prot_F-distichus_contig99369.19378.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig99369.19378.1
Unique Nameprot_F-distichus_contig99369.19378.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length55
Homology
BLAST of mRNA_F-distichus_contig99369.19378.1 vs. uniprot
Match: D7G3C7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3C7_ECTSI)

HSP 1 Score: 97.8 bits (242), Expect = 8.180e-23
Identity = 47/55 (85.45%), Postives = 51/55 (92.73%), Query Frame = 0
Query:    1 VYEKAIKDLNEEGAREMCVAFAKVEQKLGEIDRARAVLTHGSQFADPRRASSFWQ 55
            VYEKAIKDLNEEGAREMC++FA VEQKLGEIDRARAV T+GSQFADPRRA  +WQ
Sbjct:  105 VYEKAIKDLNEEGAREMCLSFAAVEQKLGEIDRARAVWTYGSQFADPRRAEPYWQ 159          
BLAST of mRNA_F-distichus_contig99369.19378.1 vs. uniprot
Match: A0A836CMJ5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMJ5_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 8.630e-18
Identity = 39/54 (72.22%), Postives = 46/54 (85.19%), Query Frame = 0
Query:    1 VYEKAIKDLNEEGAREMCVAFAKVEQKLGEIDRARAVLTHGSQFADPRRASSFW 54
            VYEKAI+ L E+ ARE+C+ FA++EQ LGEIDRARAVL HGSQFADPRR  S+W
Sbjct:    2 VYEKAIEALGEDDAREICMQFARLEQALGEIDRARAVLAHGSQFADPRRHDSYW 55          
BLAST of mRNA_F-distichus_contig99369.19378.1 vs. uniprot
Match: K8YQA2_NANGC (Pre-mRNA-splicing factor SYF1 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YQA2_NANGC)

HSP 1 Score: 78.2 bits (191), Expect = 1.570e-15
Identity = 35/55 (63.64%), Postives = 46/55 (83.64%), Query Frame = 0
Query:    1 VYEKAIKDLNEEGAREMCVAFAKVEQKLGEIDRARAVLTHGSQFADPRRASSFWQ 55
            VY+KAI+ L +EGA+ MC+ FA++E+KLGEIDRARAV THG+ FADPRR   +W+
Sbjct:  752 VYQKAIEVLPDEGAKNMCIQFAELERKLGEIDRARAVYTHGANFADPRRDPGYWK 806          
BLAST of mRNA_F-distichus_contig99369.19378.1 vs. uniprot
Match: A0A2J7QGD4_9NEOP (Uncharacterized protein n=1 Tax=Cryptotermes secundus TaxID=105785 RepID=A0A2J7QGD4_9NEOP)

HSP 1 Score: 76.6 bits (187), Expect = 1.750e-15
Identity = 36/55 (65.45%), Postives = 43/55 (78.18%), Query Frame = 0
Query:    1 VYEKAIKDLNEEGAREMCVAFAKVEQKLGEIDRARAVLTHGSQFADPRRASSFWQ 55
            +YEKAI+ L EE AREMC+ FA++E KLGEIDRARA+ TH SQ  DPR  + FWQ
Sbjct:   53 IYEKAIEVLTEENAREMCLRFAEMETKLGEIDRARAIYTHCSQMCDPRVTAEFWQ 107          
BLAST of mRNA_F-distichus_contig99369.19378.1 vs. uniprot
Match: A0A7S2V324_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V324_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 2.520e-15
Identity = 33/55 (60.00%), Postives = 46/55 (83.64%), Query Frame = 0
Query:    1 VYEKAIKDLNEEGAREMCVAFAKVEQKLGEIDRARAVLTHGSQFADPRRASSFWQ 55
            +YEKAI+ L +E + + C A+A++E+KLGEIDRARA+L HGSQFADPRR  ++W+
Sbjct:   13 IYEKAIEGLGDEDSCQACEAYAQLERKLGEIDRARALLVHGSQFADPRRHPAYWK 67          
BLAST of mRNA_F-distichus_contig99369.19378.1 vs. uniprot
Match: A0A6P8M466_9HYME (pre-mRNA-splicing factor syf1 homolog n=2 Tax=Hymenoptera TaxID=7399 RepID=A0A6P8M466_9HYME)

HSP 1 Score: 77.0 bits (188), Expect = 3.990e-15
Identity = 35/55 (63.64%), Postives = 44/55 (80.00%), Query Frame = 0
Query:    1 VYEKAIKDLNEEGAREMCVAFAKVEQKLGEIDRARAVLTHGSQFADPRRASSFWQ 55
            +YEKAI+ LNE+  REMC+ FA++E KLGE+DRARA+  H SQ  DPR AS+FWQ
Sbjct:  647 IYEKAIEVLNEDNTREMCLRFAEMETKLGEVDRARAIYAHCSQICDPRVASNFWQ 701          
BLAST of mRNA_F-distichus_contig99369.19378.1 vs. uniprot
Match: A0A2J7QCS1_9NEOP (Uncharacterized protein n=1 Tax=Cryptotermes secundus TaxID=105785 RepID=A0A2J7QCS1_9NEOP)

HSP 1 Score: 73.9 bits (180), Expect = 4.470e-15
Identity = 35/55 (63.64%), Postives = 42/55 (76.36%), Query Frame = 0
Query:    1 VYEKAIKDLNEEGAREMCVAFAKVEQKLGEIDRARAVLTHGSQFADPRRASSFWQ 55
            +YEKAI+ L EE AREMC+ FAK+E KLGEIDRARA+  + SQ  DPR  + FWQ
Sbjct:   44 IYEKAIEVLTEENAREMCLRFAKMETKLGEIDRARAIYAYCSQMCDPRVTAEFWQ 98          
BLAST of mRNA_F-distichus_contig99369.19378.1 vs. uniprot
Match: UPI00138FF995 (LOW QUALITY PROTEIN: pre-mRNA-splicing factor SYF1 n=1 Tax=Nematostella vectensis TaxID=45351 RepID=UPI00138FF995)

HSP 1 Score: 76.6 bits (187), Expect = 5.460e-15
Identity = 35/55 (63.64%), Postives = 45/55 (81.82%), Query Frame = 0
Query:    1 VYEKAIKDLNEEGAREMCVAFAKVEQKLGEIDRARAVLTHGSQFADPRRASSFWQ 55
            +YEKAI+ L ++ AREMC+ FA++E+KLGEIDRARAV  H SQ +DPRR  SFW+
Sbjct:  650 IYEKAIEVLPDDDAREMCIRFAELERKLGEIDRARAVYMHASQISDPRRTPSFWK 704          
BLAST of mRNA_F-distichus_contig99369.19378.1 vs. uniprot
Match: C3Z7Y5_BRAFL (Uncharacterized protein n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3Z7Y5_BRAFL)

HSP 1 Score: 75.9 bits (185), Expect = 1.010e-14
Identity = 37/55 (67.27%), Postives = 43/55 (78.18%), Query Frame = 0
Query:    1 VYEKAIKDLNEEGAREMCVAFAKVEQKLGEIDRARAVLTHGSQFADPRRASSFWQ 55
            +YEKAI+ L EE AREMC+ FA +E+KLGEIDRARAV  H SQ  DPR  +SFWQ
Sbjct:  304 IYEKAIEMLPEEHAREMCLRFADLEKKLGEIDRARAVYAHCSQMCDPRTTASFWQ 358          
BLAST of mRNA_F-distichus_contig99369.19378.1 vs. uniprot
Match: A0A0J7KPA6_LASNI (Pre-mrna-splicing factor syf1-like protein n=2 Tax=Formicidae TaxID=36668 RepID=A0A0J7KPA6_LASNI)

HSP 1 Score: 75.9 bits (185), Expect = 1.020e-14
Identity = 35/55 (63.64%), Postives = 43/55 (78.18%), Query Frame = 0
Query:    1 VYEKAIKDLNEEGAREMCVAFAKVEQKLGEIDRARAVLTHGSQFADPRRASSFWQ 55
            +YEKAI+ LN+E  REMC+ FA++E KLGE+DRARAV  H SQ  DPR  S+FWQ
Sbjct:  494 IYEKAIEVLNDENTREMCLRFAEMETKLGEVDRARAVYAHCSQICDPRVTSNFWQ 548          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig99369.19378.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3C7_ECTSI8.180e-2385.45Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CMJ5_9STRA8.630e-1872.22Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
K8YQA2_NANGC1.570e-1563.64Pre-mRNA-splicing factor SYF1 n=3 Tax=Monodopsidac... [more]
A0A2J7QGD4_9NEOP1.750e-1565.45Uncharacterized protein n=1 Tax=Cryptotermes secun... [more]
A0A7S2V324_9STRA2.520e-1560.00Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A6P8M466_9HYME3.990e-1563.64pre-mRNA-splicing factor syf1 homolog n=2 Tax=Hyme... [more]
A0A2J7QCS1_9NEOP4.470e-1563.64Uncharacterized protein n=1 Tax=Cryptotermes secun... [more]
UPI00138FF9955.460e-1563.64LOW QUALITY PROTEIN: pre-mRNA-splicing factor SYF1... [more]
C3Z7Y5_BRAFL1.010e-1467.27Uncharacterized protein n=1 Tax=Branchiostoma flor... [more]
A0A0J7KPA6_LASNI1.020e-1463.64Pre-mrna-splicing factor syf1-like protein n=2 Tax... [more]

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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11246PRE-MRNA SPLICING FACTORcoord: 1..55
NoneNo IPR availablePANTHERPTHR11246:SF5PRE-MRNA-SPLICING FACTOR SYF1coord: 1..55

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR11246PRE-MRNA SPLICING FACTORcoord: 1..55
NoneNo IPR availablePANTHERPTHR11246:SF5PRE-MRNA-SPLICING FACTOR SYF1coord: 1..55

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig99369contigF-distichus_contig99369:788..1903 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig99369.19378.1mRNA_F-distichus_contig99369.19378.1Fucus distichus monoicousmRNAF-distichus_contig99369 788..1903 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig99369.19378.1 ID=prot_F-distichus_contig99369.19378.1|Name=mRNA_F-distichus_contig99369.19378.1|organism=Fucus distichus monoicous|type=polypeptide|length=55bp
VYEKAIKDLNEEGAREMCVAFAKVEQKLGEIDRARAVLTHGSQFADPRRA
SSFWQ
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