prot_F-distichus_contig9790.19230.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-distichus_contig9790.19230.1
Unique Name	prot_F-distichus_contig9790.19230.1
Type	polypeptide
Organism	Fucus distichus monoicous (Fucus distichus monoicous)
Sequence length	423

Homology

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BLAST of mRNA_F-distichus_contig9790.19230.1 vs. uniprot
Match: D7FNR8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNR8_ECTSI)

HSP 1 Score: 109 bits (273), Expect = 2.820e-23
Identity = 113/341 (33.14%), Postives = 152/341 (44.57%), Query Frame = 0

Query:   92 SMTWHAVRRQQAHGAH--HVGTHNPTPPAVAFAAYHSTHDAVSLRCCTGGSSSS---RNRRRGSPFVAVSDAYKPARAWLYPN-LGRGGGEVVHVRSS-SFV-WPERLNPAADPRKLPLDISLSPLIVPLNAADCKDQSRAQGMTHRREEKKTEDETRVADAKPKQAEEMEQEIAESNTPWRQLQVAANSNASPGHRRRVTWSGSVQTREVDR----NKSSDVFSPDLLALKVARQLAVLTGDPELARIVEAVTSIRRRAAGVIRSHSARHDWNGSLDGLEKVCLVWTCKEVACLRELDELVRQAVYIGDPTDAGEDRSAQDVRELKATYREARRTMEDAE 420
            S   +  RRQ+++ +H  H   H+  P + A    H      +     GG       R RRRGSPF A+S+AYKPARA ++     R GGEV+ +RSS SFV WP    P      LP D        P   A  + Q                          +                           S  HR+ V+W   V  R V R       +DV+SPDL A+++A++LAV   +PEL R    V   RR AA V+RS ++    NG LDG+E+ C ++  +E   LRE DELVR  V  G     GE    ++V  LK+++R ARR MEDAE
Sbjct:    2 SSPSYLTRRQRSYASHASHNNPHSLEPFSAALIPNHERGTLQTFPGAGGGXXXXXXPRGRRRGSPFAALSEAYKPARAPVFSRPRRRDGGEVLGLRSSCSFVAWPR---PGGGDGLLPADPRHVQQKRPQRQAGAEVQIITXXXXXXXXXXXXXXXXXXXXXLGRWXXXXXXXXXXXXXXXXXXXXXXXXXXSRSHRKSVSWPEDV-IRSVHRFPVAASQADVYSPDLQAVEIAKELAVRARNPELRRAALQVDYCRRHAAQVVRSMTSAQ--NGGLDGVEEACRLYGWREETFLRETDELVRSIVVEG-----GE----KEVWRLKSSFRAARRRMEDAE 327

The following BLAST results are available for this feature:

BLAST of mRNA_F-distichus_contig9790.19230.1 vs. uniprot

BLAST of mRNA_F-distichus_contig9790.19230.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
D7FNR8_ECTSI	2.820e-23	33.14	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]

InterPro

Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 402..422

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 402..422

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-distichus_contig9790	contig	F-distichus_contig9790:4171..6096 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Fucus distichus monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-distichus_contig9790.19230.1	mRNA_F-distichus_contig9790.19230.1	Fucus distichus monoicous	mRNA	F-distichus_contig9790 4171..6096 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-distichus_contig9790.19230.1 ID=prot_F-distichus_contig9790.19230.1|Name=mRNA_F-distichus_contig9790.19230.1|organism=Fucus distichus monoicous|type=polypeptide|length=423bp
QTHHNQLPRYRHKEHALIRTPTAGRIDPFSQSAACGVRSPPIRSRRAISP
RAKFPVTGKNTERPSLALTPPSIGVVRSAAPGDRRVTNEPASMTWHAVRR
QQAHGAHHVGTHNPTPPAVAFAAYHSTHDAVSLRCCTGGSSSSRNRRRGS
PFVAVSDAYKPARAWLYPNLGRGGGEVVHVRSSSFVWPERLNPAADPRKL
PLDISLSPLIVPLNAADCKDQSRAQGMTHRREEKKTEDETRVADAKPKQA
EEMEQEIAESNTPWRQLQVAANSNASPGHRRRVTWSGSVQTREVDRNKSS
DVFSPDLLALKVARQLAVLTGDPELARIVEAVTSIRRRAAGVIRSHSARH
DWNGSLDGLEKVCLVWTCKEVACLRELDELVRQAVYIGDPTDAGEDRSAQ
DVRELKATYREARRTMEDAEFA*