prot_F-distichus_contig98566.19294.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig98566.19294.1
Unique Nameprot_F-distichus_contig98566.19294.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length43
Homology
BLAST of mRNA_F-distichus_contig98566.19294.1 vs. uniprot
Match: D7FUP7_ECTSI (DNA topoisomerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUP7_ECTSI)

HSP 1 Score: 84.3 bits (207), Expect = 6.270e-18
Identity = 42/43 (97.67%), Postives = 42/43 (97.67%), Query Frame = 0
Query:    1 MDEGLTQAPPLLSESDLIGLMDQKGIGTDATIAEHIQKIQQRK 43
            MDEG TQAPPLLSESDLIGLMDQKGIGTDATIAEHIQKIQQRK
Sbjct:  292 MDEGRTQAPPLLSESDLIGLMDQKGIGTDATIAEHIQKIQQRK 334          
BLAST of mRNA_F-distichus_contig98566.19294.1 vs. uniprot
Match: L1K3I3_GUITC (DNA topoisomerase n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1K3I3_GUITC)

HSP 1 Score: 69.7 bits (169), Expect = 8.830e-13
Identity = 34/42 (80.95%), Postives = 36/42 (85.71%), Query Frame = 0
Query:    1 MDEGLTQAPPLLSESDLIGLMDQKGIGTDATIAEHIQKIQQR 42
            M EG TQAPPLLSE+DLI LMD  GIGTDATIAEHI K+QQR
Sbjct:  478 MTEGRTQAPPLLSEADLISLMDSHGIGTDATIAEHITKVQQR 519          
BLAST of mRNA_F-distichus_contig98566.19294.1 vs. uniprot
Match: A0A7S0D577_9EUKA (DNA topoisomerase (Fragment) n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0D577_9EUKA)

HSP 1 Score: 67.4 bits (163), Expect = 5.750e-12
Identity = 31/43 (72.09%), Postives = 38/43 (88.37%), Query Frame = 0
Query:    1 MDEGLTQAPPLLSESDLIGLMDQKGIGTDATIAEHIQKIQQRK 43
            ++EG T+ PPLLSE+DLI LM+Q GIGTDATIAEHI K++QRK
Sbjct:  208 LEEGKTEPPPLLSEADLISLMNQNGIGTDATIAEHIDKVKQRK 250          
BLAST of mRNA_F-distichus_contig98566.19294.1 vs. uniprot
Match: A0A7S0G008_9DINO (DNA topoisomerase (Fragment) n=1 Tax=Pyrodinium bahamense TaxID=73915 RepID=A0A7S0G008_9DINO)

HSP 1 Score: 65.5 bits (158), Expect = 9.640e-12
Identity = 32/43 (74.42%), Postives = 36/43 (83.72%), Query Frame = 0
Query:    1 MDEGLTQAPPLLSESDLIGLMDQKGIGTDATIAEHIQKIQQRK 43
            M E +TQ PPLLSE+DLIG MD+ GIGTDAT+ EHIQKIQ RK
Sbjct:  168 MIESVTQPPPLLSEADLIGAMDRNGIGTDATMHEHIQKIQTRK 210          
BLAST of mRNA_F-distichus_contig98566.19294.1 vs. uniprot
Match: R0M9K0_NOSB1 (DNA topoisomerase n=4 Tax=Opisthokonta TaxID=33154 RepID=R0M9K0_NOSB1)

HSP 1 Score: 64.7 bits (156), Expect = 5.110e-11
Identity = 31/42 (73.81%), Postives = 35/42 (83.33%), Query Frame = 0
Query:    1 MDEGLTQAPPLLSESDLIGLMDQKGIGTDATIAEHIQKIQQR 42
            MDE  T+ PP L+ESDLI LMD+ GIGTDATI EHIQKIQ+R
Sbjct:  459 MDEHKTEPPPFLTESDLIALMDKNGIGTDATIHEHIQKIQER 500          
BLAST of mRNA_F-distichus_contig98566.19294.1 vs. uniprot
Match: A0A1J4JYL2_9EUKA (DNA topoisomerase n=1 Tax=Tritrichomonas foetus TaxID=1144522 RepID=A0A1J4JYL2_9EUKA)

HSP 1 Score: 64.7 bits (156), Expect = 5.120e-11
Identity = 31/42 (73.81%), Postives = 37/42 (88.10%), Query Frame = 0
Query:    1 MDEGLTQAPPLLSESDLIGLMDQKGIGTDATIAEHIQKIQQR 42
            M EG+T APPLL+E +LI LMD++GIGTDATIAEHI+KI QR
Sbjct:  485 MKEGMTTAPPLLTEPELIRLMDKEGIGTDATIAEHIEKILQR 526          
BLAST of mRNA_F-distichus_contig98566.19294.1 vs. uniprot
Match: Q8SS31_ENCCU (DNA topoisomerase n=3 Tax=Encephalitozoon cuniculi TaxID=6035 RepID=Q8SS31_ENCCU)

HSP 1 Score: 64.3 bits (155), Expect = 6.990e-11
Identity = 31/42 (73.81%), Postives = 36/42 (85.71%), Query Frame = 0
Query:    1 MDEGLTQAPPLLSESDLIGLMDQKGIGTDATIAEHIQKIQQR 42
            +DEG T AP  LSE++LIGLMD+ GIGTDATI EHIQKIQ+R
Sbjct:  460 IDEGETSAPKYLSEAELIGLMDKNGIGTDATIHEHIQKIQER 501          
BLAST of mRNA_F-distichus_contig98566.19294.1 vs. uniprot
Match: A0A6B2L0I0_9EUKA (DNA topoisomerase n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L0I0_9EUKA)

HSP 1 Score: 64.3 bits (155), Expect = 7.000e-11
Identity = 31/43 (72.09%), Postives = 36/43 (83.72%), Query Frame = 0
Query:    1 MDEGLTQAPPLLSESDLIGLMDQKGIGTDATIAEHIQKIQQRK 43
            M+EG T APPLL+E DL+ LMD+  IGTDATIAEHI KIQ+RK
Sbjct:   38 MEEGSTTAPPLLTEPDLVTLMDKNKIGTDATIAEHIHKIQERK 80          
BLAST of mRNA_F-distichus_contig98566.19294.1 vs. uniprot
Match: A0A0B2W574_TOXCA (DNA topoisomerase n=1 Tax=Toxocara canis TaxID=6265 RepID=A0A0B2W574_TOXCA)

HSP 1 Score: 63.5 bits (153), Expect = 1.300e-10
Identity = 31/43 (72.09%), Postives = 37/43 (86.05%), Query Frame = 0
Query:    1 MDEGLTQAPPLLSESDLIGLMDQKGIGTDATIAEHIQKIQQRK 43
            M+EG TQ PPLLSE+DLI LMD+ GIGTDAT AEHI+ I+QR+
Sbjct:  561 MNEGHTQPPPLLSEADLIALMDKYGIGTDATHAEHIETIKQRR 603          
BLAST of mRNA_F-distichus_contig98566.19294.1 vs. uniprot
Match: A0A183UA66_TOXCA (DNA topoisomerase n=1 Tax=Toxocara canis TaxID=6265 RepID=A0A183UA66_TOXCA)

HSP 1 Score: 63.5 bits (153), Expect = 1.300e-10
Identity = 31/43 (72.09%), Postives = 37/43 (86.05%), Query Frame = 0
Query:    1 MDEGLTQAPPLLSESDLIGLMDQKGIGTDATIAEHIQKIQQRK 43
            M+EG TQ PPLLSE+DLI LMD+ GIGTDAT AEHI+ I+QR+
Sbjct:  736 MNEGHTQPPPLLSEADLIALMDKYGIGTDATHAEHIETIKQRR 778          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig98566.19294.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FUP7_ECTSI6.270e-1897.67DNA topoisomerase n=1 Tax=Ectocarpus siliculosus T... [more]
L1K3I3_GUITC8.830e-1380.95DNA topoisomerase n=1 Tax=Guillardia theta (strain... [more]
A0A7S0D577_9EUKA5.750e-1272.09DNA topoisomerase (Fragment) n=1 Tax=Amorphochlora... [more]
A0A7S0G008_9DINO9.640e-1274.42DNA topoisomerase (Fragment) n=1 Tax=Pyrodinium ba... [more]
R0M9K0_NOSB15.110e-1173.81DNA topoisomerase n=4 Tax=Opisthokonta TaxID=33154... [more]
A0A1J4JYL2_9EUKA5.120e-1173.81DNA topoisomerase n=1 Tax=Tritrichomonas foetus Ta... [more]
Q8SS31_ENCCU6.990e-1173.81DNA topoisomerase n=3 Tax=Encephalitozoon cuniculi... [more]
A0A6B2L0I0_9EUKA7.000e-1172.09DNA topoisomerase n=1 Tax=Arcella intermedia TaxID... [more]
A0A0B2W574_TOXCA1.300e-1072.09DNA topoisomerase n=1 Tax=Toxocara canis TaxID=626... [more]
A0A183UA66_TOXCA1.300e-1072.09DNA topoisomerase n=1 Tax=Toxocara canis TaxID=626... [more]

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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013497DNA topoisomerase, type IA, centralPFAMPF01131Topoisom_baccoord: 2..43
e-value: 1.0E-12
score: 47.8
IPR013824DNA topoisomerase, type IA, central region, subdomain 1GENE3D1.10.460.10coord: 2..43
e-value: 9.8E-15
score: 56.5
IPR000380DNA topoisomerase, type IAPANTHERPTHR11390PROKARYOTIC DNA TOPOISOMERASEcoord: 1..43
NoneNo IPR availablePANTHERPTHR11390:SF21DNA TOPOISOMERASE 3-ALPHAcoord: 1..43
IPR023405DNA topoisomerase, type IA, core domainSUPERFAMILY56712Prokaryotic type I DNA topoisomerasecoord: 2..43

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013497DNA topoisomerase, type IA, centralPFAMPF01131Topoisom_baccoord: 2..43
e-value: 1.0E-12
score: 47.8
IPR013824DNA topoisomerase, type IA, central region, subdomain 1GENE3D1.10.460.10coord: 2..43
e-value: 9.8E-15
score: 56.5
IPR000380DNA topoisomerase, type IAPANTHERPTHR11390PROKARYOTIC DNA TOPOISOMERASEcoord: 1..43
NoneNo IPR availablePANTHERPTHR11390:SF21DNA TOPOISOMERASE 3-ALPHAcoord: 1..43
IPR023405DNA topoisomerase, type IA, core domainSUPERFAMILY56712Prokaryotic type I DNA topoisomerasecoord: 2..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig98566contigF-distichus_contig98566:130..258 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig98566.19294.1mRNA_F-distichus_contig98566.19294.1Fucus distichus monoicousmRNAF-distichus_contig98566 130..261 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig98566.19294.1 ID=prot_F-distichus_contig98566.19294.1|Name=mRNA_F-distichus_contig98566.19294.1|organism=Fucus distichus monoicous|type=polypeptide|length=43bp
MDEGLTQAPPLLSESDLIGLMDQKGIGTDATIAEHIQKIQQRK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013497Topo_IA_cen
IPR013824Topo_IA_cen_sub1
IPR000380Topo_IA
IPR023405Topo_IA_core_domain