prot_F-distichus_contig9940.19384.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig9940.19384.1
Unique Nameprot_F-distichus_contig9940.19384.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length274
Homology
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BLAST of mRNA_F-distichus_contig9940.19384.1 vs. uniprot
Match: A0A6H5L4T8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4T8_9PHAE)

HSP 1 Score: 72.8 bits (177), Expect = 6.300e-11
Identity = 71/184 (38.59%), Postives = 89/184 (48.37%), Query Frame = 0 
Query:   96 LLREKREILRELKGVIQRQSEALGRLAKGCQEPFGREACRSNQGDA----VHPGTRRACYGSNKF------GIQYTRTGCFGTLSS--KRYPSEQINTTGSRSTAESSIVTSHLPPGPPDNTTSTFLKLGGRWGVHELAVDSRRKSKTT--SASYATYCDRRWEKEKARHRAGRRPRAVPALPL 265
            LL  KR IL E+KGV+ RQ+EAL RL +           R   GD       P        S+ F        Q TR+G    +SS  K+ P+  + +  +R  AE  +     P  P DN TS FL  GGRWG        RR S TT  SASYATYC R  ++++     GRRP AVPALP+
Sbjct:  258 LLERKRGILLEMKGVVNRQAEALDRLVQSSANANVAGNGRRRGGDRNSRKSRPSQASVSTSSSLFTPNGATSGQNTRSGSCPHISSHIKKSPA-MLPSPLTRPKAELPMP----PTVPQDNGTSAFLARGGRWGGESRRRSWRRDSVTTASSASYATYCKR--DRDQGMLGIGRRPAAVPALPV 434
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig9940.19384.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L4T8_9PHAE6.300e-1138.59Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig9940contigF-distichus_contig9940:4130..4951 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig9940.19384.1mRNA_F-distichus_contig9940.19384.1Fucus distichus monoicousmRNAF-distichus_contig9940 2681..5003 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig9940.19384.1 ID=prot_F-distichus_contig9940.19384.1|Name=mRNA_F-distichus_contig9940.19384.1|organism=Fucus distichus monoicous|type=polypeptide|length=274bp
MRFMKYAYKHLDDCKASARRKSIGTKTSGIDRCDKLRRRRLHGNAAGPKP
LRKCATGSPTLARSPPRVGGARGCNTECSLREVDTVSPLDKDRPRLLREK
REILRELKGVIQRQSEALGRLAKGCQEPFGREACRSNQGDAVHPGTRRAC
YGSNKFGIQYTRTGCFGTLSSKRYPSEQINTTGSRSTAESSIVTSHLPPG
PPDNTTSTFLKLGGRWGVHELAVDSRRKSKTTSASYATYCDRRWEKEKAR
HRAGRRPRAVPALPLPLCISFTP*
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