prot_F-distichus_contig96980.19150.1 (polypeptide) Fucus distichus monoicous
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Overview
Homology
BLAST of mRNA_F-distichus_contig96980.19150.1 vs. uniprot
Match: A0A151R4G2_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151R4G2_CAJCA) HSP 1 Score: 62.8 bits (151), Expect = 2.020e-9 Identity = 33/81 (40.74%), Postives = 48/81 (59.26%), Query Frame = 0
Query: 8 WISDDGASRHMTSSHDLMTNYRKCSGIART--ADGDVLPIEGVGDILLRFPSDSGAFDIQLLSIAFVPQLSHNLLSLQQFT 86
WISD GAS HMT + +++N R+CS I DG LPI G+GD +++ + + L ++ VP L+ NLLS+ Q T
Sbjct: 19 WISDTGASNHMTGTSSMLSNIRQCSSIDSVLIGDGSPLPIHGIGDSVIKQKN----ITLPLNNVLLVPNLTKNLLSVSQLT 95
BLAST of mRNA_F-distichus_contig96980.19150.1 vs. uniprot
Match: A0A2K3L0D5_TRIPR (Uncharacterized protein (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3L0D5_TRIPR) HSP 1 Score: 58.5 bits (140), Expect = 1.550e-7 Identity = 33/82 (40.24%), Postives = 46/82 (56.10%), Query Frame = 0
Query: 2 VGELESWISDDGASRHMTSSHDLMTNYRKCSG--IARTADGDVLPIEGVGDILLRFPSDSGAFDIQLLSIAFVPQLSHNLLS 81
+ E E WISD GAS HMT +++N R+CSG DG LPI G+GD ++ + + + L + VP L+ NLLS
Sbjct: 335 IAETE-WISDTGASNHMTGKTSMLSNIRQCSGTDFVLIGDGSPLPIHGIGDSFIKQKNTT----LPLHDVLLVPDLTKNLLS 411
BLAST of mRNA_F-distichus_contig96980.19150.1 vs. uniprot
Match: UPI00142DACCE (uncharacterized protein LOC117127346 n=1 Tax=Brassica campestris TaxID=3711 RepID=UPI00142DACCE) HSP 1 Score: 57.8 bits (138), Expect = 2.720e-7 Identity = 34/78 (43.59%), Postives = 47/78 (60.26%), Query Frame = 0
Query: 9 ISDDGASRHMTSSHDLMTNYRKCSGIARTADGDVLPIEGVGDILLRFPSDSGAFDIQLLSIAFVPQLSHNLLSLQQFT 86
I D GAS HM S LM++ +K +G A+GD +PIEGVG + L F DS AF ++PQ + NLLS+++ T
Sbjct: 308 IVDSGASHHMISDRSLMSDVKKATGGVMIANGDRIPIEGVGKLKL-FDKDSDAF--------YMPQFASNLLSVRKAT 376
BLAST of mRNA_F-distichus_contig96980.19150.1 vs. uniprot
Match: A0A8D9D973_BRACM ((field mustard) hypothetical protein (Fragment) n=1 Tax=Brassica campestris TaxID=3711 RepID=A0A8D9D973_BRACM) HSP 1 Score: 57.8 bits (138), Expect = 2.880e-7 Identity = 34/78 (43.59%), Postives = 47/78 (60.26%), Query Frame = 0
Query: 9 ISDDGASRHMTSSHDLMTNYRKCSGIARTADGDVLPIEGVGDILLRFPSDSGAFDIQLLSIAFVPQLSHNLLSLQQFT 86
I D GAS HM S LM++ +K +G A+GD +PIEGVG + L F DS AF ++PQ + NLLS+++ T
Sbjct: 308 IVDSGASHHMISDRSLMSDVKKATGGVMIANGDRIPIEGVGKLKL-FDKDSDAF--------YMPQFASNLLSVRKAT 376
BLAST of mRNA_F-distichus_contig96980.19150.1 vs. uniprot
Match: A0A2Z6NS08_TRISU (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6NS08_TRISU) HSP 1 Score: 57.0 bits (136), Expect = 5.590e-7 Identity = 33/82 (40.24%), Postives = 43/82 (52.44%), Query Frame = 0
Query: 2 VGELESWISDDGASRHMTSSHDLMTNYRKCSGIART--ADGDVLPIEGVGDILLRFPSDSGAFDIQLLSIAFVPQLSHNLLS 81
+ E E WISD GAS HMT ++ N R+CSG DG LPI G+GD ++ + L + VP L+ NLLS
Sbjct: 334 IAETE-WISDTGASNHMTGKTSMLHNIRQCSGTDSVLIGDGSPLPIHGIGDSFIK----QNNITLPLHDVLLVPDLTKNLLS 410
BLAST of mRNA_F-distichus_contig96980.19150.1 vs. uniprot
Match: UPI00142D92C5 (uncharacterized protein LOC117131646 n=1 Tax=Brassica campestris TaxID=3711 RepID=UPI00142D92C5) HSP 1 Score: 56.6 bits (135), Expect = 7.000e-7 Identity = 34/78 (43.59%), Postives = 47/78 (60.26%), Query Frame = 0
Query: 9 ISDDGASRHMTSSHDLMTNYRKCSGIARTADGDVLPIEGVGDILLRFPSDSGAFDIQLLSIAFVPQLSHNLLSLQQFT 86
I D GAS HM S LM++ +K +G A+GD +PIEGVG + L F DS AF ++PQ + NLLS+++ T
Sbjct: 264 IVDFGASHHMISDRSLMSDVKKATGGVMIANGDRIPIEGVGKLKL-FDKDSDAF--------YMPQFASNLLSVRKAT 332
BLAST of mRNA_F-distichus_contig96980.19150.1 vs. uniprot
Match: A0A6G0W5N4_9STRA (gag_pre-integrs domain-containing protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W5N4_9STRA) HSP 1 Score: 55.5 bits (132), Expect = 1.850e-6 Identity = 27/79 (34.18%), Postives = 41/79 (51.90%), Query Frame = 0
Query: 8 WISDDGASRHMTSSHDLMTNYRKCSGIARTADGDVLPIEGVGDILLRFPSDSGAFDIQLLSIAFVPQLSHNLLSLQQFT 86
WI D GA H + TN R G R A+G+ +PIEG G ++L + +G + L + ++P + NL SL + T
Sbjct: 325 WILDSGACDHYCKNAAWFTNLRPHDGAVRAANGEDMPIEGCGTVVLEMNTTAGIVKVTLDDVWYIPTIQFNLFSLPRVT 403
BLAST of mRNA_F-distichus_contig96980.19150.1 vs. uniprot
Match: A0A2K3MQW2_TRIPR (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Trifolium pratense TaxID=57577 RepID=A0A2K3MQW2_TRIPR) HSP 1 Score: 54.3 bits (129), Expect = 4.980e-6 Identity = 32/82 (39.02%), Postives = 45/82 (54.88%), Query Frame = 0
Query: 2 VGELESWISDDGASRHMTSSHDLMTNYRKCSGIART--ADGDVLPIEGVGDILLRFPSDSGAFDIQLLSIAFVPQLSHNLLS 81
+ E E WISD GAS HMT + +++N R+ SG DG LPI G+GD ++ + + L + VP L+ NLLS
Sbjct: 334 IAETE-WISDTGASNHMTGTASMLSNIRQSSGTDSVLIGDGSPLPIHGIGDSFIKQKN----ITLPLHDVLLVPDLTKNLLS 410
BLAST of mRNA_F-distichus_contig96980.19150.1 vs. uniprot
Match: A0A2Z6LMX1_TRISU (Uncharacterized protein n=1 Tax=Trifolium subterraneum TaxID=3900 RepID=A0A2Z6LMX1_TRISU) HSP 1 Score: 53.9 bits (128), Expect = 6.800e-6 Identity = 32/82 (39.02%), Postives = 44/82 (53.66%), Query Frame = 0
Query: 2 VGELESWISDDGASRHMTSSHDLMTNYRKCSGIART--ADGDVLPIEGVGDILLRFPSDSGAFDIQLLSIAFVPQLSHNLLS 81
+ E E WISD GAS HMT + ++ N R+ SG DG LPI G+GD ++ + + L + VP L+ NLLS
Sbjct: 334 IAETE-WISDTGASNHMTGTASMLNNIRQSSGTDSVLIGDGSPLPIHGIGDSFIKQKN----ITLPLHDVLLVPDLTKNLLS 410
BLAST of mRNA_F-distichus_contig96980.19150.1 vs. uniprot
Match: Q9FWZ5_ARATH (Putative retroelement polyprotein n=1 Tax=Arabidopsis thaliana TaxID=3702 RepID=Q9FWZ5_ARATH) HSP 1 Score: 53.9 bits (128), Expect = 6.870e-6 Identity = 35/90 (38.89%), Postives = 51/90 (56.67%), Query Frame = 0
Query: 9 ISDDGASRHMTSSHDLMTNYRKCSGIARTADGDVLPIEGVGDILLRFPSDSGAFDIQLLSIAFVPQLSHNLLSLQQFTAAHHTY--FGTN 96
+ D GAS HM S+ +L+ N G A+GD +PIEG+G++ L F DS AF F+P+ + NLLS+++ T + Y FG N
Sbjct: 330 VIDSGASHHMISNSNLLDNIEPALGHVIIANGDKVPIEGIGNLKL-FNKDSKAF--------FMPKFTSNLLSVKRTTRDLNCYAIFGPN 410 The following BLAST results are available for this feature:
BLAST of mRNA_F-distichus_contig96980.19150.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_F-distichus_contig96980.19150.1 ID=prot_F-distichus_contig96980.19150.1|Name=mRNA_F-distichus_contig96980.19150.1|organism=Fucus distichus monoicous|type=polypeptide|length=121bpback to top |