prot_F-distichus_contig98027.19239.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig98027.19239.1
Unique Nameprot_F-distichus_contig98027.19239.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length159
Homology
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BLAST of mRNA_F-distichus_contig98027.19239.1 vs. uniprot
Match: A0A6H5K0E6_9PHAE (PH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0E6_9PHAE)

HSP 1 Score: 131 bits (330), Expect = 1.750e-32
Identity = 83/158 (52.53%), Postives = 100/158 (63.29%), Query Frame = 0 
Query:   28 KESNPIGGAEDLGTLTRSLWSGLGKTGD-------------------FAGGDGGGKRLVGQASVAGGYWGDE-------ETRSRLIAFADTLRAGESALSPAVFDAGGGRRSEVKIYFALMHLHPLDVRITYRSTPGSEVQDAEELTLSTMTQLDNAR 159
            K+S    G  ++G  TR+LW+ LG  GD                    AG  G G+    ++S  GG  G           R+RL+AFA+TL AGESALSP VF+ GGG+R+EVKIYFALMHLHPLDVRITYR TPGS+VQDAEELTLSTM QL++AR
Sbjct: 2076 KDSRRSRGGINIGDYTRTLWNSLG-AGDNAAXXXXXXXXXXXXXXXXXAGRGGTGESGEARSSSCGGGEGRRYLVESANSNRTRLLAFAETLAAGESALSPGVFEVGGGQRAEVKIYFALMHLHPLDVRITYRGTPGSDVQDAEELTLSTMAQLNDAR 2232
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BLAST of mRNA_F-distichus_contig98027.19239.1 vs. uniprot
Match: D8LME1_ECTSI (Similarities to vacuolar protein sorting-associated protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LME1_ECTSI)

HSP 1 Score: 128 bits (321), Expect = 2.520e-31
Identity = 63/77 (81.82%), Postives = 72/77 (93.51%), Query Frame = 0 
Query:   83 RSRLIAFADTLRAGESALSPAVFDAGGGRRSEVKIYFALMHLHPLDVRITYRSTPGSEVQDAEELTLSTMTQLDNAR 159
            R+RL+AFA+TL AGESALSP VF+ GGG+R+EVKIYFALMHLHPLDVRITYR TPGS+VQDAEELTLSTM QL++AR
Sbjct:  114 RTRLLAFAETLAAGESALSPGVFEVGGGQRAEVKIYFALMHLHPLDVRITYRGTPGSDVQDAEELTLSTMAQLNDAR 190
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig98027.19239.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K0E6_9PHAE1.750e-3252.53PH domain-containing protein n=1 Tax=Ectocarpus sp... [more]
D8LME1_ECTSI2.520e-3181.82Similarities to vacuolar protein sorting-associate... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig98027contigF-distichus_contig98027:6..1893 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig98027.19239.1mRNA_F-distichus_contig98027.19239.1Fucus distichus monoicousmRNAF-distichus_contig98027 6..1922 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig98027.19239.1 ID=prot_F-distichus_contig98027.19239.1|Name=mRNA_F-distichus_contig98027.19239.1|organism=Fucus distichus monoicous|type=polypeptide|length=159bp
MRLREKFGVKPSRSGGSSNITSKRGSGKESNPIGGAEDLGTLTRSLWSGL
GKTGDFAGGDGGGKRLVGQASVAGGYWGDEETRSRLIAFADTLRAGESAL
SPAVFDAGGGRRSEVKIYFALMHLHPLDVRITYRSTPGSEVQDAEELTLS
TMTQLDNAR
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