prot_F-distichus_contig99168.19356.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig99168.19356.1
Unique Nameprot_F-distichus_contig99168.19356.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length212
Homology
BLAST of mRNA_F-distichus_contig99168.19356.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE)

HSP 1 Score: 124 bits (310), Expect = 5.030e-29
Identity = 72/204 (35.29%), Postives = 114/204 (55.88%), Query Frame = 0
Query:    6 AGVKEELYIELPEDYRDSYDQVGRLQKAMYGFVHARFLWLKTFSAELAARGFEQCQADSCVFGRALRGKVVVIIVVHVDDLLVASETKRNEEQAINNLRSCFPIKGLGKAGLYLGCHITPDRDAGTLKLDQHRYVRSMASNFNAEKTSTTPATVGEKPLSKDDAPQTEAETEDMRVTPYREAVWALIWAATMTRHDVTYGAHQL 209
            A + EE++++LP    D   ++ + ++A+YG   +   W    +  L   GFEQC+AD CVF + +   VV+IIV++VDD+LVA   +  EE  + +L   FP K LG+   + GC I  D +AGTL++ Q  Y+ SM   F+ + TS  PAT G      D  P+   E E+    P REA+ +++W +T +R DV++    +
Sbjct:  857 ATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEE-LLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGA-----DLGPK--REDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAV 1052          
BLAST of mRNA_F-distichus_contig99168.19356.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE)

HSP 1 Score: 124 bits (310), Expect = 5.180e-29
Identity = 72/204 (35.29%), Postives = 114/204 (55.88%), Query Frame = 0
Query:    6 AGVKEELYIELPEDYRDSYDQVGRLQKAMYGFVHARFLWLKTFSAELAARGFEQCQADSCVFGRALRGKVVVIIVVHVDDLLVASETKRNEEQAINNLRSCFPIKGLGKAGLYLGCHITPDRDAGTLKLDQHRYVRSMASNFNAEKTSTTPATVGEKPLSKDDAPQTEAETEDMRVTPYREAVWALIWAATMTRHDVTYGAHQL 209
            A + EE++++LP    D   ++ + ++A+YG   +   W    +  L   GFEQC+AD CVF + +   VV+IIV++VDD+LVA   +  EE  + +L   FP K LG+   + GC I  D +AGTL++ Q  Y+ SM   F+ + TS  PAT G      D  P+   E E+    P REA+ +++W +T +R DV++    +
Sbjct: 1236 ATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEE-LLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGA-----DLGPK--REDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAV 1431          
BLAST of mRNA_F-distichus_contig99168.19356.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE)

HSP 1 Score: 124 bits (310), Expect = 5.200e-29
Identity = 72/204 (35.29%), Postives = 114/204 (55.88%), Query Frame = 0
Query:    6 AGVKEELYIELPEDYRDSYDQVGRLQKAMYGFVHARFLWLKTFSAELAARGFEQCQADSCVFGRALRGKVVVIIVVHVDDLLVASETKRNEEQAINNLRSCFPIKGLGKAGLYLGCHITPDRDAGTLKLDQHRYVRSMASNFNAEKTSTTPATVGEKPLSKDDAPQTEAETEDMRVTPYREAVWALIWAATMTRHDVTYGAHQL 209
            A + EE++++LP    D   ++ + ++A+YG   +   W    +  L   GFEQC+AD CVF + +   VV+IIV++VDD+LVA   +  EE  + +L   FP K LG+   + GC I  D +AGTL++ Q  Y+ SM   F+ + TS  PAT G      D  P+   E E+    P REA+ +++W +T +R DV++    +
Sbjct: 1256 ATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSDEDCEE-LLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGA-----DLGPK--REDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAV 1451          
BLAST of mRNA_F-distichus_contig99168.19356.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE)

HSP 1 Score: 124 bits (310), Expect = 5.230e-29
Identity = 72/204 (35.29%), Postives = 114/204 (55.88%), Query Frame = 0
Query:    6 AGVKEELYIELPEDYRDSYDQVGRLQKAMYGFVHARFLWLKTFSAELAARGFEQCQADSCVFGRALRGKVVVIIVVHVDDLLVASETKRNEEQAINNLRSCFPIKGLGKAGLYLGCHITPDRDAGTLKLDQHRYVRSMASNFNAEKTSTTPATVGEKPLSKDDAPQTEAETEDMRVTPYREAVWALIWAATMTRHDVTYGAHQL 209
            A + EE++++LP    D   ++ + ++A+YG   +   W    +  L   GFEQC+AD CVF + +   VV+IIV++VDD+LVA   +  EE  + +L   FP K LG+   + GC I  D +AGTL++ Q  Y+ SM   F+ + TS  PAT G      D  P+   E E+    P REA+ +++W +T +R DV++    +
Sbjct: 1399 ATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEE-LLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGA-----DLGPK--REDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAV 1594          
BLAST of mRNA_F-distichus_contig99168.19356.1 vs. uniprot
Match: A0A6H5JQN6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQN6_9PHAE)

HSP 1 Score: 123 bits (309), Expect = 6.380e-29
Identity = 73/204 (35.78%), Postives = 113/204 (55.39%), Query Frame = 0
Query:    6 AGVKEELYIELPEDYRDSYDQVGRLQKAMYGFVHARFLWLKTFSAELAARGFEQCQADSCVFGRALRGKVVVIIVVHVDDLLVASETKRNEEQAINNLRSCFPIKGLGKAGLYLGCHITPDRDAGTLKLDQHRYVRSMASNFNAEKTSTTPATVGEKPLSKDDAPQTEAETEDMRVTPYREAVWALIWAATMTRHDVTYGAHQL 209
            A + EE++++LP    D   ++ + ++A+YG   +   W    +  L   GFEQC+AD CVF + +   VV+IIV++VDD+LVA   +  EE  + +L   FP K LG+   + GC I  D DAGTL++ Q  Y+ SM   F+ + TS  PAT G      D  P+   E +     P REAV +++W +T +R DV++    +
Sbjct:  448 ATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEE-LLASLNKKFPTKNLGECQWFDGCAIERDVDAGTLRISQTAYIDSMVERFDVKSTSRIPATPGA-----DLGPK--REDDKGGEWPVREAVGSMMWVSTFSRPDVSFAVRAV 643          
BLAST of mRNA_F-distichus_contig99168.19356.1 vs. uniprot
Match: A0A6H5JQW4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQW4_9PHAE)

HSP 1 Score: 122 bits (305), Expect = 2.350e-28
Identity = 73/204 (35.78%), Postives = 113/204 (55.39%), Query Frame = 0
Query:    6 AGVKEELYIELPEDYRDSYDQVGRLQKAMYGFVHARFLWLKTFSAELAARGFEQCQADSCVFGRALRGKVVVIIVVHVDDLLVASETKRNEEQAINNLRSCFPIKGLGKAGLYLGCHITPDRDAGTLKLDQHRYVRSMASNFNAEKTSTTPATVGEKPLSKDDAPQTEAETEDMRVTPYREAVWALIWAATMTRHDVTYGAHQL 209
            A + EE++  LP    D   Q+ + ++A+YG   +   W    +  L   GFEQC+AD CVF + +   VV+IIV++VDD+LVA   +  EE  + +L   FP K LG+   + GC I  D +AGTL++ Q  Y+ SM   F+ + TS  PAT G      D  P+   E E+    P R+A+ +++W +T +R DV++ A  +
Sbjct:  966 ATLDEEVFPRLPAGCGDKSHQIVKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEE-LLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGA-----DLGPK--REDEEGGEWPVRKAIGSMMWVSTFSRPDVSFAARAV 1161          
BLAST of mRNA_F-distichus_contig99168.19356.1 vs. uniprot
Match: A0A6H5K616_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K616_9PHAE)

HSP 1 Score: 116 bits (290), Expect = 1.300e-27
Identity = 70/200 (35.00%), Postives = 107/200 (53.50%), Query Frame = 0
Query:   10 EELYIELPEDYRDSYDQVGRLQKAMYGFVHARFLWLKTFSAELAARGFEQCQADSCVFGRALRGKVVVIIVVHVDDLLVASETKRNEEQAINNLRSCFPIKGLGKAGLYLGCHITPDRDAGTLKLDQHRYVRSMASNFNAEKTSTTPATVGEKPLSKDDAPQTEAETEDMRVTPYREAVWALIWAATMTRHDVTYGAHQL 209
            EE+++ LP    D   +V   ++A+YG   +   W    +  L   GFEQC+AD+CVF +     VV+IIV++VDD+LVA   +  EE  + +L   FP K LG+   + GC I    +AGTL++ Q  Y+ SM   F A+ TS  PA+ G     K D        E+    P REA+ +++W +T +R DV++    +
Sbjct:   42 EEVFLRLPAGCGDKSHKVVNAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADTCVFRKMADEVVVMIIVIYVDDILVAGSDEDCEE-LLASLNKKFPTKNLGECEWFDGCAIERGVEAGTLRISQTAYIDSMVKRFEAQSTSLIPASPGVDLGPKRD-------DENGGEWPVREAIGSMMWVSTFSRPDVSFAVRAV 233          
BLAST of mRNA_F-distichus_contig99168.19356.1 vs. uniprot
Match: A0A6H5K164_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K164_9PHAE)

HSP 1 Score: 119 bits (297), Expect = 2.420e-27
Identity = 71/199 (35.68%), Postives = 109/199 (54.77%), Query Frame = 0
Query:   11 ELYIELPEDYRDSYDQVGRLQKAMYGFVHARFLWLKTFSAELAARGFEQCQADSCVFGRALRGKVVVIIVVHVDDLLVASETKRNEEQAINNLRSCFPIKGLGKAGLYLGCHITPDRDAGTLKLDQHRYVRSMASNFNAEKTSTTPATVGEKPLSKDDAPQTEAETEDMRVTPYREAVWALIWAATMTRHDVTYGAHQL 209
            E+++ LP    D   +  + ++A+YG   +   W    +  L   GFEQC+AD CVF + +   VV+IIV++VDD+LVA   +  EE  + +L   FP K LG+   + GC I  D DAGTL++ Q  Y+ SM   F+ + TS  PAT G      D  P+   E E+    P REA+ +++W +T +R DV++    +
Sbjct:  497 EVFLRLPAGCGDKSRKTLKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEE-LLASLNKKFPTKNLGECQWFDGCAIERDVDAGTLRISQTAYIDSMVERFDVKSTSRIPATPGA-----DLGPK--REDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAV 687          
BLAST of mRNA_F-distichus_contig99168.19356.1 vs. uniprot
Match: A0A6H5K1N9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1N9_9PHAE)

HSP 1 Score: 119 bits (297), Expect = 2.720e-27
Identity = 70/200 (35.00%), Postives = 111/200 (55.50%), Query Frame = 0
Query:   10 EELYIELPEDYRDSYDQVGRLQKAMYGFVHARFLWLKTFSAELAARGFEQCQADSCVFGRALRGKVVVIIVVHVDDLLVASETKRNEEQAINNLRSCFPIKGLGKAGLYLGCHITPDRDAGTLKLDQHRYVRSMASNFNAEKTSTTPATVGEKPLSKDDAPQTEAETEDMRVTPYREAVWALIWAATMTRHDVTYGAHQL 209
            EE+++ LP        ++ + ++A+YG   +   W    +  L   GFEQC+AD CVF + +   VV+II+++VDD+LVA   +  EE  + +L   FP K LG+   + GC I  D +AGTL++ Q  Y+ SM + F+ + TS  PAT G      D  P  E E E+    P REA+ +++W +T +R DV++    +
Sbjct:  894 EEVFLRLPAGCGYKSHKIVKAERAIYGLKQSGRQWGYHVADTLVENGFEQCKADPCVFRKMVDEVVVMIIMIYVDDILVAGSDEDCEE-LLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVARFDVQSTSRIPATPGA-----DLGP--EREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAV 1085          
BLAST of mRNA_F-distichus_contig99168.19356.1 vs. uniprot
Match: A0A6H5K1V1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1V1_9PHAE)

HSP 1 Score: 118 bits (295), Expect = 4.790e-27
Identity = 70/199 (35.18%), Postives = 106/199 (53.27%), Query Frame = 0
Query:    6 AGVKEELYIELPEDYRDSYDQVGRLQKAMYGFVHARFLWLKTFSAELAARGFEQCQADSCVFGRALRGKVVVIIVVHVDDLLVASETKRNEEQAINNLRSCFPIKGLGKAGLYLGCHITPDRDAGTLKLDQHRYVRSMASNFNAEKTSTTPATVGEKPLSKDDAPQTEAETEDMRVTPYREAVWALIWAATMTRHDVTY 204
            A + EE++++LP    D   ++ + ++A+YG   +   W    +  L   GFEQC+AD CVF + +   VV+IIV+HVDD+LVA   +  EE  + +    FP K LG+   + GC I  D DAG LK+ Q  Y+ SM   F+ + TS  PA+ G     K D        E     P RE + +++W +T +R DV +
Sbjct:  427 ATLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIHVDDILVAGSDEDCEE-LLASFNKRFPSKNLGECEWFDGCAIERDVDAGALKISQTAYIDSMVKRFDVQWTSRIPASPGVDLGPKRD-------DEKAGEWPVRETIGSMMWVSTFSRPDVLF 617          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig99168.19356.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KSG8_9PHAE5.030e-2935.29Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JZQ8_9PHAE5.180e-2935.29Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN00_9PHAE5.200e-2935.29Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KF60_9PHAE5.230e-2935.29Uncharacterized protein n=12 Tax=Ectocarpus sp. CC... [more]
A0A6H5JQN6_9PHAE6.380e-2935.78Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JQW4_9PHAE2.350e-2835.78Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K616_9PHAE1.300e-2735.00Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K164_9PHAE2.420e-2735.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K1N9_9PHAE2.720e-2735.00Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5K1V1_9PHAE4.790e-2735.18Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 2..154
e-value: 5.1E-22
score: 78.7

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 2..154
e-value: 5.1E-22
score: 78.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig99168contigF-distichus_contig99168:197..832 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig99168.19356.1mRNA_F-distichus_contig99168.19356.1Fucus distichus monoicousmRNAF-distichus_contig99168 185..832 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig99168.19356.1 ID=prot_F-distichus_contig99168.19356.1|Name=mRNA_F-distichus_contig99168.19356.1|organism=Fucus distichus monoicous|type=polypeptide|length=212bp
MACLKAGVKEELYIELPEDYRDSYDQVGRLQKAMYGFVHARFLWLKTFSA
ELAARGFEQCQADSCVFGRALRGKVVVIIVVHVDDLLVASETKRNEEQAI
NNLRSCFPIKGLGKAGLYLGCHITPDRDAGTLKLDQHRYVRSMASNFNAE
KTSTTPATVGEKPLSKDDAPQTEAETEDMRVTPYREAVWALIWAATMTRH
DVTYGAHQLGIF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2