prot_F-distichus_contig99300.19372.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig99300.19372.1
Unique Nameprot_F-distichus_contig99300.19372.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length95
Homology
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BLAST of mRNA_F-distichus_contig99300.19372.1 vs. uniprot
Match: A0A6H5KKB4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKB4_9PHAE)

HSP 1 Score: 84.3 bits (207), Expect = 1.290e-17
Identity = 45/96 (46.88%), Postives = 57/96 (59.38%), Query Frame = 0 
Query:    1 MKHSSLGGNNYVVIFVDDCTRFKAVKFVKKKSDTTASLMSLVADYITRQ-KLSIKCIRTDNGGECEGEFQRELDRRSIANEHTPPDTPQYNGVAER 95
            M+  S+GGN Y +I  DDCTR+  V F+K KSD  A+    +ADY        +   RTD GGE +G+F     R  I  E TPP+TP+YNGVAER
Sbjct:    1 MQFKSIGGNWYTLIIRDDCTRWTRVFFLKHKSDAAAAFEPYLADYRAETVPCEVFVARTDGGGEFQGQFAEVCRRYGIKQEFTPPNTPKYNGVAER 96
[Close]
BLAST of mRNA_F-distichus_contig99300.19372.1 vs. uniprot
Match: A0A6H5LL52_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL52_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 2.140e-17
Identity = 45/96 (46.88%), Postives = 57/96 (59.38%), Query Frame = 0 
Query:    1 MKHSSLGGNNYVVIFVDDCTRFKAVKFVKKKSDTTASLMSLVADYITRQ-KLSIKCIRTDNGGECEGEFQRELDRRSIANEHTPPDTPQYNGVAER 95
            M+  S+GGN Y +I  DDCTR+  V F+K KSD  A+    +ADY        +   RTD GGE +G+F     R  I  E TPP+TP+YNGVAER
Sbjct:  205 MQFKSIGGNWYTLIIRDDCTRWTRVFFLKHKSDAAAAFEQYLADYRAETVPCEVFVARTDGGGEFQGQFAEVCRRSGIKQEFTPPNTPKYNGVAER 300
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BLAST of mRNA_F-distichus_contig99300.19372.1 vs. uniprot
Match: A0A2N9FP48_FAGSY (Integrase catalytic domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9FP48_FAGSY)

HSP 1 Score: 74.3 bits (181), Expect = 1.840e-13
Identity = 44/93 (47.31%), Postives = 54/93 (58.06%), Query Frame = 0 
Query:    5 SLGGNNYVVIFVDDCTRFKAVKFVKKKSDTTASLMSLVADYITRQK-LSIKCIRTDNGGE-CEGEFQRELDRRSIANEHTPPDTPQYNGVAER 95
            SLGGN Y V F+DD +R K   +V K  D    L       + RQK  S+KC+RTDNGGE    EF+       I +E T PDTPQ+NGVA+R
Sbjct:  290 SLGGNRYFVTFIDDASR-KVWVYVLKTKDQVFQLFKKFHAMVERQKGKSLKCLRTDNGGEYTSNEFENYCSEYGIRHEKTVPDTPQHNGVAKR 381
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BLAST of mRNA_F-distichus_contig99300.19372.1 vs. uniprot
Match: A0A2N9FLT3_FAGSY (Integrase catalytic domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9FLT3_FAGSY)

HSP 1 Score: 73.2 bits (178), Expect = 4.640e-13
Identity = 44/93 (47.31%), Postives = 53/93 (56.99%), Query Frame = 0 
Query:    5 SLGGNNYVVIFVDDCTRFKAVKFVKKKSDTTASLMSLVADYITRQK-LSIKCIRTDNGGE-CEGEFQRELDRRSIANEHTPPDTPQYNGVAER 95
            SLGGN Y V F+DD +R K   +V K  D    L       + RQK  S+KC+RTDNGGE    EF+       I +E T P TPQ+NGVAER
Sbjct:  176 SLGGNRYFVTFIDDASR-KVWVYVLKTKDQVFQLFKKFHAMVERQKGKSLKCLRTDNGGEYTSNEFENYCSEYGIRHEKTVPGTPQHNGVAER 267
[Close]
BLAST of mRNA_F-distichus_contig99300.19372.1 vs. uniprot
Match: A0A8J6D0F7_9ROSI (Integrase catalytic domain-containing protein n=1 Tax=Gossypium anomalum TaxID=47600 RepID=A0A8J6D0F7_9ROSI)

HSP 1 Score: 72.8 bits (177), Expect = 6.440e-13
Identity = 41/96 (42.71%), Postives = 53/96 (55.21%), Query Frame = 0 
Query:    1 MKHSSLGGNNYVVIFVDDCTRFKAVKFVKKKSDTTASLMSLVADYITRQKLSIKCIRTDNGGECEGE-FQRELDRRSIANEHTPPDTPQYNGVAER 95
            MK +SL G+ Y  +F+DDCTRF  V F+K+KSD         A    +    +KCIR+DNG E   + FQ   D   I ++ T   TPQ NGV ER
Sbjct:  490 MKTTSLNGSRYFALFIDDCTRFCWVSFLKQKSDVVGFFCKFKALAKNQASCKLKCIRSDNGTEYVSQRFQNICDEAGIQHQLTTIYTPQQNGVCER 585
[Close]
BLAST of mRNA_F-distichus_contig99300.19372.1 vs. uniprot
Match: A0A2N9GSR4_FAGSY (Integrase catalytic domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GSR4_FAGSY)

HSP 1 Score: 72.0 bits (175), Expect = 1.190e-12
Identity = 43/93 (46.24%), Postives = 53/93 (56.99%), Query Frame = 0 
Query:    5 SLGGNNYVVIFVDDCTRFKAVKFVKKKSDTTASLMSLVADYITRQK-LSIKCIRTDNGGE-CEGEFQRELDRRSIANEHTPPDTPQYNGVAER 95
            SLGGN Y V F+DD +R K   +V K  D    L       + R+K  S+KC+RTDNGGE    EF+       I +E T P TPQ+NGVAER
Sbjct:  131 SLGGNRYFVTFIDDASR-KVWVYVLKTKDQVFQLFKKFHAMVEREKGKSLKCLRTDNGGEYTSNEFENYCSEYGIRHEKTVPGTPQHNGVAER 222
[Close]
BLAST of mRNA_F-distichus_contig99300.19372.1 vs. uniprot
Match: A0A2N9EW40_FAGSY (Integrase catalytic domain-containing protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9EW40_FAGSY)

HSP 1 Score: 72.0 bits (175), Expect = 1.200e-12
Identity = 43/93 (46.24%), Postives = 53/93 (56.99%), Query Frame = 0 
Query:    5 SLGGNNYVVIFVDDCTRFKAVKFVKKKSDTTASLMSLVADYITRQK-LSIKCIRTDNGGE-CEGEFQRELDRRSIANEHTPPDTPQYNGVAER 95
            SLGGN Y V F+DD +R K   +V K  D    L       + R+K  S+KC+RTDNGGE    EF+       I +E T P TPQ+NGVAER
Sbjct:  386 SLGGNRYFVTFIDDASR-KVWVYVLKTKDQVFQLFKKFHAMVEREKGKSLKCLRTDNGGEYTSNEFENYCSEYGIRHEKTVPGTPQHNGVAER 477
[Close]
BLAST of mRNA_F-distichus_contig99300.19372.1 vs. uniprot
Match: A0A2N9IAD6_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9IAD6_FAGSY)

HSP 1 Score: 72.0 bits (175), Expect = 1.200e-12
Identity = 43/93 (46.24%), Postives = 53/93 (56.99%), Query Frame = 0 
Query:    5 SLGGNNYVVIFVDDCTRFKAVKFVKKKSDTTASLMSLVADYITRQK-LSIKCIRTDNGGE-CEGEFQRELDRRSIANEHTPPDTPQYNGVAER 95
            SLGGN Y V F+DD +R K   +V K  D    L       + R+K  S+KC+RTDNGGE    EF+       I +E T P TPQ+NGVAER
Sbjct:  438 SLGGNRYFVTFIDDASR-KVWVYVLKTKDQVFQLFKKFHAMVEREKGKSLKCLRTDNGGEYTSNEFENYCSEYGIRHEKTVPGTPQHNGVAER 529
[Close]
BLAST of mRNA_F-distichus_contig99300.19372.1 vs. uniprot
Match: A0A2N9IWX1_FAGSY (Uncharacterized protein n=7 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9IWX1_FAGSY)

HSP 1 Score: 72.0 bits (175), Expect = 1.210e-12
Identity = 43/93 (46.24%), Postives = 53/93 (56.99%), Query Frame = 0 
Query:    5 SLGGNNYVVIFVDDCTRFKAVKFVKKKSDTTASLMSLVADYITRQK-LSIKCIRTDNGGE-CEGEFQRELDRRSIANEHTPPDTPQYNGVAER 95
            SLGGN Y V F+DD +R K   +V K  D    L       + R+K  S+KC+RTDNGGE    EF+       I +E T P TPQ+NGVAER
Sbjct:  473 SLGGNRYFVTFIDDASR-KVWVYVLKTKDQVFQLFKKFHAMVEREKGKSLKCLRTDNGGEYTSNEFENYCSEYGIRHEKTVPGTPQHNGVAER 564
[Close]
BLAST of mRNA_F-distichus_contig99300.19372.1 vs. uniprot
Match: A0A2N9FZK6_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9FZK6_FAGSY)

HSP 1 Score: 72.0 bits (175), Expect = 1.220e-12
Identity = 43/93 (46.24%), Postives = 53/93 (56.99%), Query Frame = 0 
Query:    5 SLGGNNYVVIFVDDCTRFKAVKFVKKKSDTTASLMSLVADYITRQK-LSIKCIRTDNGGE-CEGEFQRELDRRSIANEHTPPDTPQYNGVAER 95
            SLGGN Y V F+DD +R K   +V K  D    L       + R+K  S+KC+RTDNGGE    EF+       I +E T P TPQ+NGVAER
Sbjct:  751 SLGGNRYFVTFIDDASR-KVWVYVLKTKDQVFQLFKKFHAMVEREKGKSLKCLRTDNGGEYTSNEFENYCSEYGIRHEKTVPGTPQHNGVAER 842
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig99300.19372.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KKB4_9PHAE1.290e-1746.88Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5LL52_9PHAE2.140e-1746.88Integrase catalytic domain-containing protein n=1 ... [more]
A0A2N9FP48_FAGSY1.840e-1347.31Integrase catalytic domain-containing protein n=1 ... [more]
A0A2N9FLT3_FAGSY4.640e-1347.31Integrase catalytic domain-containing protein n=1 ... [more]
A0A8J6D0F7_9ROSI6.440e-1342.71Integrase catalytic domain-containing protein n=1 ... [more]
A0A2N9GSR4_FAGSY1.190e-1246.24Integrase catalytic domain-containing protein n=1 ... [more]
A0A2N9EW40_FAGSY1.200e-1246.24Integrase catalytic domain-containing protein n=1 ... [more]
A0A2N9IAD6_FAGSY1.200e-1246.24Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]
A0A2N9IWX1_FAGSY1.210e-1246.24Uncharacterized protein n=7 Tax=Fagus sylvatica Ta... [more]
A0A2N9FZK6_FAGSY1.220e-1246.24Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]

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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 6..95
e-value: 1.2E-10
score: 41.6
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 1..95
score: 11.987
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..95
e-value: 2.7E-13
score: 51.6
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 5..95

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 6..95
e-value: 1.2E-10
score: 41.6
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 1..95
score: 11.987
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 1..95
e-value: 2.7E-13
score: 51.6
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 5..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig99300contigF-distichus_contig99300:1759..2043 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig99300.19372.1mRNA_F-distichus_contig99300.19372.1Fucus distichus monoicousmRNAF-distichus_contig99300 1744..2043 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig99300.19372.1 ID=prot_F-distichus_contig99300.19372.1|Name=mRNA_F-distichus_contig99300.19372.1|organism=Fucus distichus monoicous|type=polypeptide|length=95bp
MKHSSLGGNNYVVIFVDDCTRFKAVKFVKKKSDTTASLMSLVADYITRQK
LSIKCIRTDNGGECEGEFQRELDRRSIANEHTPPDTPQYNGVAER
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001584Integrase_cat-core
IPR036397RNaseH_sf
IPR012337RNaseH-like_sf