prot_F-distichus_contig9844.19279.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig9844.19279.1
Unique Nameprot_F-distichus_contig9844.19279.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length571
Homology
BLAST of mRNA_F-distichus_contig9844.19279.1 vs. uniprot
Match: D7FVS6_ECTSI (G-rich sequence factor 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVS6_ECTSI)

HSP 1 Score: 409 bits (1050), Expect = 5.350e-134
Identity = 198/393 (50.38%), Postives = 280/393 (71.25%), Query Frame = 0
Query:  179 PAPIFQVQVDGIAFSVSREEVEEWFRDAGVTPANVTLIMRPEESPRAGQNKGRAYLELENEEETLKALSISGRSMGDRWVSIARLDAPLEECRTISVRGLKGISEEDFKQFLEEESGVAPVSVRVVPDNPVRNQSGLAFAEFESPEDAKKVLSLDGINIMSRWIDVSLQTMKKRVREPRTGADSAPPFGEDAKGGIVMVLKGLPFSLSDDEIKAFLLQYDITEEEMVQMKVPKHNNTNSNTGIAFLHLKDEAAADKVMALRGSYIGDRWVDVSRYGDGTK-SPRLSHKAAIENARSTVPAALRKKYPDLPCVVVSGLPFHKSKTDVTEYLAEQGVPETAVEEMQMPLFLSTQNNTGACWLVINEASYGGYAYNRIMSLNGAIMDDRWVTIADA 570
            P P++ +QVDG+ F+++ EE+E+WF +AG +P  VT+ + PE S RAGQNKG+AYL    EE+  KALS+SGRS+G+RW++I+RL  PLEE  TI+++GL+G  E +     EE  G APV V++V +NP R++ GLAF +FE P+ A+  L LDG NI ++W+DVSL  MK+   E R G  S PPFG D    +V++LKGLPFSL +DEIKAF+L ++I E+E+V + VPK N T  NTGIA +H K + +  + + L+G++IG+RWVDVSR+ +  K + R SH+  +E  RS V  +L++K+P LP V +SGLPFHK++ +V E+L   GVP +A+ E++MPLFL TQNNTG CW+VI++      AY  +M LNGA +DDRW+T+ DA
Sbjct:  117 PEPLYLIQVDGLPFTMATEELEQWFEEAGCSPPKVTVPLWPERSIRAGQNKGKAYLHFSGEEDVRKALSLSGRSIGERWINISRLAQPLEEACTITIKGLQGFPESEVVAIFEEAVGAAPVEVKIV-ENPNRSR-GLAFIKFEMPDLARAALHLDGTNIQNQWVDVSLHVMKQSSNEFRLGTGSQPPFGPDVPDEMVVMLKGLPFSLLEDEIKAFILNHEIAEDEIVAINVPKFNETQFNTGIAMIHFKSDESVARALELKGTHIGERWVDVSRWNERNKPNQRKSHRDQMEETRSAVKTSLKEKHPSLPVVSISGLPFHKTEEEVIEFLEASGVPRSAMLEVEMPLFLQTQNNTGTCWVVISDEG----AYETLMELNGATLDDRWLTVVDA 503          
BLAST of mRNA_F-distichus_contig9844.19279.1 vs. uniprot
Match: A0A6H5KVQ1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVQ1_9PHAE)

HSP 1 Score: 404 bits (1038), Expect = 2.040e-132
Identity = 235/534 (44.01%), Postives = 327/534 (61.24%), Query Frame = 0
Query:   13 MTSLIRTFARGAPRATGLVARGSAYVRPTRARGVRILLTRPLSGLYRAQPHRISVDYRACGPQQTGSALAQSSGCLTQPQRDQLRRPMSFQSDNHHHVPSQDAVPTEENTPSVDVTADDASTPEDTDTAAIETDGDYATTEAEGAAAQATGSAEDGEDGDMAS--GNAPAPIFQVQVDGIAFSVSREEVEEWFRDAGVTPANVTLIMRPEESPRAGQNKGRAYLELENEEETLKALSISGRSMGDRWVSIARLDAPLEECRTISVRGLKGISEEDFKQFLEEESGVAPVSVRVVPDNPVRNQSGLAFAEFESPEDAKKVLSLDGINIMSRWIDVSLQTMKKRVREPRTGADSAPPFGEDAKGGIVMVLKGLPFSLSDDEIKAFLLQYDITEEEMVQMKVPKHNNTNSNTGIAFLHLKDEAAADKVMALRGSYIGDRWVDVSRYGDGTK-SPRLSHKAAIENARSTVPAALRKKYPDLPCVVVSGLPFHKSKTDVTEYLAEQGVPETAVEEMQMPLFLSTQNNTGACWLVINEAS 543
            MTSL+ T ARG P+A   +A G A +R TR R +R L   PLS   R                   SAL+ +    T  Q+ Q RR +S Q        S+D  P E                              AT  A G A  ATG  E+  + ++      +P P++ +QV+G+ F+++ EE+E+WF +A  +PA V + + PE S RAGQNKG AYL   +EE+T KALS+SGRS+GDRW++I+RL  PLEE  T++++GL G  E +     EE  G APV V ++ +NP R++ GLAF +FE+P+ A+  L LDG NI ++W+DVSL  MK+  +E R G+ S PPFG D    +V++LKGLPFSL DDEIKAF+L +DI E+E+V M VPK N T  NTGIA +H K + +  + + L+G+YIG+RWVDVSR+ D  K + + SH+  +E  RS V A+L++K+P LP V +SGLPFHK++ +V E+L   GVP +A+ E++MPLFL TQNNTGACW+VI++ S
Sbjct:    1 MTSLLSTIARGTPKAARFMAGGGAGLRATRIRTLRTLTAGPLSADSRPS---------------LSSALSPAPAAPTHQQQLQ-RRFLSIQ--------SEDINPQEAG----------------------------ATAAAAGEAPAATGEGEEVSEEEVTPPPAGSPEPLYLIQVNGLPFTMATEEIEQWFDEAACSPAKVVVPLWPERSIRAGQNKGMAYLYFSSEEDTQKALSLSGRSIGDRWINISRLVQPLEESCTVTIKGLHGFPEGEVVAIFEEAVGAAPVEVNII-ENPNRSR-GLAFVKFETPDLARAALHLDGSNIQNQWVDVSLHVMKQTSKEFRLGSGSQPPFGPDVPDEMVVMLKGLPFSLLDDEIKAFILNHDIAEDEIVAMSVPKFNETQFNTGIAMIHFKSDESVARALELKGTYIGERWVDVSRWNDRNKPNQKKSHRQQMEETRSAVQASLKEKHPSLPVVSISGLPFHKTEEEVIEFLEASGVPRSAMLEVEMPLFLQTQNNTGACWVVISDVS 480          
BLAST of mRNA_F-distichus_contig9844.19279.1 vs. uniprot
Match: UPI00097DE4AF (G-rich sequence factor 1-like n=1 Tax=Paralichthys olivaceus TaxID=8255 RepID=UPI00097DE4AF)

HSP 1 Score: 80.9 bits (198), Expect = 6.120e-13
Identity = 79/291 (27.15%), Postives = 135/291 (46.39%), Query Frame = 0
Query:  182 IFQVQVDGIAFSVSREEVEEWFRDAGVTPANVTLIMRPEESPRAGQNKGRAYLELENEEETLKALSISGRSMGDRWVSIARL-------------DAPLEECRTISVRGLK-GISEEDFKQFLEEESG--VAPVSVRVVPDNPVRNQSGLAFAEFESPEDAKKVLSLDGINIMSRWIDVSLQTMKK---RVREPRTGADSAPPFGEDAKGGIVMV---LKGLPFSLSDDEIKAFLLQYDITEEEMVQMKVPKHNNTNSNTGIAFLHLKDEAAADKVMALRGSYIGDRWVDV 450
            +F VQV G+ +S S +++  +F +  +      + +      R G++ GRA++ELE+EE+  KAL    + +G R++ +  +              AP  +   + +RGL    SE D  +F    SG  +A   + VVPD+  RN SG AF  F S E A   L  D   I SR+I+V   T ++   R R+      +    G      + +    ++GLPF  S ++I  F     +++   + ++      T+    + F   +D AAA   M+    YIG+R+V++
Sbjct:   42 VFIVQVKGLPWSCSAQDLMHFFSECRIRDGLKGIHLPVN---RLGRSSGRAFIELEHEEDVNKALEKHRQYLGPRYIEVYEVTNSDAETILRKAVQAPAADS-VVRIRGLPFSCSEADIVKFF---SGLDIAENGIMVVPDHKGRN-SGEAFVRFTSQEAASGALQRDRHLIGSRYIEVFPSTSEEINSRRRKTMGSTQTNHRIGSQLSSTVPLHFIHMRGLPFQASGEDIVKFFFPLAVSK---ILIECGADGRTSGEADVYFTCHQDAAAA---MSKDRQYIGERYVEL 318          
BLAST of mRNA_F-distichus_contig9844.19279.1 vs. uniprot
Match: UPI001FB7E995 (G-rich sequence factor 1 isoform X1 n=2 Tax=Mugil cephalus TaxID=48193 RepID=UPI001FB7E995)

HSP 1 Score: 78.2 bits (191), Expect = 8.040e-12
Identity = 79/304 (25.99%), Postives = 138/304 (45.39%), Query Frame = 0
Query:  182 IFQVQVDGIAFSVSREEVEEWFRDAGVTPANVTLIMRPEESPRAGQNKGRAYLELENEEETLKALSISGRSMGDRWVSIARL-----DAPLEEC------------RTISVRGLK-GISEEDFKQFLEEESG--VAPVSVRVVPDNPVRNQSGLAFAEFESPEDAKKVLSLDGINIMSRWIDV------SLQTMKKRVREP---RTGADSAPPFG------EDAKGGIVMVLKGLPFSLSDDEIKAFLLQYDITEEEMVQMKVPKHNNTNSNTGIAFLHLKDEAAADKVMALRGSYIGDRWVDV 450
            ++ VQ+ G+ +S + E + ++F D  +      + +   E  R G+  GRA++ELE+EE+  KAL      +G R++ +  +     +A L+E               + +RGL    ++ED   F    SG  +A   + +V D   RN SG AF +F S EDA K L  D  N+ +R+I+V       + +  KR   P   ++G  S+P  G      +       + ++GLP+ ++ DEI  F     +++   +      H   N    + F   +D  AA   M+     IG R++++
Sbjct:   87 VYLVQLKGLPWSCTCENILQFFSDCRINGGEKGIHL---ELDRHGRASGRAFIELEHEEDVCKALEKHRHYLGPRYIEVYEVTNTDAEAVLKEVIQKQANPPPADDGVVRIRGLPYSCTKEDIADFF---SGLNIAENGITIVTDFKGRN-SGNAFVQFASQEDADKALLKDRENMGNRYIEVFPSRRDDIHSTWKRKMSPDPSQSGFVSSPQAGHRNVLPQRLSMNHYVHMRGLPYQVTADEIVMFFSPLSLSK---IVFNFNNHGRLNGEADVYFHSNQDAIAA---MSRDKMNIGQRYIEL 377          
BLAST of mRNA_F-distichus_contig9844.19279.1 vs. uniprot
Match: UPI00159BFBA7 (G-rich sequence factor 1 n=2 Tax=Hippoglossus TaxID=8266 RepID=UPI00159BFBA7)

HSP 1 Score: 77.4 bits (189), Expect = 1.520e-11
Identity = 81/309 (26.21%), Postives = 139/309 (44.98%), Query Frame = 0
Query:  182 IFQVQVDGIAFSVSREEVEEWFRDAGVTPANVTLIMRPEESPRAGQNKGRAYLELENEEETLKALSISGRSMGDRWVSIARL-----DAPLEECRT-------ISVRGLK-GISEEDFKQFLEEESG--VAPVSVRVVPDNPVRNQSGLAFAEFESPEDAKKVLSLDGINIMSRWIDV-------------------------SLQTMKKRVREPRTGADSAPPFGEDAKGGIVMVLKGLPFSLSDDEIKAFLLQYDITEEEMVQMKVPKHNNTNSNTGIAFLHLKDEAAADKVMALRGSYIGDRWVDV 450
            +F VQV G+ +S S +++  +F +  +      + +  +   R G++ GRA++ELE+EE+  KAL    + +G R+V ++ +     +A L +  T       + +RGL     ++D  QF    SG  +A   + VV D+  RN SG AF +F S E A   L  D   I +R+I+V                         S+Q   + V   +T   +  P    A    +  ++GLPF  S ++I  F     +++   + ++       N   G+ F   +D AAA   M     YIG+R+V++
Sbjct:   92 LFIVQVKGLPWSCSAQDLMHFFSECRIRDGLKGIHLTVD---RLGRSSGRAFIELEHEEDVNKALEKHRQYLGPRYVEVSEVTNSDAEAILNKAVTAPAESWVVKLRGLPFSCCQDDIVQFF---SGLDIAENGITVVTDHRGRN-SGEAFVQFGSQEAADGALQRDRDVIGNRYIEVFPSTSEEIHSSWRKKKGMSSGSAQSSVQPGNRNVSSAQTNHRTGSPLSSTAPLHYIH-MRGLPFQASGEDIVKFFSPLAVSK---ILIECGADGRRNGEAGVYFTSHQDAAAA---MTRDRQYIGERYVEL 386          
BLAST of mRNA_F-distichus_contig9844.19279.1 vs. uniprot
Match: A0A1A7WY58_9TELE (G-rich RNA sequence binding factor 1 n=1 Tax=Iconisemion striatum TaxID=60296 RepID=A0A1A7WY58_9TELE)

HSP 1 Score: 73.6 bits (179), Expect = 2.650e-10
Identity = 68/246 (27.64%), Postives = 117/246 (47.56%), Query Frame = 0
Query:  182 IFQVQVDGIAFSVSREEVEEWFRDAGVTPANVTLIMRPEESPRAGQNKGRAYLELENEEETLKALSISGRSMGDRWVSIARL-----DAPLEECR-------TISVRGLK-GISEEDFKQFLEEESGVAPVS--VRVVPDNPVRNQSGLAFAEFESPEDAKKVLSLDGINIMSRWIDV-------------------SLQTMKKRVREPRTGADSAPPFGEDAKGGIVMVLKGLPFSLSDDEIKAF 393
            ++ VQV G+ +S + +++ ++F D G+      + +  +   R G+  GRA++E+E+EE+  KAL    + +G R+V +  +     +A L++          + +RGL     E+D   F    SG+  V   + +V DN  ++ SG AF +F S E+A K L  D   I  R+I+V                   S Q  ++ V  P+T   + PP   +     V  L+GLPF +S ++I  F
Sbjct:   97 VYIVQVKGLPWSCTAQDLLQFFSDCGIRAGENGIHLTQD---RLGRPSGRAFIEMEHEEDVSKALEKHRQYLGSRYVEVFEVTNSDAEAILKKSSDTRADNAVVLLRGLPFSCREDDLINFF---SGLNIVENGITIVTDNKGKS-SGEAFVQFSSQEEADKALLRDRELIGHRYIEVFPSSRDQIHSSWRRRSLNCSHQANRRTVSPPQTNNRAVPPQSSNVAAHYVH-LRGLPFQVSGEDIVKF 334          
BLAST of mRNA_F-distichus_contig9844.19279.1 vs. uniprot
Match: A0A1A8B945_NOTFU (G-rich RNA sequence binding factor 1 n=7 Tax=Nothobranchius TaxID=28779 RepID=A0A1A8B945_NOTFU)

HSP 1 Score: 73.2 bits (178), Expect = 3.490e-10
Identity = 72/303 (23.76%), Postives = 137/303 (45.21%), Query Frame = 0
Query:  182 IFQVQVDGIAFSVSREEVEEWFRDAGVTPANVTLIMRPEESPRAGQNKGRAYLELENEEETLKALSISGRSMGDRWVSIARL-DAPLE-----------ECRTISVRGLK-GISEEDFKQFLEEESG--VAPVSVRVVPDNPVRNQSGLAFAEFESPEDAKKVLSLDGINIMSRWIDV-------------------SLQTMKKRVREPRTGADSAPPFGEDAKGGIVMVLKGLPFSLSDDEIKAFLLQYDITEEEMVQMKVPKHNNTNSNTGIAFLHLKDEAAADKVMALRGSYIGDRWVDV 450
            ++ VQV G+ +S + +++ ++F D  +      + +  +   R G+  GRA++E+E+E++ ++AL    + +G R+V +  + D+  E           +   + +RGL     E+D   F    SG  +A   + +V DN  +N SG AF +F S E+A K L  D   I  R+I+V                   S Q  ++ +  P+T   + PP   D     +  L+GLPF +S ++I  F     +++   + ++       +    + F   +D   A     L+   IG R++++
Sbjct:   95 VYLVQVKGLPWSCTAQDLLQFFSDCRIHAGEKGIHLIED---RPGRPSGRAFIEMEHEQDVVRALGKHRQYLGSRYVEVFEVTDSDAEAILKKPSGTRADDAVVLLRGLPFSCKEDDIINFF---SGLDIAEGGITIVADNRGKN-SGDAFVQFSSVEEANKALQRDREFIGHRYIEVFPSSRSQIHSSWRMRGSLNSSQQDRRTISPPQTNTKAVPPEMSDVPNHYLH-LRGLPFQVSGEDIVKFFSPLKVSK---ILLECGPDGRLSGEADVFFSSHEDAVTAMSRDRLK---IGHRYIEL 383          
BLAST of mRNA_F-distichus_contig9844.19279.1 vs. uniprot
Match: A0A3Q3MSB1_9LABR (G-rich RNA sequence binding factor 1 n=1 Tax=Labrus bergylta TaxID=56723 RepID=A0A3Q3MSB1_9LABR)

HSP 1 Score: 70.1 bits (170), Expect = 1.670e-9
Identity = 69/234 (29.49%), Postives = 110/234 (47.01%), Query Frame = 0
Query:  182 IFQVQVDGIAFSVSREEVEEWFRDAGVTPANVTLIMRPEESPRAGQNKGRAYLELENEEETLKALSISGRSMGDRWVSIARLDAPLEECRTISVRGLK-GISEEDFKQFLEEESGVAPVS--VRVVPDNPVRNQSGLAFAEFESPEDAKKVLSLDGINIMSRWIDV-------------------SLQT---MKKRVREPRTGADSAPPFGEDAKGGIVMVLKGLPFSLSDDEI 390
            +F VQV G+ +S S +++ ++F +  +      + +  +   R G+  GRA+LELE+EE+  KAL    + +G R+V    L +P  E   + +RGL    +E D  QF    SG+  V   + +V +   +N SG A+ +F S E A K L  D   I +R+I+V                   S QT   M      PRTG   +      A     + ++GLPF +S ++I
Sbjct:   10 VFIVQVKGLPWSCSVQDLLQFFSECRIRDGEKGIHLPLD---RMGRPSGRAFLELEHEEDVSKALEKHRQYLGPRYVEGLSLWSPTSEDGVVRLRGLPFSCNEADVVQFF---SGLDIVQNGITLVKNTKGKN-SGEAYVQFSSQEAANKALQRDREVIGNRYIEVFPSKRAEIRTEWQRRSSSSSPQTSYQMPLNQAYPRTGEGISDLLFSSAPPVHFIHMRGLPFQVSGEDI 236          
BLAST of mRNA_F-distichus_contig9844.19279.1 vs. uniprot
Match: A0A3B3BRV8_ORYME (G-rich sequence factor 1 n=1 Tax=Oryzias melastigma TaxID=30732 RepID=A0A3B3BRV8_ORYME)

HSP 1 Score: 70.9 bits (172), Expect = 1.790e-9
Identity = 81/304 (26.64%), Postives = 135/304 (44.41%), Query Frame = 0
Query:  182 IFQVQVDGIAFSVSREEVEEWFRDAGVTPANVTLIMRPEESPRAGQNKGRAYLELENEEETLKALSISGRSMGDRWVSIARL---DA---------PLEECRTISVRGLK-GISEEDFKQFLEEESGVAPVS--VRVVPDNPVRNQSGLAFAEFESPEDAKKVLSLDGINIMSRWIDVS-------LQTMKKRVREPRTGAD--------SAP-----PFGEDAKGGIVMVLKGLPFSLSDDEIKAFLLQYDITEEEMVQMKVPKHNNTNSNTGIAFLHLKDEAAADKVMALRGSYIGDRWVDV 450
            +F VQV G+ +S S +++  +F +  +      + +  +   R G+  GRA++E+E+EE+  KAL    + +G R+V ++ +   DA         P  E   + +RGL    SE+D   F    SG+  V   V +V D   RN SG AF +F S E+A K L      +  R+I+V          T K+R   P             SAP     P   +A    +  ++GLPF  S ++I  F   Y +++   + ++       N    + F   +D  AA   M+     IG R++++
Sbjct:   79 VFIVQVKGLPWSCSVQDLLRFFSECRIRDGERGVHLTVD---RLGRPSGRAFIEMEHEEDVSKALEKHRQYLGPRYVEVSEVTNSDAEAILQHAAPPPAEDGVVKLRGLPFSCSEDDVLHFF---SGLDVVENGVTMVTDGRGRN-SGEAFVQFSSQEEAGKALQKHREMMGHRYIEVFPSRSSEIRSTWKRRTSPPPQSXXXXXAGRPASAPHRPVSPQSSEASRHFIH-MRGLPFQTSGEDISKFFSPYVVSK---IMIECGPDGRPNGEADVYFSCHRDAVAA---MSRDRMNIGHRYIEL 368          
BLAST of mRNA_F-distichus_contig9844.19279.1 vs. uniprot
Match: UPI001FAD196E (G-rich sequence factor 1 n=1 Tax=Girardinichthys multiradiatus TaxID=208333 RepID=UPI001FAD196E)

HSP 1 Score: 70.9 bits (172), Expect = 2.040e-9
Identity = 63/245 (25.71%), Postives = 118/245 (48.16%), Query Frame = 0
Query:  182 IFQVQVDGIAFSVSREEVEEWFRDAGVTPANVTLIMRPEESPRAGQNKGRAYLELENEEETLKALSISGRSMGDRWVSIARL---DAPL---------EECRTISVRGLK-GISEEDFKQFLEEESGVAPVSVRVVPDNPVRNQSGLAFAEFESPEDAKKVLSLDGINIMSRWIDV------SLQTMKKRVREPRTGADSA-----PPFGEDAKGGIVMV---------LKGLPFSLSDDEIKAF 393
            ++ VQV G+ +S + +++ ++F D  +      + +  +   R G+  GRA++E+E+EE+  KAL    + +G R+V +  +   DA +          E   + +RGL    +E+D   F  +   +A   + ++ ++  +N SG AF +F S E+A K L  D   I  R+I+V      ++Q  ++R R     + SA     P    + +GG   +         ++GLPF +S ++I  F
Sbjct:  102 VYIVQVKGLPWSCTAQDLLQFFSDCRIHDGEKGIHLTLD---RVGRPSGRAFIEMEHEEDVSKALEKHRQYLGPRYVEVYEVTNCDAEVILNKAAATGAEDGVVLLRGLPFSCTEDDIAHFFSD-LNIAENGITIITNSRGKN-SGEAFVQFSSQEEADKALQKDRELIGHRYIEVFPSNRDNIQAARRRTRMSLNPSQSASRRPVPDSHTNHRGGSYQISDASTHYIHMRGLPFQVSGEDIVKF 341          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig9844.19279.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVS6_ECTSI5.350e-13450.38G-rich sequence factor 1 n=1 Tax=Ectocarpus silicu... [more]
A0A6H5KVQ1_9PHAE2.040e-13244.01Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI00097DE4AF6.120e-1327.15G-rich sequence factor 1-like n=1 Tax=Paralichthys... [more]
UPI001FB7E9958.040e-1225.99G-rich sequence factor 1 isoform X1 n=2 Tax=Mugil ... [more]
UPI00159BFBA71.520e-1126.21G-rich sequence factor 1 n=2 Tax=Hippoglossus TaxI... [more]
A0A1A7WY58_9TELE2.650e-1027.64G-rich RNA sequence binding factor 1 n=1 Tax=Iconi... [more]
A0A1A8B945_NOTFU3.490e-1023.76G-rich RNA sequence binding factor 1 n=7 Tax=Notho... [more]
A0A3Q3MSB1_9LABR1.670e-929.49G-rich RNA sequence binding factor 1 n=1 Tax=Labru... [more]
A0A3B3BRV8_ORYME1.790e-926.64G-rich sequence factor 1 n=1 Tax=Oryzias melastigm... [more]
UPI001FAD196E2.040e-925.71G-rich sequence factor 1 n=1 Tax=Girardinichthys m... [more]

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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 375..451
e-value: 3.1E-7
score: 40.0
coord: 272..345
e-value: 3.5E-7
score: 39.9
coord: 184..261
e-value: 0.03
score: 20.1
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 280..340
e-value: 4.2E-7
score: 29.7
coord: 378..446
e-value: 2.0E-4
score: 21.1
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 374..455
score: 9.388
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 271..349
score: 11.213
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 183..265
score: 9.422
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 184..265
e-value: 6.3E-12
score: 47.4
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 266..360
e-value: 2.3E-11
score: 45.4
coord: 361..461
e-value: 2.3E-12
score: 48.7
NoneNo IPR availablePANTHERPTHR13976:SF22AT27789Pcoord: 273..452
coord: 413..514
coord: 157..262
NoneNo IPR availablePANTHERPTHR13976HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN-RELATEDcoord: 273..452
coord: 413..514
coord: 157..262
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 266..355
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 378..513
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 178..261

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000504RNA recognition motif domainSMARTSM00360rrm1_1coord: 375..451
e-value: 3.1E-7
score: 40.0
coord: 272..345
e-value: 3.5E-7
score: 39.9
coord: 184..261
e-value: 0.03
score: 20.1
IPR000504RNA recognition motif domainPFAMPF00076RRM_1coord: 280..340
e-value: 4.2E-7
score: 29.7
coord: 378..446
e-value: 2.0E-4
score: 21.1
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 374..455
score: 9.388
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 271..349
score: 11.213
IPR000504RNA recognition motif domainPROSITEPS50102RRMcoord: 183..265
score: 9.422
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 184..265
e-value: 6.3E-12
score: 47.4
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyGENE3D3.30.70.330coord: 266..360
e-value: 2.3E-11
score: 45.4
coord: 361..461
e-value: 2.3E-12
score: 48.7
NoneNo IPR availablePANTHERPTHR13976:SF22AT27789Pcoord: 273..452
coord: 413..514
coord: 157..262
NoneNo IPR availablePANTHERPTHR13976HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN-RELATEDcoord: 273..452
coord: 413..514
coord: 157..262
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 266..355
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 378..513
IPR035979RNA-binding domain superfamilySUPERFAMILY54928RNA-binding domain, RBDcoord: 178..261

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig9844contigF-distichus_contig9844:5847..10704 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig9844.19279.1mRNA_F-distichus_contig9844.19279.1Fucus distichus monoicousmRNAF-distichus_contig9844 5847..10704 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig9844.19279.1 ID=prot_F-distichus_contig9844.19279.1|Name=mRNA_F-distichus_contig9844.19279.1|organism=Fucus distichus monoicous|type=polypeptide|length=571bp
RRPRQASLSKFLMTSLIRTFARGAPRATGLVARGSAYVRPTRARGVRILL
TRPLSGLYRAQPHRISVDYRACGPQQTGSALAQSSGCLTQPQRDQLRRPM
SFQSDNHHHVPSQDAVPTEENTPSVDVTADDASTPEDTDTAAIETDGDYA
TTEAEGAAAQATGSAEDGEDGDMASGNAPAPIFQVQVDGIAFSVSREEVE
EWFRDAGVTPANVTLIMRPEESPRAGQNKGRAYLELENEEETLKALSISG
RSMGDRWVSIARLDAPLEECRTISVRGLKGISEEDFKQFLEEESGVAPVS
VRVVPDNPVRNQSGLAFAEFESPEDAKKVLSLDGINIMSRWIDVSLQTMK
KRVREPRTGADSAPPFGEDAKGGIVMVLKGLPFSLSDDEIKAFLLQYDIT
EEEMVQMKVPKHNNTNSNTGIAFLHLKDEAAADKVMALRGSYIGDRWVDV
SRYGDGTKSPRLSHKAAIENARSTVPAALRKKYPDLPCVVVSGLPFHKSK
TDVTEYLAEQGVPETAVEEMQMPLFLSTQNNTGACWLVINEASYGGYAYN
RIMSLNGAIMDDRWVTIADA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000504RRM_dom
IPR012677Nucleotide-bd_a/b_plait_sf
IPR035979RBD_domain_sf