prot_F-distichus_contig97074.19160.1 (polypeptide) Fucus distichus monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-distichus_contig97074.19160.1
Unique Nameprot_F-distichus_contig97074.19160.1
Typepolypeptide
OrganismFucus distichus monoicous (Fucus distichus monoicous)
Sequence length226
Homology
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BLAST of mRNA_F-distichus_contig97074.19160.1 vs. uniprot
Match: A0A6H5KLY0_9PHAE (Importin N-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLY0_9PHAE)

HSP 1 Score: 277 bits (709), Expect = 5.180e-83
Identity = 152/217 (70.05%), Postives = 165/217 (76.04%), Query Frame = 0 
Query:   48 HISAELVRTLWPMLEAAPGRLGGSAEIIKQLFILVGKMLTSLRMVLAQQVHIPTLLKMIMDCYDERQYPCCLDVMTTAVEVYGGADEAIQHFRALLGRASARTFAA-------------------------------------LDTALRLAVACVGASDLERESARAVLVFLGQLAGRCGGQLDRYQGEVETALAPHGEVLTRLMFAALA-VSPARL 226
            HIS ELVRTLWPMLEA PGR+GGS E+++QLF+LVGK+LTSLRMVLA+QVHIPTLLKMIMD YDE QYPCCLD+MTTAVEVYG  DEA++HFRALLGRAS RTF                                       LDTALRLAVACVGA+DLERESARAVLVFLGQLAGRCGGQLDRY+GEVE ALAPHGE LTRLMFAALA  SP+ L
Sbjct:  858 HISTELVRTLWPMLEAVPGRMGGSPEVMRQLFLLVGKLLTSLRMVLARQVHIPTLLKMIMDSYDEHQYPCCLDIMTTAVEVYGSTDEAMEHFRALLGRASTRTFTVVQAAARPGEVPQLVRSYFELLFRFLIFCPAGLLASTELDTALRLAVACVGAADLERESARAVLVFLGQLAGRCGGQLDRYKGEVEAALAPHGEALTRLMFAALAGASPSLL 1074
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BLAST of mRNA_F-distichus_contig97074.19160.1 vs. uniprot
Match: A0A835YMS8_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMS8_9STRA)

HSP 1 Score: 125 bits (315), Expect = 1.650e-29
Identity = 84/216 (38.89%), Postives = 111/216 (51.39%), Query Frame = 0 
Query:   48 HISAELVRTLWPMLEAAPGRLGGSAEIIKQLFILVGKMLTSLRMVLAQQVHIPTLLKMIMDCYDERQYPCCLDVMTTAVEVYGGAD-EAIQHFRALLGRASARTFAA------------------------------------LDTALRLAVACV------GASDLERESARAVLVFLGQLAGRCGGQLDRYQGEVETALAPHGEVLTRLMFAALA 220
            H  AEL+++L P+++A  GR  GS E++ QLF+LVGK L+SLR + A Q HIP  L +++D      YPCCL+ M TAVEVY G   + ++HF  LL R  A TF                                      L T L LAVAC+        +  ERESARAV +F+G LA RC G+LD Y  +++  L   G  L RL+   LA
Sbjct:  757 HACAELLQSLRPLVDAVAGRCQGSEEVMAQLFLLVGKALSSLRSLPALQAHIPAFLNIMLD-----HYPCCLECMGTAVEVYSGESAQVVEHFGQLLARVCAETFTYFQGRHPGAEPQLVAAFFTLAYRYLLFAPAALLQGRDLATILDLAVACLDVGGGGSGTTQERESARAVAIFVGHLAQRCSGKLDAYSQQIDAVLVDRGGALVRLILVGLA 967
The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig97074.19160.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KLY0_9PHAE5.180e-8370.05Importin N-terminal domain-containing protein n=2 ... [more]
A0A835YMS8_9STRA1.650e-2938.89Armadillo-type protein n=1 Tax=Tribonema minus Tax... [more]
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InterPro
Analysis Name: OGS1.0 of Fucus distichus monoicous
Date Performed: 2021-02-24
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 37..225
e-value: 9.1E-14
score: 52.4
NoneNo IPR availablePANTHERPTHR12363TRANSPORTIN 3 AND IMPORTIN 13coord: 38..154
NoneNo IPR availablePANTHERPTHR12363:SF48coord: 38..154

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 37..225
e-value: 9.1E-14
score: 52.4
NoneNo IPR availablePANTHERPTHR12363TRANSPORTIN 3 AND IMPORTIN 13coord: 38..154
NoneNo IPR availablePANTHERPTHR12363:SF48coord: 38..154

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-distichus_contig97074contigF-distichus_contig97074:69..1688 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Fucus distichus monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-distichus_contig97074.19160.1mRNA_F-distichus_contig97074.19160.1Fucus distichus monoicousmRNAF-distichus_contig97074 48..1688 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-distichus_contig97074.19160.1 ID=prot_F-distichus_contig97074.19160.1|Name=mRNA_F-distichus_contig97074.19160.1|organism=Fucus distichus monoicous|type=polypeptide|length=226bp
MAQAVRFLDVRDMPPAPPPGPSPRLPAAPGDGVGGGGAGEWSGQPRPHIS
AELVRTLWPMLEAAPGRLGGSAEIIKQLFILVGKMLTSLRMVLAQQVHIP
TLLKMIMDCYDERQYPCCLDVMTTAVEVYGGADEAIQHFRALLGRASART
FAALDTALRLAVACVGASDLERESARAVLVFLGQLAGRCGGQLDRYQGEV
ETALAPHGEVLTRLMFAALAVSPARL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like