHLAISTQAFVTNTFRSLATTSAGRSARA
TTMPTPNCRPCSKRTRRGQGPREESLWLSSSALPLSFSFAGRHLSSSSTC
RHPITGEGGPTSSSSKFQTSSPRSQSEPTETRAPVSGGAGQGFGVDSGSC
AADPDTSNSAPQRRQTQSERRPKKQQQQPQPKAPPRGNNLLVVGLGNPGK
QYKFTRHNAGFLVAEELARRHGGTLKIRTAFQVDIMT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001328Pept_tRNA_hydro
IPR036416Pept_tRNA_hydro_sf
IPR018171Pept_tRNA_hydro_CS