prot_F-distichus_contig9873.19311.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig9873.19311.1
Unique Nameprot_F-distichus_contig9873.19311.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length69
Homology
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BLAST of mRNA_F-distichus_contig9873.19311.1 vs. uniprot
Match: D8LPS0_ECTSI (Hypothetical leucine rich repeat calmodulin binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPS0_ECTSI)

HSP 1 Score: 83.2 bits (204), Expect = 4.980e-17
Identity = 38/68 (55.88%), Postives = 56/68 (82.35%), Query Frame = 0 
Query:    1 MGSHIDAMGLSDAVRGVNSAGVAQFDPVSMVAWRQNQALDRLKTEKFERFKEYFTEKEGLSRLDVTGA 68
            +G HIDAMGL+ A +G++ +GVAQFD  SMVAWR+ Q L+R+K+E+ ER ++ FT++EGL+ LD++GA
Sbjct:   13 VGCHIDAMGLTAAFKGMDPSGVAQFDASSMVAWREKQTLERMKSEEIERAQDRFTDQEGLTSLDISGA 80
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig9873.19311.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LPS0_ECTSI4.980e-1755.88Hypothetical leucine rich repeat calmodulin bindin... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig9873contigF-distichus_contig9873:1854..2335 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig9873.19311.1mRNA_F-distichus_contig9873.19311.1Fucus distichus monoicousmRNAF-distichus_contig9873 3..2338 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig9873.19311.1 ID=prot_F-distichus_contig9873.19311.1|Name=mRNA_F-distichus_contig9873.19311.1|organism=Fucus distichus monoicous|type=polypeptide|length=69bp
MGSHIDAMGLSDAVRGVNSAGVAQFDPVSMVAWRQNQALDRLKTEKFERF
KEYFTEKEGLSRLDVTGA*
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