prot_F-distichus_contig9855.19291.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig9855.19291.1
Unique Nameprot_F-distichus_contig9855.19291.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length272
Homology
BLAST of mRNA_F-distichus_contig9855.19291.1 vs. uniprot
Match: D7FYW2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYW2_ECTSI)

HSP 1 Score: 244 bits (623), Expect = 1.830e-77
Identity = 131/237 (55.27%), Postives = 166/237 (70.04%), Query Frame = 0
Query:   25 ITFGLFCVATSFVVNPSLHTKRLQHDSLAPFMIPPARTRTSSTTRVMMAGFGAKPKETPPVTGAGRGQRAYERQVRSYKGLRAAGAEGIDVYVHRVGGDDKFIFAGKVAWSSEVSAEQAIQWQRDLVLDHVKVLEPLWNTKPSPQMRIFTAPLNTEVNVAKNVLDLTRALAGKGKGQDKATVSTDGMTSAQVGFSPEMYEKGQDYYYVRKLEDGRCPAPPAEVKIETMDTLKAAGAV 261
            I  GL C   SF   P     +L+  S A  MIP  R R+++++RVMM G    P++   V G GRGQ AY+RQV+SY GL  AGAEG DVYVHR G DDKFIF GK AWSS ++ +QA+Q+QR L+L HV++LEP+W  KP+P MRIFTAP+N+E+ VA+N+ DL R L G GKG+D   V  D +T  +VG  PE+YE G+ Y+YVRKL+DG+CPAPP+EV IETMD L A G V
Sbjct:   11 IALGLLCDVDSFA--PLTAGWQLRQTSSAWHMIPSGRPRSATSSRVMMMGGFGGPEKKKKVVGVGRGQDAYQRQVKSYHGLTEAGAEGADVYVHREG-DDKFIFMGKAAWSSGITVQQALQFQRGLILGHVELLEPMWKDKPAP-MRIFTAPINSEIEVARNIHDLVRVL-GPGKGKD---VKVDKLTPQEVGLRPELYELGEPYFYVRKLDDGKCPAPPSEVMIETMDNLVAKGVV 239          
BLAST of mRNA_F-distichus_contig9855.19291.1 vs. uniprot
Match: A0A448ZK73_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZK73_9STRA)

HSP 1 Score: 58.5 bits (140), Expect = 2.210e-6
Identity = 51/179 (28.49%), Postives = 84/179 (46.93%), Query Frame = 0
Query:   92 QRAYERQVRSYKGLRAAGAEGI--DVYVHRVGGDDKFIFAGKVAWSSEVSAEQAIQWQRDLVLDHVKVLEPLWNTKPSPQMRIFTAPLNTEVNVAKNVLDLTRALAGKGKGQDKATVSTDGMTSAQVGFSPEMYEKGQDYYYVRKLEDGRCPA-----------PPAEVKIETMDTLKA 257
            +R  +R   ++  LR  G + +  DVY       ++  + GKVA  ++VS E  I  Q +++  H   L P+        + I+TAP +TE++VA N  +L  A        +K  V    + +  +GF  E+Y++G++ +   + EDG  PA           PP E   E M+ LKA
Sbjct:   91 ERNVKRCHENFLNLRKVGGKDLCHDVYAKSPLKKEEVWYVGKVAKITDVSLEDCIARQWNIIETHAANLRPIELYPQRGNLEIWTAPGDTELDVAYNRPELVMAR------MEKYEVLAKDLRNNLIGFQGEVYQEGEEGFRTWRKEDG-SPARPEINPGGETRPPTE---EEMEQLKA 259          
BLAST of mRNA_F-distichus_contig9855.19291.1 vs. uniprot
Match: A0A7S4ENJ4_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4ENJ4_9STRA)

HSP 1 Score: 56.6 bits (135), Expect = 1.100e-5
Identity = 44/155 (28.39%), Postives = 76/155 (49.03%), Query Frame = 0
Query:   92 QRAYERQVRSYKGLRAAGAEGI--DVYVHRVGGDDKFIFAGKVAWSSEVSAEQAIQWQRDLVLDHVKVLEPLWNTKPSPQMRIFTAPLNTEVNVAKNVLDLTRALAGKGKGQDKATVSTDGMTSAQVGFSPEMYEKGQDYYYVRKLEDGRCPAPP 244
            +R  +R  +++  LR  G + +  DVY       ++  + GKVA  SEVS E  I  Q +++  H   L P+        + ++TAP +TE+ VA N  +L           +K  V +  + +  +GF  E+Y++G++ +   + EDG  PA P
Sbjct:  110 ERNVKRCHQNFLSLRNVGGKDLCNDVYAKSPVQKEEVWYVGKVAKVSEVSLEDCIARQWNVIETHAANLRPIELYGHRGNLELWTAPGDTELEVAYNRPELVMVK------MEKYAVDSKDLRNNLIGFQGEVYQEGEEGFRSWRNEDG-SPARP 257          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig9855.19291.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FYW2_ECTSI1.830e-7755.27Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A448ZK73_9STRA2.210e-628.49Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S4ENJ4_9STRA1.100e-528.39Hypothetical protein n=1 Tax=Pseudo-nitzschia aust... [more]
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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 39..271
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..38
NoneNo IPR availableTMHMMTMhelixcoord: 19..38

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 39..271
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..38
NoneNo IPR availableTMHMMTMhelixcoord: 19..38

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig9855contigF-distichus_contig9855:5988..7666 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig9855.19291.1mRNA_F-distichus_contig9855.19291.1Fucus distichus monoicousmRNAF-distichus_contig9855 5455..7698 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig9855.19291.1 ID=prot_F-distichus_contig9855.19291.1|Name=mRNA_F-distichus_contig9855.19291.1|organism=Fucus distichus monoicous|type=polypeptide|length=272bp
MSNLIQKSATSTAAMTNSVLLGPLITFGLFCVATSFVVNPSLHTKRLQHD
SLAPFMIPPARTRTSSTTRVMMAGFGAKPKETPPVTGAGRGQRAYERQVR
SYKGLRAAGAEGIDVYVHRVGGDDKFIFAGKVAWSSEVSAEQAIQWQRDL
VLDHVKVLEPLWNTKPSPQMRIFTAPLNTEVNVAKNVLDLTRALAGKGKG
QDKATVSTDGMTSAQVGFSPEMYEKGQDYYYVRKLEDGRCPAPPAEVKIE
TMDTLKAAGAVADEGLPTTAE*
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