prot_F-distichus_contig9875.19314.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig9875.19314.1
Unique Nameprot_F-distichus_contig9875.19314.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length291
Homology
BLAST of mRNA_F-distichus_contig9875.19314.1 vs. uniprot
Match: D7G928_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G928_ECTSI)

HSP 1 Score: 156 bits (394), Expect = 3.860e-41
Identity = 127/313 (40.58%), Postives = 159/313 (50.80%), Query Frame = 0
Query:    1 SGENHNKRQDLLLREGLNKPKKSSLLGIGTADLLSAGAEDAFSKAIYDPAKLCGREGLVEISIPGRYSPRKIA----AKSFQGSDRWPF------------SSVAEMGNVFRVVPNGINGYSHTLPYRTGAAVHGIAPPKRLSGLKSAPTLRQRQKAPDLLSPATGQ-LSQDGNSGSSRSGSGNTLNTGEQSKTSRLASVDEVQVLPGATVEGGCFDDGRHGFDKSGRGKGWRSSSSQPEFDTIRTSSASARVGGPATRAFLKTSAS-DGCLITTRLP-------STLVRTATPAQRRDANQLALDFAAVRSL 288
            SG+NH++RQDLL REGLNKPKKS+LLG+GTADL SAGA D FSK+IYDPAK C  EGLVE   PGRY+PRK+     A +    D  P             SS   +  VFRVVPNG+  +S T+  R GA V GIAP KRL G +S PT+R  +   ++    TG  L +     S   G G+  +TG   +  R A     + L  AT   G    G  G          R             +   AR     T  F+K +AS + C  T R P       + L R  +PA+RR  +QL LD A +RSL
Sbjct:  114 SGKNHDERQDLLQREGLNKPKKSTLLGVGTADLASAGANDMFSKSIYDPAKTCAVEGLVETCFPGRYTPRKVTSARRAAAASRDDTPPLRQGQEKSGQRSCSSPGALDTVFRVVPNGLGNHS-TVGGRGGATVAGIAPCKRLCGSRSTPTIRSPENKAEV---GTGTPLRKSSPMRSPSPGGGSRRHTGSGGEGGRGAGSVFAERLLSATS--GSARRGSRGLT--------RXXXXXXXXXXXXXTQGVARATTAGTEGFVKKTASPEDC--TRRSPGEGGPGSARLSRGQSPAERRSNDQLTLDLATIRSL 410          
BLAST of mRNA_F-distichus_contig9875.19314.1 vs. uniprot
Match: A0A7S4DG49_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DG49_HETAK)

HSP 1 Score: 63.5 bits (153), Expect = 1.130e-8
Identity = 33/69 (47.83%), Postives = 46/69 (66.67%), Query Frame = 0
Query:    1 SGENHNKRQDLLLREGLNKPKKSSLLGIGTADLLSAGAEDAFSKAIYDPAKLCGREGLVEISIPGRYSP 69
            SGE H++RQD+L+REGL  PK+SS+LG G  D+ S G ED  +K+ Y P +    EG  E +  GR++P
Sbjct:   43 SGEQHDRRQDVLVREGLVAPKQSSVLGYGRRDVYSYGVEDQLAKSNYCPQEKIKVEGHFERNRGGRWTP 111          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig9875.19314.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G928_ECTSI3.860e-4140.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S4DG49_HETAK1.130e-847.83Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig9875contigF-distichus_contig9875:10188..11060 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig9875.19314.1mRNA_F-distichus_contig9875.19314.1Fucus distichus monoicousmRNAF-distichus_contig9875 10188..11060 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig9875.19314.1 ID=prot_F-distichus_contig9875.19314.1|Name=mRNA_F-distichus_contig9875.19314.1|organism=Fucus distichus monoicous|type=polypeptide|length=291bp
SGENHNKRQDLLLREGLNKPKKSSLLGIGTADLLSAGAEDAFSKAIYDPA
KLCGREGLVEISIPGRYSPRKIAAKSFQGSDRWPFSSVAEMGNVFRVVPN
GINGYSHTLPYRTGAAVHGIAPPKRLSGLKSAPTLRQRQKAPDLLSPATG
QLSQDGNSGSSRSGSGNTLNTGEQSKTSRLASVDEVQVLPGATVEGGCFD
DGRHGFDKSGRGKGWRSSSSQPEFDTIRTSSASARVGGPATRAFLKTSAS
DGCLITTRLPSTLVRTATPAQRRDANQLALDFAAVRSLDL*
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