prot_F-distichus_contig971.19161.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig971.19161.1
Unique Nameprot_F-distichus_contig971.19161.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length812
Homology
BLAST of mRNA_F-distichus_contig971.19161.1 vs. uniprot
Match: D7FI04_ECTSI (MYND-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI04_ECTSI)

HSP 1 Score: 593 bits (1529), Expect = 4.210e-191
Identity = 397/772 (51.42%), Postives = 469/772 (60.75%), Query Frame = 0
Query:   88 PSPLTLPLPKVRASSTSVKRAKFGGIGDAFDSCPPSAGVPGFAEEKKSAAKEPPHRSFSVDNVPQTSVFPLAAKVKEMV-AATTAWTRGRSGRRSSPRPRPPGSPGPAALSGGPPSKSSSAWRVRTASA------DGDGATVPSSSKSSSGM-----VSPWVRSASSLPSRLAATAATGGLCSPSS-----PPFVPVVEMSPAAKAP-TPHRPGPRVTKTATFYQRRSTALGALC-----LPPPSKSYLGRPAGFSVHVLVSSASCAADLPSRTGNTQVMASVSGYPRRTYYSFADRGKVARALQSGDVVLLAPGRYEARAWGLQRLVSSVEIIGAGDADACVVYNDPAELSTPQGEHYLVGVMGGGAIDGGSGCXXXXXXXXXXXXQGSDNV--DDDSDSGWEDGKIGSRARGRRSFNNRAVRVRLANLTLEQGSGHRGAIYQLGRESHLELDGCKVRCSRGGVNVDQGTCLIFDTMISGSEVFGLHIGGDGAVEHCSISDCGRGSRRGAGKGEGGGLASTDGGVSC---DVKSSSLEDDGTDVNRMAGMPAISVLQSSRARVRFNLIHGNVGHSLQLRDSPLPGGDDNHAVLVRRAEAEAEEKLRSWLGAAAALLREHLQEKHREGFIVAEGNQCNRNRRCEAADCGSRNQGAKGTEGVDAAP---------YSAAAKEATRA--------ASGKDLAQXXXXXXXXXX---FGSAGASQVCIPTAEEEGLPLPAAATMRFLAAMDEGYVGSIREENARARRRAARGGAG 811
            P P+  P P   +S T        G+   FDSCPPS G         S ++    RS SV  VPQ    PL    +E   AA  AW + R   R+SPRPRPP SPGPAALS   P KS  A+R R  SA      +G   T PS++    G        P  R+ S+L S  AA+ A+ G  S S+     PPFVP +E+SP A  P +PH PGPR+T TA FY+ R+ A  A       LPP SK+Y GRP+GFSVHVLV+SA  AADL  R    Q +        R YYSF DRG+VA AL+ GDVVL+ PGRYEARAWGLQRLVSSVEIIGAGDA  CV+YND    S P GEHYLVGVMGG     G+G             +G D V  DDDSDSG+EDG +G       SF++RAVRVRLANLTLEQGSG+RG +YQLGRESHLE+DGC V  S+GGVN+DQGTC+I D+ ISGSEVFG+HIGG+GAVEHCSI  CGRG R        G   S+     C   D         GTDVNR+  MPAIS+LQSSR RVRFN+I  N GH+LQ RD+PLPGGD  +A+L RRAEAEAEEKLRSWLG+A+ LLREHLQ +HREG +V+EGNQC+ NR C+ A C     G    E + AA                E+T            G+++ +              G+    Q C+PTAEEEGLPLPAA T+RFLAAMDEGYVGS REENAR ++R   GGAG
Sbjct:  686 PLPMEPPPPIQTSSKTGASSLADTGV---FDSCPPSTGA--------SPSEPGSQRSLSVGTVPQFLSMPLVLAAREKASAAVAAWQKDR---RNSPRPRPPVSPGPAALSQSSPLKS--AFRFRKPSAAVEHDDEGPEITPPSAATLGGGSGRKLSAPPLSRTFSALSS--AASHASPGSASRSASRTTRPPFVPTIELSPRASLPASPHAPGPRITDTAKFYRERANAAPAPAGDIGLLPPASKAYFGRPSGFSVHVLVASALSAADLGDR--QQQHLEGGGNNSPRLYYSFEDRGRVAEALRPGDVVLVTPGRYEARAWGLQRLVSSVEIIGAGDAGDCVLYNDRVS-SGPDGEHYLVGVMGGALGSAGAG------GASVPEVKGKDVVADDDDSDSGFEDGALGPANSLVHSFSSRAVRVRLANLTLEQGSGYRGTVYQLGRESHLEMDGCTVAGSKGGVNIDQGTCIICDSWISGSEVFGVHIGGEGAVEHCSIRGCGRGGRGXXXXXXXGKYLSSS--TVCNAGDEXXXXXXXXGTDVNRVGSMPAISILQSSRVRVRFNVIRDNAGHTLQYRDAPLPGGDGKYALLARRAEAEAEEKLRSWLGSASVLLREHLQGQHREGSVVSEGNQCHLNRGCDLARC----SGGGAAEEIGAAARXXXXXXXXXXXXXAESTAGEGEGLEPEVGGQEIGEEVSRDGPGGGETRTGTLRGQQTCVPTAEEEGLPLPAAMTLRFLAAMDEGYVGSRREENARLKKRKKEGGAG 1424          
BLAST of mRNA_F-distichus_contig971.19161.1 vs. uniprot
Match: A0A6H5L4X5_9PHAE (MYND-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4X5_9PHAE)

HSP 1 Score: 575 bits (1483), Expect = 2.150e-184
Identity = 382/734 (52.04%), Postives = 453/734 (61.72%), Query Frame = 0
Query:  117 FDSCPPSAGVPGFAEEKKSAAKEPPHRSFSVDNVPQTSVFPLAAKVKEMV-AATTAWTRGRSGRRSSPRPRPPGSPGPAALSGGPPSKSSSAWRVRTASADGDGA----TVPSSSKSSSGMVSPWVRSASSLPSRL-----AATAATGGLC--SPSS-PPFVPVVEMSPAAKAP-TPHRPGPRVTKTATFYQRRSTALGALC-----LPPPSKSYLGRPAGFSVHVLVSSASCAADLPSRTGNTQVMASVSGYPRRTYYSFADRGKVARALQSGDVVLLAPGRYEARAWGLQRLVSSVEIIGAGDADACVVYNDPAELSTPQGEHYLVGVMGG--GAIDGGSGCXXXXXXXXXXXXQGSDNV--DDDSDSGWEDGKIGSRARGRRSFNNRAVRVRLANLTLEQGSGHRGAIYQLGRESHLELDGCKVRCSRGGVNVDQGTCLIFDTMISGSEVFGLHIGGDGAVEHCSISDCGRGSRRGAGKGEGGGLASTDGGVSCDVKSSSLEDDGTDVNRMAGMPAISVLQSSRARVRFNLIHGNVGHSLQLRDSPLPGGDDNHAVLVRRAEAEAEEKLRSWLGAAAALLREHLQEKHREGFIVAEGNQCNRNRRCEAADCG----SRNQGAKGTEGVDAAPYSAAAKEATRAASGKDLAQXXXXXXXXXXFGSAG------------ASQVCIPTAEEEGLPLPAAATMRFLAAMDEGYVGSIREENARARRRAARGGAG 811
            FDSCPPS G         S ++    RS SV  VPQ    PL    +E   AA  AW + R   R+SPRPRPP SPGPAALS   P KS+  +R  +A+++ D      T+PSS+ ++ G  +  + SA  L   L     AA+ A+ GL   SP++ PPFVP +E+SP A  P +PH PGPR+T TA FY  R+ A  A       LPP SK+Y GRP+GFSVHVLV+SA  AADL  R  + Q +     +  R  YSF DRG+VA AL+ GDVVLL PGRYEARAWGLQRLVSSVEIIGAGDA  CV+YNDPA  S P GEHYLVGVMGG  G+  GG               +G D V  +DDSDSG+EDG +G       SF++RAVRVRLANLTLEQGSG+RGA+YQLGRESHLE+DGC V  S+GGVNVDQGTC+I D+ ISGSEVFG+HIGG+GAVEHCSI  CGRG                                 TDVNR+  MPAIS+LQSSR RVRFN+I  N GH+LQ RD+PLPGGD  +A+L RRAEAEAEEKLRSWLG+AA LLR+HLQ +HREG +V+EGNQC+ NR C+ A C     +   G                     A  G+ L                G              Q C+PTAEEEGLPLP+A T+RFLAAMDEGYVGS REENAR ++R   GGAG
Sbjct:  717 FDSCPPSTGA--------SPSEPGSQRSLSVGTVPQFLSMPLMLAAREKASAAVAAWQKDR---RNSPRPRPPVSPGPAALSQASPLKSAFRFRKPSAASEHDDEGPERTLPSSASATLGGGARKILSAPLLSRTLSALSSAASHASHGLAKASPTTRPPFVPTIELSPRASLPASPHAPGPRITDTAKFYLERAGAAPAPAGDVGLLPPASKAYFGRPSGFSVHVLVASALSAADLGDR--HQQHLEGGGSHSPRLCYSFEDRGRVAEALRPGDVVLLTPGRYEARAWGLQRLVSSVEIIGAGDAADCVLYNDPA-CSGPAGEHYLVGVMGGALGSAAGGGASVPEV--------KGKDVVADEDDSDSGFEDGALGPANSLVHSFSSRAVRVRLANLTLEQGSGYRGAVYQLGRESHLEMDGCTVVGSKGGVNVDQGTCIIRDSWISGSEVFGVHIGGEGAVEHCSIRGCGRGGXX---------XXXXXXXXXXXXXXXXXXXXXTDVNRVGSMPAISILQSSRVRVRFNVIRDNAGHTLQYRDAPLPGGDGKYALLARRAEAEAEEKLRSWLGSAAVLLRDHLQGQHREGSVVSEGNQCHLNRGCDLARCSGGGAAEEIGVXXXXXXXXXXXXXXXXXXXXAGEGEGLEPEVGGQEICEEVSRDGPGEGETRTRTLRGQQTCVPTAEEEGLPLPSAMTLRFLAAMDEGYVGSRREENARLKKR-REGGAG 1418          
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig971.19161.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FI04_ECTSI4.210e-19151.42MYND-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5L4X5_9PHAE2.150e-18452.04MYND-type domain-containing protein n=1 Tax=Ectoca... [more]
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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 363..640

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 363..640

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig971contigF-distichus_contig971:380..3292 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig971.19161.1mRNA_F-distichus_contig971.19161.1Fucus distichus monoicousmRNAF-distichus_contig971 307..4365 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig971.19161.1 ID=prot_F-distichus_contig971.19161.1|Name=mRNA_F-distichus_contig971.19161.1|organism=Fucus distichus monoicous|type=polypeptide|length=812bp
MVDTRSVATVRQQEGGEEELEKDETSADSIAGSPIPHPDKMREEAQGKET
RRAAGSDCSEIWADGVGEGLLSLTEGEDVFHTAVHMEPSPLTLPLPKVRA
SSTSVKRAKFGGIGDAFDSCPPSAGVPGFAEEKKSAAKEPPHRSFSVDNV
PQTSVFPLAAKVKEMVAATTAWTRGRSGRRSSPRPRPPGSPGPAALSGGP
PSKSSSAWRVRTASADGDGATVPSSSKSSSGMVSPWVRSASSLPSRLAAT
AATGGLCSPSSPPFVPVVEMSPAAKAPTPHRPGPRVTKTATFYQRRSTAL
GALCLPPPSKSYLGRPAGFSVHVLVSSASCAADLPSRTGNTQVMASVSGY
PRRTYYSFADRGKVARALQSGDVVLLAPGRYEARAWGLQRLVSSVEIIGA
GDADACVVYNDPAELSTPQGEHYLVGVMGGGAIDGGSGCGSGDGGGGAVA
VQGSDNVDDDSDSGWEDGKIGSRARGRRSFNNRAVRVRLANLTLEQGSGH
RGAIYQLGRESHLELDGCKVRCSRGGVNVDQGTCLIFDTMISGSEVFGLH
IGGDGAVEHCSISDCGRGSRRGAGKGEGGGLASTDGGVSCDVKSSSLEDD
GTDVNRMAGMPAISVLQSSRARVRFNLIHGNVGHSLQLRDSPLPGGDDNH
AVLVRRAEAEAEEKLRSWLGAAAALLREHLQEKHREGFIVAEGNQCNRNR
RCEAADCGSRNQGAKGTEGVDAAPYSAAAKEATRAASGKDLAQDLGGDGG
GSSFGSAGASQVCIPTAEEEGLPLPAAATMRFLAAMDEGYVGSIREENAR
ARRRAARGGAG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011050Pectin_lyase_fold/virulence