prot_F-distichus_contig98566.19295.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig98566.19295.1
Unique Nameprot_F-distichus_contig98566.19295.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length57
Homology
BLAST of mRNA_F-distichus_contig98566.19295.1 vs. uniprot
Match: D7FUP7_ECTSI (DNA topoisomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUP7_ECTSI)

HSP 1 Score: 103 bits (258), Expect = 1.470e-24
Identity = 45/52 (86.54%), Postives = 48/52 (92.31%), Query Frame = 0
Query:    6 KVQANCGGEVFTATGLMVTERNWLNIYEPYERWTGRTIPEFFQGQEFVPSTL 57
            KV ANCGGE FTATGLMVTERNWL++YEP+ERWTGR IPEFFQGQEFVPS L
Sbjct:  239 KVLANCGGEDFTATGLMVTERNWLDVYEPFERWTGRNIPEFFQGQEFVPSVL 290          
BLAST of mRNA_F-distichus_contig98566.19295.1 vs. uniprot
Match: A0A835YM61_9STRA (DNA topoisomerase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM61_9STRA)

HSP 1 Score: 72.0 bits (175), Expect = 2.520e-13
Identity = 29/45 (64.44%), Postives = 37/45 (82.22%), Query Frame = 0
Query:   13 GEVFTATGLMVTERNWLNIYEPYERWTGRTIPEFFQGQEFVPSTL 57
            GE F+A+GLM+TERNWL IY P+ERW+ + IP F  GQEFVP++L
Sbjct:  262 GEEFSASGLMITERNWLEIYHPWERWSDKAIPTFTVGQEFVPTSL 306          
BLAST of mRNA_F-distichus_contig98566.19295.1 vs. uniprot
Match: A0A4Y7T343_9AGAR (DNA topoisomerase n=2 Tax=Coprinellus micaceus TaxID=71717 RepID=A0A4Y7T343_9AGAR)

HSP 1 Score: 71.6 bits (174), Expect = 3.450e-13
Identity = 29/51 (56.86%), Postives = 41/51 (80.39%), Query Frame = 0
Query:    7 VQANCGGEVFTATGLMVTERNWLNIYEPYERWTGRTIPEFFQGQEFVPSTL 57
            V+  CGGE+F+ +GL+VTERN+L +Y PY++W  RT+P F QG+EF PS+L
Sbjct:  426 VEVECGGELFSTSGLIVTERNYLEVY-PYDKWASRTLPAFEQGEEFDPSSL 475          
BLAST of mRNA_F-distichus_contig98566.19295.1 vs. uniprot
Match: UPI000444A043 (prokaryotic type I DNA topoisomerase n=1 Tax=Stereum hirsutum (strain FP-91666) TaxID=721885 RepID=UPI000444A043)

HSP 1 Score: 68.9 bits (167), Expect = 3.050e-12
Identity = 29/55 (52.73%), Postives = 40/55 (72.73%), Query Frame = 0
Query:    1 LSIPLKVQANCGGEVFTATGLMVTERNWLNIYEPYERWTGRTIPEFFQGQEFVPS 55
            L     V   CGGE F ATGL++ ERN+LN+Y PYE+W+G+ +P+F +G EF+PS
Sbjct:  422 LGFQTTVDVLCGGEEFYATGLIILERNFLNVY-PYEKWSGKELPDFEEGDEFMPS 475          
BLAST of mRNA_F-distichus_contig98566.19295.1 vs. uniprot
Match: A0A067Q4C2_9AGAM (DNA topoisomerase n=1 Tax=Jaapia argillacea MUCL 33604 TaxID=933084 RepID=A0A067Q4C2_9AGAM)

HSP 1 Score: 68.9 bits (167), Expect = 3.070e-12
Identity = 29/55 (52.73%), Postives = 42/55 (76.36%), Query Frame = 0
Query:    1 LSIPLKVQANCGGEVFTATGLMVTERNWLNIYEPYERWTGRTIPEFFQGQEFVPS 55
            L +   V A CGGE F+ATGL+V ERN+L +Y PY++W+ + +PEF +GQEF+P+
Sbjct:  421 LGLQRTVDAECGGEEFSATGLVVLERNYLLVY-PYDKWSDKELPEFTEGQEFMPT 474          
BLAST of mRNA_F-distichus_contig98566.19295.1 vs. uniprot
Match: A0A8H6YEU9_9AGAR (DNA topoisomerase n=1 Tax=Mycena venus TaxID=2733690 RepID=A0A8H6YEU9_9AGAR)

HSP 1 Score: 68.2 bits (165), Expect = 5.720e-12
Identity = 27/49 (55.10%), Postives = 38/49 (77.55%), Query Frame = 0
Query:    7 VQANCGGEVFTATGLMVTERNWLNIYEPYERWTGRTIPEFFQGQEFVPS 55
            V   CGGE F ATGL+V +RN+L++Y PY++WTG  +P+F +G+EF PS
Sbjct:  425 VDVTCGGEAFYATGLVVHQRNYLDVY-PYDKWTGNRVPDFVEGEEFQPS 472          
BLAST of mRNA_F-distichus_contig98566.19295.1 vs. uniprot
Match: J9J1U5_9SPIT (DNA topoisomerase n=1 Tax=Oxytricha trifallax TaxID=1172189 RepID=J9J1U5_9SPIT)

HSP 1 Score: 67.8 bits (164), Expect = 7.830e-12
Identity = 24/52 (46.15%), Postives = 34/52 (65.38%), Query Frame = 0
Query:    6 KVQANCGGEVFTATGLMVTERNWLNIYEPYERWTGRTIPEFFQGQEFVPSTL 57
            K++   GGE F   GL++ E NWL IY+PYE+W   T+P F +G +F PS +
Sbjct:  545 KIEVEIGGETFKTRGLVIVESNWLEIYQPYEKWADNTLPNFQEGDQFTPSLI 596          
BLAST of mRNA_F-distichus_contig98566.19295.1 vs. uniprot
Match: A0A8H5BSQ3_9AGAR (DNA topoisomerase n=1 Tax=Psilocybe cf. subviscida TaxID=2480587 RepID=A0A8H5BSQ3_9AGAR)

HSP 1 Score: 67.8 bits (164), Expect = 7.830e-12
Identity = 28/49 (57.14%), Postives = 39/49 (79.59%), Query Frame = 0
Query:    7 VQANCGGEVFTATGLMVTERNWLNIYEPYERWTGRTIPEFFQGQEFVPS 55
            V+  CGGE F+ATGL+V ERN+L +Y  Y++WTG T+P+F +GQEF P+
Sbjct:  420 VEVVCGGEEFSATGLVVKERNYLVVYV-YDKWTGHTVPDFVEGQEFAPT 467          
BLAST of mRNA_F-distichus_contig98566.19295.1 vs. uniprot
Match: A0A5C3MFW6_9AGAR (DNA topoisomerase n=1 Tax=Crucibulum laeve TaxID=68775 RepID=A0A5C3MFW6_9AGAR)

HSP 1 Score: 66.6 bits (161), Expect = 1.990e-11
Identity = 28/45 (62.22%), Postives = 36/45 (80.00%), Query Frame = 0
Query:   11 CGGEVFTATGLMVTERNWLNIYEPYERWTGRTIPEFFQGQEFVPS 55
            CGGE F ATGL+V E+N+L +Y PY++WTG  IPEF +G+EF PS
Sbjct:  430 CGGEDFYATGLVVLEKNYLEVY-PYDKWTGHVIPEFAEGEEFDPS 473          
BLAST of mRNA_F-distichus_contig98566.19295.1 vs. uniprot
Match: A0A0C9XCQ7_9AGAR (DNA topoisomerase n=1 Tax=Laccaria amethystina LaAM-08-1 TaxID=1095629 RepID=A0A0C9XCQ7_9AGAR)

HSP 1 Score: 66.6 bits (161), Expect = 2.000e-11
Identity = 28/49 (57.14%), Postives = 38/49 (77.55%), Query Frame = 0
Query:    7 VQANCGGEVFTATGLMVTERNWLNIYEPYERWTGRTIPEFFQGQEFVPS 55
            V+  CGGE FTATGL+V +RN+L +Y PY++W G T+P F +G+EF PS
Sbjct:  420 VEVVCGGEEFTATGLIVLQRNYLLVY-PYDKWIGHTVPNFQEGEEFDPS 467          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig98566.19295.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUP7_ECTSI1.470e-2486.54DNA topoisomerase n=1 Tax=Ectocarpus siliculosus T... [more]
A0A835YM61_9STRA2.520e-1364.44DNA topoisomerase (Fragment) n=1 Tax=Tribonema min... [more]
A0A4Y7T343_9AGAR3.450e-1356.86DNA topoisomerase n=2 Tax=Coprinellus micaceus Tax... [more]
UPI000444A0433.050e-1252.73prokaryotic type I DNA topoisomerase n=1 Tax=Stere... [more]
A0A067Q4C2_9AGAM3.070e-1252.73DNA topoisomerase n=1 Tax=Jaapia argillacea MUCL 3... [more]
A0A8H6YEU9_9AGAR5.720e-1255.10DNA topoisomerase n=1 Tax=Mycena venus TaxID=27336... [more]
J9J1U5_9SPIT7.830e-1246.15DNA topoisomerase n=1 Tax=Oxytricha trifallax TaxI... [more]
A0A8H5BSQ3_9AGAR7.830e-1257.14DNA topoisomerase n=1 Tax=Psilocybe cf. subviscida... [more]
A0A5C3MFW6_9AGAR1.990e-1162.22DNA topoisomerase n=1 Tax=Crucibulum laeve TaxID=6... [more]
A0A0C9XCQ7_9AGAR2.000e-1157.14DNA topoisomerase n=1 Tax=Laccaria amethystina LaA... [more]

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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013825DNA topoisomerase, type IA, central region, subdomain 2GENE3D2.70.20.10coord: 3..57
e-value: 7.7E-14
score: 53.9
IPR000380DNA topoisomerase, type IAPANTHERPTHR11390PROKARYOTIC DNA TOPOISOMERASEcoord: 6..56
NoneNo IPR availablePANTHERPTHR11390:SF21DNA TOPOISOMERASE 3-ALPHAcoord: 6..56
IPR023405DNA topoisomerase, type IA, core domainSUPERFAMILY56712Prokaryotic type I DNA topoisomerasecoord: 6..54

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013825DNA topoisomerase, type IA, central region, subdomain 2GENE3D2.70.20.10coord: 3..57
e-value: 7.7E-14
score: 53.9
IPR000380DNA topoisomerase, type IAPANTHERPTHR11390PROKARYOTIC DNA TOPOISOMERASEcoord: 6..56
NoneNo IPR availablePANTHERPTHR11390:SF21DNA TOPOISOMERASE 3-ALPHAcoord: 6..56
IPR023405DNA topoisomerase, type IA, core domainSUPERFAMILY56712Prokaryotic type I DNA topoisomerasecoord: 6..54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig98566contigF-distichus_contig98566:1402..1572 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig98566.19295.1mRNA_F-distichus_contig98566.19295.1Fucus distichus monoicousmRNAF-distichus_contig98566 1402..1572 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig98566.19295.1 ID=prot_F-distichus_contig98566.19295.1|Name=mRNA_F-distichus_contig98566.19295.1|organism=Fucus distichus monoicous|type=polypeptide|length=57bp
LSIPLKVQANCGGEVFTATGLMVTERNWLNIYEPYERWTGRTIPEFFQGQ
EFVPSTL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013825Topo_IA_cen_sub2
IPR000380Topo_IA
IPR023405Topo_IA_core_domain